scapula Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description Either of a pair of large triangular bones lying one in each dorsal lateral scapula: part of the thorax, being the principal bone of the corresponding half of the shoulder girdle, and articulating with the corresponding clavicle or coracoid. (BRENDA Tissue and Enzyme Source Ontology, BTO_0001218)
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Genes

105 proteins co-occuring with the tissue scapula in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
NOTCH1 notch 1 2.02947
PAX1 paired box 1 1.83477
TBX15 T-box 15 1.79144
EMX2 empty spiracles homeobox 2 1.42275
ASB12 ankyrin repeat and SOCS box containing 12 1.29759
TMCO1 transmembrane and coiled-coil domains 1 1.206
ST20 suppressor of tumorigenicity 20 1.12261
SCUBE3 signal peptide, CUB domain, EGF-like 3 0.964631
RPS10 ribosomal protein S10 0.947378
MATN4 matrilin 4 0.940925
EXT2 exostosin glycosyltransferase 2 0.929335
SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 0.920771
TCAP titin-cap 0.899871
HFM1 HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) 0.89732
ALX1 ALX homeobox 1 0.881204
ESM1 endothelial cell-specific molecule 1 0.868107
UNCX UNC homeobox 0.832385
ALPP alkaline phosphatase, placental 0.806882
ACVR1 activin A receptor, type I 0.80563
PPA1 pyrophosphatase (inorganic) 1 0.798541
SVIL supervillin 0.788131
NUDT3 nudix (nucleoside diphosphate linked moiety X)-type motif 3 0.78522
PRKACA protein kinase, cAMP-dependent, catalytic, alpha 0.776494
SRCIN1 SRC kinase signaling inhibitor 1 0.773174
ALPPL2 alkaline phosphatase, placental-like 2 0.769027
ALPL alkaline phosphatase, liver/bone/kidney 0.768197
NCOA1 nuclear receptor coactivator 1 0.767783
CPZ carboxypeptidase Z 0.755777
MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1-like 0.75495
LMX1B LIM homeobox transcription factor 1, beta 0.753297
NYX nyctalopin 0.747515
PACSIN1 protein kinase C and casein kinase substrate in neurons 1 0.734323
MESP2 mesoderm posterior basic helix-loop-helix transcription factor 2 0.7335
CHRDL2 chordin-like 2 0.726507
FAM120A family with sequence similarity 120A 0.713369
ENO2 enolase 2 (gamma, neuronal) 0.704764
EXT1 exostosin glycosyltransferase 1 0.695354
PAX3 paired box 3 0.683919
MORF4 mortality factor 4 (pseudogene) 0.665995
ALX4 ALX homeobox 4 0.644884
CD99 CD99 molecule 0.630718
RARA retinoic acid receptor, alpha 0.625465
SS18 synovial sarcoma translocation, chromosome 18 0.614571
HMGA1 high mobility group AT-hook 1 0.61175
HOXC6 homeobox C6 0.607319
TEF thyrotrophic embryonic factor 0.601686
ELOVL2 ELOVL fatty acid elongase 2 0.590036
MESP1 mesoderm posterior basic helix-loop-helix transcription factor 1 0.578416
NDUFB8 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa 0.573217
TBX18 T-box 18 0.568424
RFC1 replication factor C (activator 1) 1, 145kDa 0.565631
LAX1 lymphocyte transmembrane adaptor 1 0.562441
CARD16 caspase recruitment domain family, member 16 0.562042
ATP2C1 ATPase, Ca++ transporting, type 2C, member 1 0.558856
UBAP1 ubiquitin associated protein 1 0.553683
TDG thymine-DNA glycosylase 0.542566
AMER1 APC membrane recruitment protein 1 0.512564
MEGF6 multiple EGF-like-domains 6 0.505102
TSKU tsukushi, small leucine rich proteoglycan 0.499223
EED embryonic ectoderm development 0.486716
PGRMC1 progesterone receptor membrane component 1 0.464948
SPDEF SAM pointed domain containing ETS transcription factor 0.459532
CKAP2 cytoskeleton associated protein 2 0.458759
HOXA5 homeobox A5 0.45567
SOX9 SRY (sex determining region Y)-box 9 0.452969
OMD osteomodulin 0.434523
KNTC1 kinetochore associated 1 0.433757
ASRGL1 asparaginase like 1 0.432225
FLI1 Fli-1 proto-oncogene, ETS transcription factor 0.432225
GH2 growth hormone 2 0.425344
YIPF1 Yip1 domain family, member 1 0.405176
PAX9 paired box 9 0.391931
IFITM2 interferon induced transmembrane protein 2 0.381003
BMP2K BMP2 inducible kinase 0.377621
SH3BP5 SH3-domain binding protein 5 (BTK-associated) 0.377245
CLEC2A C-type lectin domain family 2, member A 0.371994
IDS iduronate 2-sulfatase 0.371245
MX2 MX dynamin-like GTPase 2 0.368624
DCLK3 doublecortin-like kinase 3 0.366007
CDX1 caudal type homeobox 1 0.361527
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.359664
WNT7A wingless-type MMTV integration site family, member 7A 0.358919
CGA glycoprotein hormones, alpha polypeptide 0.332661
PBX1 pre-B-cell leukemia homeobox 1 0.331927
EWSR1 EWS RNA-binding protein 1 0.32205
CCRN4L CCR4 carbon catabolite repression 4-like (S. cerevisiae) 0.318042
SALL4 spalt-like transcription factor 4 0.308974
KLK4 kallikrein-related peptidase 4 0.306444
ZFPM1 zinc finger protein, FOG family member 1 0.303919
GRM4 glutamate receptor, metabotropic 4 0.298524
HEY1 hes-related family bHLH transcription factor with YRPW motif 1 0.294939
TBX5 T-box 5 0.294581
FMOD fibromodulin 0.294223
VEGFC vascular endothelial growth factor C 0.289939
PRSS21 protease, serine, 21 (testisin) 0.283191
FGFR1 fibroblast growth factor receptor 1 0.28213
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha 0.28107
EPGN epithelial mitogen 0.268482
GLI3 GLI family zinc finger 3 0.262304
NDUFA5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 0.247399
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 0.24486
TWIST1 twist family bHLH transcription factor 1 0.242983
PMP22 peripheral myelin protein 22 0.236332
UBE2K ubiquitin-conjugating enzyme E2K 0.215341
ACTA1 actin, alpha 1, skeletal muscle 0.214954