segment Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
Description One of the repeated divisions of the whole organism. (Experimental Factor Ontology, EFO_0000961)
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Genes

332 genes co-occuring with the biological term segment in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCA4 ATP-binding cassette, sub-family A (ABC1), member 4
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1
ABCC1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1
ABCG2 ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group)
ACTN4 actinin, alpha 4
ADAM10 ADAM metallopeptidase domain 10
ADAMTSL4 ADAMTS-like 4
AGTR1 angiotensin II receptor, type 1
AGXT alanine-glyoxylate aminotransferase
AJAP1 adherens junctions associated protein 1
ALK anaplastic lymphoma receptor tyrosine kinase
AMBN ameloblastin (enamel matrix protein)
APC adenomatous polyposis coli
APOA1 apolipoprotein A-I
APOE apolipoprotein E
AR androgen receptor
ARAF A-Raf proto-oncogene, serine/threonine kinase
ARL3 ADP-ribosylation factor-like 3
ASIC2 acid sensing (proton gated) ion channel 2
ASIP agouti signaling protein
ATP7A ATPase, Cu++ transporting, alpha polypeptide
AXIN1 axin 1
B2M beta-2-microglobulin
BAG1 BCL2-associated athanogene
BEST1 bestrophin 1
BMP10 bone morphogenetic protein 10
BMP2 bone morphogenetic protein 2
BMP5 bone morphogenetic protein 5
BMPR1A bone morphogenetic protein receptor, type IA
BRAF B-Raf proto-oncogene, serine/threonine kinase
BRCA1 breast cancer 1, early onset
BST2 bone marrow stromal cell antigen 2
C1QTNF5 C1q and tumor necrosis factor related protein 5
C3 complement component 3
C5 complement component 5
C8A complement component 8, alpha polypeptide
C8G complement component 8, gamma polypeptide
CALM1 calmodulin 1 (phosphorylase kinase, delta)
CAMP cathelicidin antimicrobial peptide
CAV1 caveolin 1, caveolae protein, 22kDa
CCHCR1 coiled-coil alpha-helical rod protein 1
CCNT1 cyclin T1
CD36 CD36 molecule (thrombospondin receptor)
CD69 CD69 molecule
CDK9 cyclin-dependent kinase 9
CDY2A chromodomain protein, Y-linked, 2A
CEBPB CCAAT/enhancer binding protein (C/EBP), beta
CELF1 CUGBP, Elav-like family member 1
CETN2 centrin, EF-hand protein, 2
CFTR cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
CHRDL1 chordin-like 1
CLCA2 chloride channel accessory 2
CLCN1 chloride channel, voltage-sensitive 1
CLU clusterin
CNGB1 cyclic nucleotide gated channel beta 1
CNN1 calponin 1, basic, smooth muscle
CNP 2',3'-cyclic nucleotide 3' phosphodiesterase
COCH cochlin
COL3A1 collagen, type III, alpha 1
COL4A1 collagen, type IV, alpha 1
COPS5 COP9 signalosome subunit 5
CRHR1 corticotropin releasing hormone receptor 1
CRP C-reactive protein, pentraxin-related
CSNK2A1 casein kinase 2, alpha 1 polypeptide
CST3 cystatin C
CST8 cystatin 8 (cystatin-related epididymal specific)
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
CTSL cathepsin L
CXCL8 chemokine (C-X-C motif) ligand 8
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1
DAB1 Dab, reelin signal transducer, homolog 1 (Drosophila)
DAZAP1 DAZ associated protein 1
DCN decorin
DES desmin
DLG1 discs, large homolog 1 (Drosophila)
DNAJA3 DnaJ (Hsp40) homolog, subfamily A, member 3
DNAJC19 DnaJ (Hsp40) homolog, subfamily C, member 19
DRD2 dopamine receptor D2
EDN1 endothelin 1
EDNRA endothelin receptor type A
EDNRB endothelin receptor type B
EFEMP2 EGF containing fibulin-like extracellular matrix protein 2
EFNA1 ephrin-A1
EGF epidermal growth factor
EGFR epidermal growth factor receptor
EIF2S1 eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
EIF4A1 eukaryotic translation initiation factor 4A1
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1
ELN elastin
EP300 E1A binding protein p300
EPHA3 EPH receptor A3
EPYC epiphycan
ERG v-ets avian erythroblastosis virus E26 oncogene homolog
ERRFI1 ERBB receptor feedback inhibitor 1
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2
F10 coagulation factor X
F2R coagulation factor II (thrombin) receptor
F8 coagulation factor VIII, procoagulant component
FABP7 fatty acid binding protein 7, brain
FGA fibrinogen alpha chain
FGF19 fibroblast growth factor 19
FGF7 fibroblast growth factor 7
FGFR2 fibroblast growth factor receptor 2
FN1 fibronectin 1
FOXC1 forkhead box C1
FOXE3 forkhead box E3
FUBP1 far upstream element (FUSE) binding protein 1
GABRE gamma-aminobutyric acid (GABA) A receptor, epsilon
GABRR1 gamma-aminobutyric acid (GABA) A receptor, rho 1
GAK cyclin G associated kinase
GDF15 growth differentiation factor 15
GHRL ghrelin/obestatin prepropeptide
GHSR growth hormone secretagogue receptor
GJA1 gap junction protein, alpha 1, 43kDa
GJA5 gap junction protein, alpha 5, 40kDa
GJC1 gap junction protein, gamma 1, 45kDa
GLRA1 glycine receptor, alpha 1
GNAQ guanine nucleotide binding protein (G protein), q polypeptide
GP6 glycoprotein VI (platelet)
GPAA1 glycosylphosphatidylinositol anchor attachment 1
GSDMB gasdermin B
GSK3B glycogen synthase kinase 3 beta
GSTP1 glutathione S-transferase pi 1
HAND2 heart and neural crest derivatives expressed 2
HBB hemoglobin, beta
HCN2 hyperpolarization activated cyclic nucleotide gated potassium channel 2
HCN4 hyperpolarization activated cyclic nucleotide gated potassium channel 4
HDGFL1 hepatoma derived growth factor-like 1
HEXIM1 hexamethylene bis-acetamide inducible 1
HLA-A major histocompatibility complex, class I, A
HLA-DQB1 major histocompatibility complex, class II, DQ beta 1
HLA-G major histocompatibility complex, class I, G
HMBS hydroxymethylbilane synthase
HMOX1 heme oxygenase 1
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like
HPSE heparanase
HSFY1 heat shock transcription factor, Y-linked 1
HTR4 5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled
HTT huntingtin
HVCN1 hydrogen voltage gated channel 1
HYDIN HYDIN, axonemal central pair apparatus protein
IAPP islet amyloid polypeptide
ICAM1 intercellular adhesion molecule 1
IGH immunoglobulin heavy locus
IGLC1 immunoglobulin lambda constant 1 (Mcg marker)
IL13 interleukin 13
IL15 interleukin 15
IL17A interleukin 17A
IL1B interleukin 1, beta
IL2RB interleukin 2 receptor, beta
IL6 interleukin 6
INHBB inhibin, beta B
INS insulin
INSR insulin receptor
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
ITGB2 integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)
ITGB4 integrin, beta 4
JUN jun proto-oncogene
KCNA1 potassium channel, voltage gated shaker related subfamily A, member 1
KCNA5 potassium channel, voltage gated shaker related subfamily A, member 5
KCNH1 potassium channel, voltage gated eag related subfamily H, member 1
KCNH2 potassium channel, voltage gated eag related subfamily H, member 2
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1
KCNN4 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 4
KCNQ1 potassium channel, voltage gated KQT-like subfamily Q, member 1
KCTD7 potassium channel tetramerization domain containing 7
KERA keratocan
KMT2E lysine (K)-specific methyltransferase 2E
LAMA1 laminin, alpha 1
LAT linker for activation of T cells
LCK LCK proto-oncogene, Src family tyrosine kinase
LCN2 lipocalin 2
LHCGR luteinizing hormone/choriogonadotropin receptor
LMNA lamin A/C
LMTK2 lemur tyrosine kinase 2
LNX1 ligand of numb-protein X 1, E3 ubiquitin protein ligase
LRRK2 leucine-rich repeat kinase 2
LUM lumican
MAF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog
MAPT microtubule-associated protein tau
MARCO macrophage receptor with collagenous structure
MAZ MYC-associated zinc finger protein (purine-binding transcription factor)
MB myoglobin
MBP myelin basic protein
MC1R melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)
MCHR1 melanin-concentrating hormone receptor 1
MCM7 minichromosome maintenance complex component 7
MCM8 minichromosome maintenance complex component 8
MFRP membrane frizzled-related protein
MIF macrophage migration inhibitory factor (glycosylation-inhibiting factor)
MIR124-1 microRNA 124-1
MIR124-2 microRNA 124-2
MIR124-3 microRNA 124-3
MLANA melan-A
MLH1 mutL homolog 1
MMP2 matrix metallopeptidase 2
MPDZ multiple PDZ domain protein
MSX1 msh homeobox 1
MUT methylmalonyl CoA mutase
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog
MYOC myocilin, trabecular meshwork inducible glucocorticoid response
MYP3 myopia 3 (high grade, autosomal dominant)
NF1 neurofibromin 1
NF2 neurofibromin 2 (merlin)
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
NGB neuroglobin
NKRF NFKB repressing factor
NPY2R neuropeptide Y receptor Y2
ODAM odontogenic, ameloblast asssociated
OLFM3 olfactomedin 3
OLR1 oxidized low density lipoprotein (lectin-like) receptor 1
ORAI1 ORAI calcium release-activated calcium modulator 1
OXR1 oxidation resistance 1
OXT oxytocin/neurophysin I prepropeptide
OXTR oxytocin receptor
P2RX2 purinergic receptor P2X, ligand gated ion channel, 2
P2RX7 purinergic receptor P2X, ligand gated ion channel, 7
PAPPA pregnancy-associated plasma protein A, pappalysin 1
PAX6 paired box 6
PCSK9 proprotein convertase subtilisin/kexin type 9
PDE4DIP phosphodiesterase 4D interacting protein
PDGFRB platelet-derived growth factor receptor, beta polypeptide
PECAM1 platelet/endothelial cell adhesion molecule 1
PGR progesterone receptor
PINK1 PTEN induced putative kinase 1
PITX2 paired-like homeodomain 2
PITX3 paired-like homeodomain 3
PKN2 protein kinase N2
PLCB3 phospholipase C, beta 3 (phosphatidylinositol-specific)
PLG plasminogen
PLK2 polo-like kinase 2
PLOD1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
PLP1 proteolipid protein 1
PMP22 peripheral myelin protein 22
POLL polymerase (DNA directed), lambda
POU1F1 POU class 1 homeobox 1
PPL periplakin
PPP2CB protein phosphatase 2, catalytic subunit, beta isozyme
PPP3CC protein phosphatase 3, catalytic subunit, gamma isozyme
PRNP prion protein
PROP1 PROP paired-like homeobox 1
PTGER3 prostaglandin E receptor 3 (subtype EP3)
PTGFR prostaglandin F receptor (FP)
PTGS1 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PTH1R parathyroid hormone 1 receptor
PTPN22 protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
PTPRC protein tyrosine phosphatase, receptor type, C
RARRES3 retinoic acid receptor responder (tazarotene induced) 3
RASSF1 Ras association (RalGDS/AF-6) domain family member 1
RDH8 retinol dehydrogenase 8 (all-trans)
RET ret proto-oncogene
RHBG Rh family, B glycoprotein (gene/pseudogene)
RHD Rh blood group, D antigen
RHOA ras homolog family member A
RNASE2 ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila)
RP2 retinitis pigmentosa 2 (X-linked recessive)
RPL35 ribosomal protein L35
RPL7 ribosomal protein L7
RTN1 reticulon 1
RTN4 reticulon 4
RUNX1 runt-related transcription factor 1
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
S100A7 S100 calcium binding protein A7
SAP30 Sin3A-associated protein, 30kDa
SATB1 SATB homeobox 1
SCN1A sodium channel, voltage gated, type I alpha subunit
SCN2A sodium channel, voltage gated, type II alpha subunit
SCN4A sodium channel, voltage gated, type IV alpha subunit
SCN9A sodium channel, voltage gated, type IX alpha subunit
SCNN1A sodium channel, non voltage gated 1 alpha subunit
SELE selectin E
SFTPC surfactant protein C
SHOX short stature homeobox
SLC10A2 solute carrier family 10 (sodium/bile acid cotransporter), member 2
SLC14A2 solute carrier family 14 (urea transporter), member 2
SLC15A1 solute carrier family 15 (oligopeptide transporter), member 1
SLC19A3 solute carrier family 19 (thiamine transporter), member 3
SLC22A18AS solute carrier family 22 (organic cation transporter), member 18 antisense
SLC23A2 solute carrier family 23 (ascorbic acid transporter), member 2
SLC26A5 solute carrier family 26 (anion exchanger), member 5
SLC4A1 solute carrier family 4 (anion exchanger), member 1 (Diego blood group)
SLC4A4 solute carrier family 4 (sodium bicarbonate cotransporter), member 4
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7
SLC5A5 solute carrier family 5 (sodium/iodide cotransporter), member 5
SLC6A4 solute carrier family 6 (neurotransmitter transporter), member 4
SLC9A1 solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SNCB synuclein, beta
SOS1 son of sevenless homolog 1 (Drosophila)
SP1 Sp1 transcription factor
SPESP1 sperm equatorial segment protein 1
SRPK1 SRSF protein kinase 1
SRSF1 serine/arginine-rich splicing factor 1
STIM1 stromal interaction molecule 1
TAP1 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
TAP2 transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)
TAS2R1 taste receptor, type 2, member 1
TBXA2R thromboxane A2 receptor
TFAP2B transcription factor AP-2 beta (activating enhancer binding protein 2 beta)
TG thyroglobulin
TGFB2 transforming growth factor, beta 2
TGFBI transforming growth factor, beta-induced, 68kDa
TGFBR1 transforming growth factor, beta receptor 1
TLR4 toll-like receptor 4
TNFRSF10C tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain
TNNI3 troponin I type 3 (cardiac)
TRAF1 TNF receptor-associated factor 1
TRD T cell receptor delta locus
TRIM3 tripartite motif containing 3
TRIM41 tripartite motif containing 41
TRPM2 transient receptor potential cation channel, subfamily M, member 2
TRPM8 transient receptor potential cation channel, subfamily M, member 8
TRPV1 transient receptor potential cation channel, subfamily V, member 1
TTN titin
UGT1A10 UDP glucuronosyltransferase 1 family, polypeptide A10
UGT1A9 UDP glucuronosyltransferase 1 family, polypeptide A9
UMOD uromodulin
USH1G Usher syndrome 1G (autosomal recessive)
UTS2 urotensin 2
VCAM1 vascular cell adhesion molecule 1
VCAN versican
VEGFA vascular endothelial growth factor A
VIP vasoactive intestinal peptide
VSNL1 visinin-like 1
XPC xeroderma pigmentosum, complementation group C
YY1 YY1 transcription factor
ZFP36 ZFP36 ring finger protein
ZFYVE9 zinc finger, FYVE domain containing 9