seminoma Gene Set

Dataset DISEASES Text-mining Gene-Disease Association Evidence Scores
Category disease or phenotype associations
Type disease
Description A germinoma that has_material_basis_in cells that make sperm and eggs. (Human Disease Ontology, DOID_4440)
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Genes

242 genes co-occuring with the disease seminoma in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

Symbol Name Standardized Value
AFP alpha-fetoprotein 2.00516
ALPPL2 alkaline phosphatase, placental-like 2 1.7939
ALPP alkaline phosphatase, placental 1.74233
ALPL alkaline phosphatase, liver/bone/kidney 1.69678
SOX17 SRY (sex determining region Y)-box 17 1.42454
SALL4 spalt-like transcription factor 4 1.37512
SAGE1 sarcoma antigen 1 1.32279
FAM71F2 family with sequence similarity 71, member F2 1.30532
POU5F1 POU class 5 homeobox 1 1.26516
NANOG Nanog homeobox 1.17378
KIT v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog 1.12445
SOX2 SRY (sex determining region Y)-box 2 1.1051
SLC43A1 solute carrier family 43 (amino acid system L transporter), member 1 1.03493
MAGEA4 melanoma antigen family A4 0.97212
TESK1 testis-specific kinase 1 0.9696
NANOS3 nanos homolog 3 (Drosophila) 0.963728
ALPI alkaline phosphatase, intestinal 0.955361
NRM nurim (nuclear envelope membrane protein) 0.936214
SPATA12 spermatogenesis associated 12 0.913903
GPER1 G protein-coupled estrogen receptor 1 0.882292
SPRY4 sprouty homolog 4 (Drosophila) 0.877376
DMRT1 doublesex and mab-3 related transcription factor 1 0.875738
ENTPD6 ectonucleoside triphosphate diphosphohydrolase 6 (putative) 0.872872
TSKS testis-specific serine kinase substrate 0.866731
AP2A1 adaptor-related protein complex 2, alpha 1 subunit 0.858134
ZNF354A zinc finger protein 354A 0.852402
DNMT3L DNA (cytosine-5-)-methyltransferase 3-like 0.838885
ENO2 enolase 2 (gamma, neuronal) 0.835198
GRB7 growth factor receptor-bound protein 7 0.829049
PDPN podoplanin 0.819206
MEG3 maternally expressed 3 (non-protein coding) 0.81018
PTPN23 protein tyrosine phosphatase, non-receptor type 23 0.795821
TEKT1 tektin 1 0.794181
INHA inhibin, alpha 0.757378
TP53 tumor protein p53 0.756971
GDF3 growth differentiation factor 3 0.751678
TFAP2C transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) 0.735027
TSPY1 testis specific protein, Y-linked 1 0.727738
CT45A1 cancer/testis antigen family 45, member A1 0.721673
SLC17A5 solute carrier family 17 (acidic sugar transporter), member 5 0.709169
PNMA2 paraneoplastic Ma antigen 2 0.698715
CSH1 chorionic somatomammotropin hormone 1 (placental lactogen) 0.697109
H3F3C H3 histone, family 3C 0.692697
RNF20 ring finger protein 20, E3 ubiquitin protein ligase 0.688291
TSPY3 testis specific protein, Y-linked 3 0.679499
TSPY10 testis specific protein, Y-linked 10 0.679499
CSH2 chorionic somatomammotropin hormone 2 0.67551
CGB chorionic gonadotropin, beta polypeptide 0.669936
EIF3C eukaryotic translation initiation factor 3, subunit C 0.66914
CGB8 chorionic gonadotropin, beta polypeptide 8 0.66914
COX7A1 cytochrome c oxidase subunit VIIa polypeptide 1 (muscle) 0.667947
ZNF135 zinc finger protein 135 0.665166
ZNF91 zinc finger protein 91 0.662387
SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 0.659215
RAB39B RAB39B, member RAS oncogene family 0.654858
MAGEC1 melanoma antigen family C1 0.645375
NLRP7 NLR family, pyrin domain containing 7 0.643009
DNAAF1 dynein, axonemal, assembly factor 1 0.638676
NANOS2 nanos homolog 2 (Drosophila) 0.635528
GAGE12G G antigen 12G 0.624143
BAK1 BCL2-antagonist/killer 1 0.617094
CCND2 cyclin D2 0.615529
PRMT5 protein arginine methyltransferase 5 0.610448
GAGE12I G antigen 12I 0.604981
ATF7IP activating transcription factor 7 interacting protein 0.59952
LHCGR luteinizing hormone/choriogonadotropin receptor 0.594843
TDRD1 tudor domain containing 1 0.590558
FGF4 fibroblast growth factor 4 0.585497
CTAG1A cancer/testis antigen 1A 0.582773
ACVR1B activin A receptor, type IB 0.58005
PIWIL4 piwi-like RNA-mediated gene silencing 4 0.578883
PTPRC protein tyrosine phosphatase, receptor type, C 0.574605
SNED1 sushi, nidogen and EGF-like domains 1 0.571884
CTAG1B cancer/testis antigen 1B 0.568775
PODXL podocalyxin-like 0.561392
PIWIL1 piwi-like RNA-mediated gene silencing 1 0.55518
KITLG KIT ligand 0.547419
GPC3 glypican 3 0.544318
MMP16 matrix metallopeptidase 16 (membrane-inserted) 0.542767
DNMT3B DNA (cytosine-5-)-methyltransferase 3 beta 0.537731
ABCB9 ATP-binding cassette, sub-family B (MDR/TAP), member 9 0.537344
PATZ1 POZ (BTB) and AT hook containing zinc finger 1 0.532701
HSD17B4 hydroxysteroid (17-beta) dehydrogenase 4 0.530381
MCFD2 multiple coagulation factor deficiency 2 0.522659
MAGEA3 melanoma antigen family A3 0.51842
WDR77 WD repeat domain 77 0.50459
GAGE12F G antigen 12F 0.498085
TEAD4 TEA domain family member 4 0.491215
PAX8 paired box 8 0.487407
SLC5A7 solute carrier family 5 (sodium/choline cotransporter), member 7 0.485505
CDKN2D cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) 0.474119
RNF112 ring finger protein 112 0.473361
PFKP phosphofructokinase, platelet 0.472982
MYCL v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog 0.471468
SYNPO2 synaptopodin 2 0.469197
DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked 0.467306
DRD1 dopamine receptor D1 0.463527
TTC12 tetratricopeptide repeat domain 12 0.457487
POU5F1B POU class 5 homeobox 1B 0.456355
NUTM1 NUT midline carcinoma, family member 1 0.454093
LUZP4 leucine zipper protein 4 0.452585
NASP nuclear autoantigenic sperm protein (histone-binding) 0.451454
ESR2 estrogen receptor 2 (ER beta) 0.449571
CALB2 calbindin 2 0.446182
CLEC1B C-type lectin domain family 1, member B 0.439034
TCL1A T-cell leukemia/lymphoma 1A 0.436778
NXF2 nuclear RNA export factor 2 0.435651
NXF2B nuclear RNA export factor 2B 0.435651
PCNA proliferating cell nuclear antigen 0.43227
SYCP1 synaptonemal complex protein 1 0.430017
UTF1 undifferentiated embryonic cell transcription factor 1 0.430017
CD68 CD68 molecule 0.416147
EPB41L3 erythrocyte membrane protein band 4.1-like 3 0.412779
CCNA1 cyclin A1 0.406425
STRA8 stimulated by retinoic acid 8 0.403064
STK24 serine/threonine kinase 24 0.403064
GDNF glial cell derived neurotrophic factor 0.403064
AR androgen receptor 0.402692
FTL ferritin, light polypeptide 0.402692
FTH1 ferritin, heavy polypeptide 1 0.402692
PIWIL2 piwi-like RNA-mediated gene silencing 2 0.395608
FBXO44 F-box protein 44 0.394118
NME1 NME/NM23 nucleoside diphosphate kinase 1 0.385193
IGFALS insulin-like growth factor binding protein, acid labile subunit 0.382594
CCDC6 coiled-coil domain containing 6 0.382594
PRSS50 protease, serine, 50 0.377773
INSL3 insulin-like 3 (Leydig cell) 0.364085
HSD17B1 hydroxysteroid (17-beta) dehydrogenase 1 0.349349
IGF2 insulin-like growth factor 2 0.349349
DNMT3A DNA (cytosine-5-)-methyltransferase 3 alpha 0.348981
LRRC4C leucine rich repeat containing 4C 0.347511
YBX2 Y box binding protein 2 0.34384
HSPH1 heat shock 105kDa/110kDa protein 1 0.343106
HRAS Harvey rat sarcoma viral oncogene homolog 0.339806
ART3 ADP-ribosyltransferase 3 0.339073
CYP26B1 cytochrome P450, family 26, subfamily B, polypeptide 1 0.337242
LDHA lactate dehydrogenase A 0.325916
YBX3 Y box binding protein 3 0.324823
LDHC lactate dehydrogenase C 0.317909
UVRAG UV radiation resistance associated 0.315366
WT1 Wilms tumor 1 0.312102
CLDN6 claudin 6 0.312102
AP2B1 adaptor-related protein complex 2, beta 1 subunit 0.311014
RALB v-ral simian leukemia viral oncogene homolog B 0.297651
SRY sex determining region Y 0.294772
PROK1 prokineticin 1 0.292616
FGFR3 fibroblast growth factor receptor 3 0.290821
GAGE1 G antigen 1 0.290103
ESRRB estrogen-related receptor beta 0.287952
KRT5 keratin 5, type II 0.285802
KRAS Kirsten rat sarcoma viral oncogene homolog 0.285086
GIPC1 GIPC PDZ domain containing family, member 1 0.285086
NR5A1 nuclear receptor subfamily 5, group A, member 1 0.282582
RAD17 RAD17 homolog (S. pombe) 0.280439
SYP synaptophysin 0.279367
JUP junction plakoglobin 0.278654
HMGA1 high mobility group AT-hook 1 0.278297
DDX47 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 0.277227
ESR1 estrogen receptor 1 0.273664
PDGFRA platelet-derived growth factor receptor, alpha polypeptide 0.269753
HSF4 heat shock transcription factor 4 0.269753
LIF leukemia inhibitory factor 0.269043
RAB25 RAB25, member RAS oncogene family 0.266913
CLEC11A C-type lectin domain family 11, member A 0.266203
FRMD6 FERM domain containing 6 0.264785
AHRR aryl-hydrocarbon receptor repressor 0.264077
SLC22A3 solute carrier family 22 (organic cation transporter), member 3 0.263368
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.261599
KRT18 keratin 18, type I 0.260184
GFRA1 GDNF family receptor alpha 1 0.25983
LACTB lactamase, beta 0.255946
IFNGR2 interferon gamma receptor 2 (interferon gamma transducer 1) 0.254888
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.254536
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 0.253127
CHGA chromogranin A 0.252774
RALA v-ral simian leukemia viral oncogene homolog A (ras related) 0.25207
PDE11A phosphodiesterase 11A 0.249257
LGALS1 lectin, galactoside-binding, soluble, 1 0.246098
DAZL deleted in azoospermia-like 0.245396
CCNA2 cyclin A2 0.244696
BRD2 bromodomain containing 2 0.243295
TMEM245 transmembrane protein 245 0.242595
KRT7 keratin 7, type II 0.241546
RRAS related RAS viral (r-ras) oncogene homolog 0.239101
EOMES eomesodermin 0.236312
GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2 0.233183
TET1 tet methylcytosine dioxygenase 1 0.232489
LEMD3 LEM domain containing 3 0.231448
CD4 CD4 molecule 0.230755
CA9 carbonic anhydrase IX 0.230063
EEF1A2 eukaryotic translation elongation factor 1 alpha 2 0.227642
TFDP3 transcription factor Dp family, member 3 0.223853
FUT4 fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific) 0.223509
NME2 NME/NM23 nucleoside diphosphate kinase 2 0.219398
ACPP acid phosphatase, prostate 0.216672
POU2AF1 POU class 2 associating factor 1 0.216332
OXA1L oxidase (cytochrome c) assembly 1-like 0.215992
STK26 serine/threonine protein kinase 26 0.213621
TPD52 tumor protein D52 0.212271
DSP desmoplakin 0.211934
NDUFA5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 0.211597
HSD17B1P1 hydroxysteroid (17-beta) dehydrogenase 1 pseudogene 1 0.210589
OCM2 oncomodulin 2 0.209918
AURKAIP1 aurora kinase A interacting protein 1 0.209248
KMO kynurenine 3-monooxygenase (kynurenine 3-hydroxylase) 0.208914
MXI1 MAX interactor 1, dimerization protein 0.204263
ZNF85 zinc finger protein 85 0.20229
SPRY2 sprouty homolog 2 (Drosophila) 0.199033
DAZ1 deleted in azoospermia 1 0.196459
TDG thymine-DNA glycosylase 0.194865
OCM oncomodulin 0.194232
C1QBP complement component 1, q subcomponent binding protein 0.193285
BCAM basal cell adhesion molecule (Lutheran blood group) 0.187719
HMMR hyaluronan-mediated motility receptor (RHAMM) 0.187719
SLURP1 secreted LY6/PLAUR domain containing 1 0.18651
ING1 inhibitor of growth family, member 1 0.18472
GGN gametogenetin 0.179802
XAF1 XIAP associated factor 1 0.176757
TOP2B topoisomerase (DNA) II beta 180kDa 0.176485
RGN regucalcin 0.174617
FRY furry homolog (Drosophila) 0.173571
HSPE1 heat shock 10kDa protein 1 0.172038
HLA-A major histocompatibility complex, class I, A 0.170789
GNG8 guanine nucleotide binding protein (G protein), gamma 8 0.16933
CORIN corin, serine peptidase 0.16933
PSMD10 proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 0.167915
CDH1 cadherin 1, type 1, E-cadherin (epithelial) 0.167915
APAF1 apoptotic peptidase activating factor 1 0.166995
DAZ2 deleted in azoospermia 2 0.165217
SMAD6 SMAD family member 6 0.165001
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.162109
GJA1 gap junction protein, alpha 1, 43kDa 0.161912
ADGRV1 adhesion G protein-coupled receptor V1 0.144715
PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 0.142733
ADGRA3 adhesion G protein-coupled receptor A3 0.142525
DDX19B DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 0.140538
LIPE lipase, hormone-sensitive 0.138985
FADD Fas (TNFRSF6)-associated via death domain 0.137065
XPA xeroderma pigmentosum, complementation group A 0.133801
CDX2 caudal type homeobox 2 0.130905
MNX1 motor neuron and pancreas homeobox 1 0.130079
MAP2 microtubule-associated protein 2 0.127435