shrna Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

137 genes co-occuring with the biological term shrna in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1
ACKR3 atypical chemokine receptor 3
ADAM17 ADAM metallopeptidase domain 17
ADAR adenosine deaminase, RNA-specific
AHR aryl hydrocarbon receptor
AKT1 v-akt murine thymoma viral oncogene homolog 1
ALDH1A1 aldehyde dehydrogenase 1 family, member A1
ANGPT2 angiopoietin 2
APOB apolipoprotein B
AR androgen receptor
ARNTL aryl hydrocarbon receptor nuclear translocator-like
ATF4 activating transcription factor 4
BAG1 BCL2-associated athanogene
BCL2 B-cell CLL/lymphoma 2
BIRC5 baculoviral IAP repeat containing 5
BIRC6 baculoviral IAP repeat containing 6
BRCA1 breast cancer 1, early onset
BTRC beta-transducin repeat containing E3 ubiquitin protein ligase
CAPN2 calpain 2, (m/II) large subunit
CASP3 caspase 3, apoptosis-related cysteine peptidase
CD4 CD4 molecule
CD63 CD63 molecule
CDK1 cyclin-dependent kinase 1
CDK5 cyclin-dependent kinase 5
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CHEK1 checkpoint kinase 1
CHEK2 checkpoint kinase 2
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
CNTN1 contactin 1
COX5B cytochrome c oxidase subunit Vb
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
CXCL12 chemokine (C-X-C motif) ligand 12
CXCL5 chemokine (C-X-C motif) ligand 5
CXCL8 chemokine (C-X-C motif) ligand 8
CXCR4 chemokine (C-X-C motif) receptor 4
DAXX death-domain associated protein
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
DICER1 dicer 1, ribonuclease type III
DISC1 disrupted in schizophrenia 1
DMPK dystrophia myotonica-protein kinase
ECI1 enoyl-CoA delta isomerase 1
ENDOG endonuclease G
ENOX2 ecto-NOX disulfide-thiol exchanger 2
ERBB2 erb-b2 receptor tyrosine kinase 2
ERBB3 erb-b2 receptor tyrosine kinase 3
ERCC1 excision repair cross-complementation group 1
ERCC2 excision repair cross-complementation group 2
EREG epiregulin
FOS FBJ murine osteosarcoma viral oncogene homolog
GAS7 growth arrest-specific 7
GCLM glutamate-cysteine ligase, modifier subunit
GLI1 GLI family zinc finger 1
GSTP1 glutathione S-transferase pi 1
HBEGF heparin-binding EGF-like growth factor
HES1 hes family bHLH transcription factor 1
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HMGB1 high mobility group box 1
HOXA9 homeobox A9
HSD17B7 hydroxysteroid (17-beta) dehydrogenase 7
HSF1 heat shock transcription factor 1
HSPA4 heat shock 70kDa protein 4
HTT huntingtin
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein
IDO1 indoleamine 2,3-dioxygenase 1
IGF1R insulin-like growth factor 1 receptor
IGF2BP1 insulin-like growth factor 2 mRNA binding protein 1
IL17A interleukin 17A
ITGA2B integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
JUN jun proto-oncogene
KCNA3 potassium channel, voltage gated shaker related subfamily A, member 3
KLF8 Kruppel-like factor 8
KRAS Kirsten rat sarcoma viral oncogene homolog
LDHA lactate dehydrogenase A
LGR4 leucine-rich repeat containing G protein-coupled receptor 4
MAPK14 mitogen-activated protein kinase 14
MED19 mediator complex subunit 19
MGAT1 mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
MIR221 microRNA 221
MIR636 microRNA 636
MTOR mechanistic target of rapamycin (serine/threonine kinase)
MYH9 myosin, heavy chain 9, non-muscle
MYL9 myosin, light chain 9, regulatory
NFE2L2 nuclear factor, erythroid 2-like 2
NOTCH1 notch 1
NOTCH3 notch 3
NRAS neuroblastoma RAS viral (v-ras) oncogene homolog
NUAK1 NUAK family, SNF1-like kinase, 1
OSBPL10 oxysterol binding protein-like 10
PGD phosphogluconate dehydrogenase
PIK3CB phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta
PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
PIM3 Pim-3 proto-oncogene, serine/threonine kinase
PLCE1 phospholipase C, epsilon 1
PNPT1 polyribonucleotide nucleotidyltransferase 1
PRKCB protein kinase C, beta
PRKDC protein kinase, DNA-activated, catalytic polypeptide
PROX1 prospero homeobox 1
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1
REST RE1-silencing transcription factor
RHOA ras homolog family member A
RHOC ras homolog family member C
SELE selectin E
SERPINF1 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1
SLC1A5 solute carrier family 1 (neutral amino acid transporter), member 5
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5
SMAD1 SMAD family member 1
SMAD4 SMAD family member 4
SMAD5 SMAD family member 5
SMO smoothened, frizzled class receptor
SNCG synuclein, gamma (breast cancer-specific protein 1)
SOCS1 suppressor of cytokine signaling 1
SOD1 superoxide dismutase 1, soluble
SP1 Sp1 transcription factor
SP3 Sp3 transcription factor
SPP1 secreted phosphoprotein 1
SPRR2A small proline-rich protein 2A
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
TAF4 TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa
TAL1 T-cell acute lymphocytic leukemia 1
TBX1 T-box 1
TERT telomerase reverse transcriptase
TFAP2C transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)
TLR3 toll-like receptor 3
TM4SF5 transmembrane 4 L six family member 5
TNFRSF10A tumor necrosis factor receptor superfamily, member 10a
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain
TNIP1 TNFAIP3 interacting protein 1
TP53 tumor protein p53
VDAC1 voltage-dependent anion channel 1
VEGFA vascular endothelial growth factor A
VEGFC vascular endothelial growth factor C
XRCC1 X-ray repair complementing defective repair in Chinese hamster cells 1
YBX1 Y box binding protein 1
ZNRD1 zinc ribbon domain containing 1