signature Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

280 genes co-occuring with the biological term signature in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1
ABCC1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1
ABCC2 ATP-binding cassette, sub-family C (CFTR/MRP), member 2
ACKR1 atypical chemokine receptor 1 (Duffy blood group)
ACP5 acid phosphatase 5, tartrate resistant
ADAR adenosine deaminase, RNA-specific
AICDA activation-induced cytidine deaminase
ALDH1A1 aldehyde dehydrogenase 1 family, member A1
ALK anaplastic lymphoma receptor tyrosine kinase
APC adenomatous polyposis coli
APOBEC3F apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F
APOBEC3G apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G
APOBEC3H apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H
AR androgen receptor
ARHGDIB Rho GDP dissociation inhibitor (GDI) beta
ASCL2 achaete-scute family bHLH transcription factor 2
ATM ATM serine/threonine kinase
ATR ATR serine/threonine kinase
AURKA aurora kinase A
B3GAT3 beta-1,3-glucuronyltransferase 3
BAX BCL2-associated X protein
BCL11A B-cell CLL/lymphoma 11A (zinc finger protein)
BCL2L1 BCL2-like 1
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase)
BRAF B-Raf proto-oncogene, serine/threonine kinase
BRCA1 breast cancer 1, early onset
BRCA2 breast cancer 2, early onset
BRD2 bromodomain containing 2
BRI3 brain protein I3
C1QB complement component 1, q subcomponent, B chain
C9ORF72 chromosome 9 open reading frame 72
CA9 carbonic anhydrase IX
CASP1 caspase 1, apoptosis-related cysteine peptidase
CASP3 caspase 3, apoptosis-related cysteine peptidase
CAV1 caveolin 1, caveolae protein, 22kDa
CCL5 chemokine (C-C motif) ligand 5
CD200 CD200 molecule
CD24 CD24 molecule
CD44 CD44 molecule (Indian blood group)
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1)
CDKN2A cyclin-dependent kinase inhibitor 2A
CDKN2D cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)
CEBPB CCAAT/enhancer binding protein (C/EBP), beta
CFLAR CASP8 and FADD-like apoptosis regulator
CFTR cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
CHEK2 checkpoint kinase 2
CHGA chromogranin A
CHMP2B charged multivesicular body protein 2B
CIC capicua transcriptional repressor
CLU clusterin
CREB1 cAMP responsive element binding protein 1
CRK v-crk avian sarcoma virus CT10 oncogene homolog
CRP C-reactive protein, pentraxin-related
CRTC1 CREB regulated transcription coactivator 1
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
CUX1 cut-like homeobox 1
CXCL10 chemokine (C-X-C motif) ligand 10
CXCL12 chemokine (C-X-C motif) ligand 12
CXCL8 chemokine (C-X-C motif) ligand 8
DDAH2 dimethylarginine dimethylaminohydrolase 2
DUSP1 dual specificity phosphatase 1
DUX4 double homeobox 4
DYSF dysferlin
E2F1 E2F transcription factor 1
E2F3 E2F transcription factor 3
EDN1 endothelin 1
EGFR epidermal growth factor receptor
EPAS1 endothelial PAS domain protein 1
ERBB2 erb-b2 receptor tyrosine kinase 2
ERG v-ets avian erythroblastosis virus E26 oncogene homolog
ESR1 estrogen receptor 1
ESR2 estrogen receptor 2 (ER beta)
ETV1 ets variant 1
FBLN5 fibulin 5
FGF2 fibroblast growth factor 2 (basic)
FGF8 fibroblast growth factor 8 (androgen-induced)
FLT3 fms-related tyrosine kinase 3
FOXA1 forkhead box A1
FOXM1 forkhead box M1
FOXO1 forkhead box O1
FOXO4 forkhead box O4
FOXP1 forkhead box P1
FOXP3 forkhead box P3
FUCA1 fucosidase, alpha-L- 1, tissue
G6PC glucose-6-phosphatase, catalytic subunit
G6PD glucose-6-phosphate dehydrogenase
GATA1 GATA binding protein 1 (globin transcription factor 1)
GATA3 GATA binding protein 3
GBX2 gastrulation brain homeobox 2
GLRA1 glycine receptor, alpha 1
GNL3 guanine nucleotide binding protein-like 3 (nucleolar)
GPX3 glutathione peroxidase 3
GSK3B glycogen synthase kinase 3 beta
H19 H19, imprinted maternally expressed transcript (non-protein coding)
HDAC1 histone deacetylase 1
HDAC7 histone deacetylase 7
HGF hepatocyte growth factor (hepapoietin A; scatter factor)
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HMGA2 high mobility group AT-hook 2
HMOX1 heme oxygenase 1
HOXA6 homeobox A6
HOXA9 homeobox A9
HOXB5 homeobox B5
HOXB6 homeobox B6
HOXB7 homeobox B7
HTR2A 5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled
HUNK hormonally up-regulated Neu-associated kinase
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble
IDH2 isocitrate dehydrogenase 2 (NADP+), mitochondrial
IFNA1 interferon, alpha 1
IFNA2 interferon, alpha 2
IFNB1 interferon, beta 1, fibroblast
IFNG interferon, gamma
IFNL1 interferon, lambda 1
IFNW1 interferon, omega 1
IGF1 insulin-like growth factor 1 (somatomedin C)
IKZF1 IKAROS family zinc finger 1 (Ikaros)
IL10 interleukin 10
IL13 interleukin 13
IL1B interleukin 1, beta
IL1R2 interleukin 1 receptor, type II
IL27 interleukin 27
IL6 interleukin 6
INHBA inhibin, beta A
IRF5 interferon regulatory factor 5
IRF9 interferon regulatory factor 9
ITGAV integrin, alpha V
JAK1 Janus kinase 1
JAK3 Janus kinase 3
KAT6A K(lysine) acetyltransferase 6A
KCNQ1OT1 KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)
KIF14 kinesin family member 14
KISS1 KiSS-1 metastasis-suppressor
KLF4 Kruppel-like factor 4 (gut)
KLHDC8B kelch domain containing 8B
KPNA2 karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
KRAS Kirsten rat sarcoma viral oncogene homolog
KRT16 keratin 16, type I
KRT5 keratin 5, type II
KRT6A keratin 6A, type II
KRT6B keratin 6B, type II
LCK LCK proto-oncogene, Src family tyrosine kinase
LGALS3 lectin, galactoside-binding, soluble, 3
LIN28A lin-28 homolog A (C. elegans)
LIPF lipase, gastric
LOX lysyl oxidase
LYN LYN proto-oncogene, Src family tyrosine kinase
MAPK1 mitogen-activated protein kinase 1
MAPK3 mitogen-activated protein kinase 3
MAPK8 mitogen-activated protein kinase 8
MAPRE1 microtubule-associated protein, RP/EB family, member 1
MAPT microtubule-associated protein tau
MCM9 minichromosome maintenance complex component 9
MDC1 mediator of DNA-damage checkpoint 1
MECOM MDS1 and EVI1 complex locus
MECP2 methyl CpG binding protein 2
MET MET proto-oncogene, receptor tyrosine kinase
MICA MHC class I polypeptide-related sequence A
MIR143 microRNA 143
MIR144 microRNA 144
MIR181A1 microRNA 181a-1
MIR181B1 microRNA 181b-1
MIR193B microRNA 193b
MIR195 microRNA 195
MIR199A1 microRNA 199a-1
MIR199A2 microRNA 199a-2
MIR21 microRNA 21
MIR210 microRNA 210
MIR34A microRNA 34a
MIR365A microRNA 365a
MIR365B microRNA 365b
MIR548C microRNA 548c
MIR99A microRNA 99a
MIR99B microRNA 99b
MIRLET7C microRNA let-7c
MMP14 matrix metallopeptidase 14 (membrane-inserted)
MMP28 matrix metallopeptidase 28
MS4A1 membrane-spanning 4-domains, subfamily A, member 1
MTAP methylthioadenosine phosphorylase
MTOR mechanistic target of rapamycin (serine/threonine kinase)
MUC1 mucin 1, cell surface associated
MYC v-myc avian myelocytomatosis viral oncogene homolog
MZB1 marginal zone B and B1 cell-specific protein
NANOG Nanog homeobox
NAT1 N-acetyltransferase 1 (arylamine N-acetyltransferase)
NCF1C neutrophil cytosolic factor 1C pseudogene
NDRG1 N-myc downstream regulated 1
NDRG2 NDRG family member 2
NEWENTRY Record to support submission of GeneRIFs for a gene not in Gene (human; man).
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
NOD2 nucleotide-binding oligomerization domain containing 2
NOTCH1 notch 1
NOTCH2 notch 2
NOV nephroblastoma overexpressed
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin)
NR4A2 nuclear receptor subfamily 4, group A, member 2
NRAS neuroblastoma RAS viral (v-ras) oncogene homolog
OAS1 2'-5'-oligoadenylate synthetase 1, 40/46kDa
OSM oncostatin M
PBX3 pre-B-cell leukemia homeobox 3
PDK1 pyruvate dehydrogenase kinase, isozyme 1
PEBP1 phosphatidylethanolamine binding protein 1
PGF placental growth factor
PGR progesterone receptor
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
PKD1L2 polycystic kidney disease 1-like 2 (gene/pseudogene)
PKD1L3 polycystic kidney disease 1-like 3
PLK1 polo-like kinase 1
PML promyelocytic leukemia
POU5F1 POU class 5 homeobox 1
PRL prolactin
PROM1 prominin 1
PSEN1 presenilin 1
PTEN phosphatase and tensin homolog
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PTP4A3 protein tyrosine phosphatase type IVA, member 3
PTTG1 pituitary tumor-transforming 1
RAB7A RAB7A, member RAS oncogene family
RB1 retinoblastoma 1
RECK reversion-inducing-cysteine-rich protein with kazal motifs
REL v-rel avian reticuloendotheliosis viral oncogene homolog
REST RE1-silencing transcription factor
RHOC ras homolog family member C
RNASET2 ribonuclease T2
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila)
S100A9 S100 calcium binding protein A9
SCML1 sex comb on midleg-like 1 (Drosophila)
SDC2 syndecan 2
SDHB succinate dehydrogenase complex, subunit B, iron sulfur (Ip)
SEPT7 septin 7
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1
SERPINH1 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)
SF3B1 splicing factor 3b, subunit 1, 155kDa
SIRT2 sirtuin 2
SLC20A2 solute carrier family 20 (phosphate transporter), member 2
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1
SMC1A structural maintenance of chromosomes 1A
SNAI2 snail family zinc finger 2
SNRPN small nuclear ribonucleoprotein polypeptide N
SOX9 SRY (sex determining region Y)-box 9
SP1 Sp1 transcription factor
SP3 Sp3 transcription factor
SPP1 secreted phosphoprotein 1
SST somatostatin
STAT1 signal transducer and activator of transcription 1, 91kDa
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
STAU1 staufen double-stranded RNA binding protein 1
SULT1A1 sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1
TACC1 transforming, acidic coiled-coil containing protein 1
TAGLN transgelin
TAP1 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
TAP2 transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)
TERT telomerase reverse transcriptase
TET1 tet methylcytosine dioxygenase 1
TGFA transforming growth factor, alpha
TGFB1 transforming growth factor, beta 1
THBS1 thrombospondin 1
THBS2 thrombospondin 2
THBS4 thrombospondin 4
THY1 Thy-1 cell surface antigen
TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1
TIMP1 TIMP metallopeptidase inhibitor 1
TIMP2 TIMP metallopeptidase inhibitor 2
TNFRSF13B tumor necrosis factor receptor superfamily, member 13B
TNFRSF1B tumor necrosis factor receptor superfamily, member 1B
TNFSF13B tumor necrosis factor (ligand) superfamily, member 13b
TP53 tumor protein p53
TRPM7 transient receptor potential cation channel, subfamily M, member 7
TRPV6 transient receptor potential cation channel, subfamily V, member 6
UGT3A1 UDP glycosyltransferase 3 family, polypeptide A1
UHRF1 ubiquitin-like with PHD and ring finger domains 1
VHL von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase
WDFY2 WD repeat and FYVE domain containing 2
WISP3 WNT1 inducible signaling pathway protein 3
WNT11 wingless-type MMTV integration site family, member 11
WT1 Wilms tumor 1
YAP1 Yes-associated protein 1
YARS tyrosyl-tRNA synthetase
ZBTB16 zinc finger and BTB domain containing 16
ZNF175 zinc finger protein 175