stereocilium Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles. (Gene Ontology, GO_0032420)
Similar Terms
Downloads & Tools

Genes

154 proteins co-occuring with the stereocilium cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
CDH23 cadherin-related 23 2.70994
PCDH15 protocadherin-related 15 2.44436
ESPN espin 2.12676
MYO15A myosin XVA 2.12094
MYO7A myosin VIIA 2.0889
DFNB31 deafness, autosomal recessive 31 2.08526
USH1C Usher syndrome 1C (autosomal recessive, severe) 2.0055
ATP2B2 ATPase, Ca++ transporting, plasma membrane 2 1.6769
CLRN1 clarin 1 1.56503
PTPRQ protein tyrosine phosphatase, receptor type, Q 1.43726
MYO3A myosin IIIA 1.42824
PLS1 plastin 1 1.38683
ADGRV1 adhesion G protein-coupled receptor V1 1.37851
TRIOBP TRIO and F-actin binding protein 1.35266
MYH15 myosin, heavy chain 15 1.2539
USH2A Usher syndrome 2A (autosomal recessive, mild) 1.24445
STRCP1 stereocilin pseudogene 1 1.24184
STRC stereocilin 1.24184
FSCN1 fascin actin-bundling protein 1 1.22257
ATOH1 atonal homolog 1 (Drosophila) 1.18543
MYO6 myosin VI 1.18081
MYO1C myosin IC 1.16799
USH1G Usher syndrome 1G (autosomal recessive) 1.1603
MCOLN3 mucolipin 3 1.14546
PTPRR protein tyrosine phosphatase, receptor type, R 1.14034
TMC2 transmembrane channel-like 2 1.13574
TMIE transmembrane inner ear 1.13114
TPRN taperin 1.11633
CLIC5 chloride intracellular channel 5 1.05287
POU4F3 POU class 4 homeobox 3 1.0253
GRXCR1 glutaredoxin, cysteine rich 1 0.963107
MYO3B myosin IIIB 0.931245
FSCN2 fascin actin-bundling protein 2, retinal 0.926074
ELMOD3 ELMO/CED-12 domain containing 3 0.919514
ELMOD1 ELMO/CED-12 domain containing 1 0.910647
VEZT vezatin, adherens junctions transmembrane protein 0.904602
MYO1E myosin IE 0.884705
EPS8 epidermal growth factor receptor pathway substrate 8 0.867666
LOXHD1 lipoxygenase homology domains 1 0.867206
TMC1 transmembrane channel-like 1 0.844237
TECTA tectorin alpha 0.831384
CEACAM16 carcinoembryonic antigen-related cell adhesion molecule 16 0.824959
RDX radixin 0.820829
FCHSD1 FCH and double SH3 domains 1 0.817616
ADGRG2 adhesion G protein-coupled receptor G2 0.807065
ELMOD2 ELMO/CED-12 domain containing 2 0.781869
CES5A carboxylesterase 5A 0.769539
TWF2 twinfilin actin binding protein 2 0.766349
KNCN kinocilin 0.759978
KPTN kaptin (actin binding protein) 0.747737
EPS8L2 EPS8-like 2 0.736014
CALM3 calmodulin 3 (phosphorylase kinase, delta) 0.734666
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.734217
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.734217
DFNB59 deafness, autosomal recessive 59 0.708808
EZR ezrin 0.703067
BARHL1 BarH-like homeobox 1 0.699983
PDZD7 PDZ domain containing 7 0.69427
MYH14 myosin, heavy chain 14, non-muscle 0.675499
PRICKLE1 prickle homolog 1 (Drosophila) 0.673762
ACTG1 actin gamma 1 0.662935
OTOG otogelin 0.631171
ATP6V1E1 ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1 0.620529
VANGL2 VANGL planar cell polarity protein 2 0.617982
FSCN3 fascin actin-bundling protein 3, testicular 0.617982
TBC1D24 TBC1 domain family, member 24 0.613318
MYO7B myosin VIIB 0.612471
TRPA1 transient receptor potential cation channel, subfamily A, member 1 0.601487
CNGA3 cyclic nucleotide gated channel alpha 3 0.600223
DVL2 dishevelled segment polarity protein 2 0.58134
OCM oncomodulin 0.5597
FCHSD2 FCH and double SH3 domains 2 0.558871
MSN moesin 0.553078
EMILIN1 elastin microfibril interfacer 1 0.551838
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 0.551425
TECTB tectorin beta 0.551012
FAM65B family with sequence similarity 65, member B 0.544
MYO1H myosin IH 0.543587
OCM2 oncomodulin 2 0.543176
PDE6C phosphodiesterase 6C, cGMP-specific, cone, alpha prime 0.529618
MISP mitotic spindle positioning 0.529208
DNAH8 dynein, axonemal, heavy chain 8 0.52716
C4BPA complement component 4 binding protein, alpha 0.525522
CNGA4 cyclic nucleotide gated channel alpha 4 0.525113
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.519389
CIB2 calcium and integrin binding family member 2 0.505944
CPLX3 complexin 3 0.505537
SLC9A3R2 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2 0.495395
AQP9 aquaporin 9 0.494585
LHFPL5 lipoma HMGIC fusion partner-like 5 0.49418
PLS3 plastin 3 0.493371
MIR183 microRNA 183 0.484886
C4B complement component 4B (Chido blood group) 0.476027
DOCK4 dedicator of cytokinesis 4 0.475223
MCOLN2 mucolipin 2 0.469203
EPB41L1 erythrocyte membrane protein band 4.1-like 1 0.448054
MSRB3 methionine sulfoxide reductase B3 0.443689
LRRC4C leucine rich repeat containing 4C 0.429859
EPB41 erythrocyte membrane protein band 4.1 0.427497
CALB1 calbindin 1, 28kDa 0.415337
ARL5B ADP-ribosylation factor-like 5B 0.40247
MYO1B myosin IB 0.393549
ITGA8 integrin, alpha 8 0.390455
SYBU syntabulin (syntaxin-interacting) 0.385822
CALB2 calbindin 2 0.38428
PCDH11Y protocadherin 11 Y-linked 0.380045
MBNL2 muscleblind-like splicing regulator 2 0.373516
PCDH11X protocadherin 11 X-linked 0.372366
LIG3 ligase III, DNA, ATP-dependent 0.371982
SYNJ2 synaptojanin 2 0.369301
ACTB actin, beta 0.350622
MYH9 myosin, heavy chain 9, non-muscle 0.336996
MYO1F myosin IF 0.336241
PIGY phosphatidylinositol glycan anchor biosynthesis, class Y 0.327956
EHD4 EH-domain containing 4 0.327956
ZAN zonadhesin (gene/pseudogene) 0.311478
ATP8B1 ATPase, aminophospholipid transporter, class I, type 8B, member 1 0.310358
ACPP acid phosphatase, prostate 0.303283
COBL cordon-bleu WH2 repeat protein 0.293637
TSPAN8 tetraspanin 8 0.291787
ARHGAP17 Rho GTPase activating protein 17 0.268603
SPA17 sperm autoantigenic protein 17 0.266042
ATP8A1 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 0.264215
GANAB glucosidase, alpha; neutral AB 0.260931
TRPM1 transient receptor potential cation channel, subfamily M, member 1 0.246407
DOCK2 dedicator of cytokinesis 2 0.240276
DVL3 dishevelled segment polarity protein 3 0.238119
UNC45B unc-45 homolog B (C. elegans) 0.232744
MKS1 Meckel syndrome, type 1 0.227752
EHD2 EH-domain containing 2 0.215063
TPM1 tropomyosin 1 (alpha) 0.21124
ATP2B3 ATPase, Ca++ transporting, plasma membrane 3 0.209513
NR1D1 nuclear receptor subfamily 1, group D, member 1 0.205059
ASIC2 acid sensing (proton gated) ion channel 2 0.204718
DOCK5 dedicator of cytokinesis 5 0.19307
NOTCH1 notch 1 0.192423
SHB Src homology 2 domain containing adaptor protein B 0.189222
LSS lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) 0.189222
PACSIN1 protein kinase C and casein kinase substrate in neurons 1 0.187646
NEUROG1 neurogenin 1 0.184853
STT3A STT3A, subunit of the oligosaccharyltransferase complex (catalytic) 0.183935
ENTPD2 ectonucleoside triphosphate diphosphohydrolase 2 0.182723
CNGB1 cyclic nucleotide gated channel beta 1 0.182723
OPA1 optic atrophy 1 (autosomal dominant) 0.181823
NOX3 NADPH oxidase 3 0.178011
MGAM maltase-glucoamylase 0.175466
PTPRD protein tyrosine phosphatase, receptor type, D 0.174361
ARL2 ADP-ribosylation factor-like 2 0.172735
RARG retinoic acid receptor, gamma 0.169099
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.167611
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.160254
ANK1 ankyrin 1, erythrocytic 0.158882
BDKRB1 bradykinin receptor B1 0.157397
PTK7 protein tyrosine kinase 7 (inactive) 0.157218