stimuli Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

370 genes co-occuring with the biological term stimuli in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABAT 4-aminobutyrate aminotransferase
ABCG2 ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group)
ACE angiotensin I converting enzyme
ACTA2 actin, alpha 2, smooth muscle, aorta
ACTN3 actinin, alpha 3 (gene/pseudogene)
ADAM10 ADAM metallopeptidase domain 10
ADAM15 ADAM metallopeptidase domain 15
ADAM17 ADAM metallopeptidase domain 17
ADCYAP1R1 adenylate cyclase activating polypeptide 1 (pituitary) receptor type I
ADIPOQ adiponectin, C1Q and collagen domain containing
ADM adrenomedullin
ADM2 adrenomedullin 2
AFF1 AF4/FMR2 family, member 1
AGT angiotensinogen (serpin peptidase inhibitor, clade A, member 8)
AIRE autoimmune regulator
AKAP5 A kinase (PRKA) anchor protein 5
AKT1 v-akt murine thymoma viral oncogene homolog 1
AMY1A amylase, alpha 1A (salivary)
AMY1B amylase, alpha 1B (salivary)
AMY1C amylase, alpha 1C (salivary)
ANGPT1 angiopoietin 1
ANGPTL7 angiopoietin-like 7
ANKK1 ankyrin repeat and kinase domain containing 1
ARF4 ADP-ribosylation factor 4
ASIC3 acid sensing (proton gated) ion channel 3
ATF3 activating transcription factor 3
ATG16L1 autophagy related 16-like 1 (S. cerevisiae)
ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase
ATM ATM serine/threonine kinase
ATXN2 ataxin 2
AVPR1A arginine vasopressin receptor 1A
B3GAT1 beta-1,3-glucuronyltransferase 1
BAX BCL2-associated X protein
BCL2L10 BCL2-like 10 (apoptosis facilitator)
BCL2L11 BCL2-like 11 (apoptosis facilitator)
BDKRB1 bradykinin receptor B1
BDKRB2 bradykinin receptor B2
BDNF brain-derived neurotrophic factor
BECN1 beclin 1, autophagy related
BIRC5 baculoviral IAP repeat containing 5
BIRC7 baculoviral IAP repeat containing 7
BMF Bcl2 modifying factor
BRAF B-Raf proto-oncogene, serine/threonine kinase
BRCA1 breast cancer 1, early onset
BRD2 bromodomain containing 2
CALHM1 calcium homeostasis modulator 1
CASP2 caspase 2, apoptosis-related cysteine peptidase
CASP3 caspase 3, apoptosis-related cysteine peptidase
CASR calcium-sensing receptor
CBR3 carbonyl reductase 3
CCL2 chemokine (C-C motif) ligand 2
CCL20 chemokine (C-C motif) ligand 20
CCND1 cyclin D1
CD19 CD19 molecule
CD44 CD44 molecule (Indian blood group)
CD69 CD69 molecule
CD80 CD80 molecule
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CDKN2A cyclin-dependent kinase inhibitor 2A
CFTR cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
CHUK conserved helix-loop-helix ubiquitous kinase
CLOCK clock circadian regulator
COL18A1 collagen, type XVIII, alpha 1
COMT catechol-O-methyltransferase
CREB3 cAMP responsive element binding protein 3
CRH corticotropin releasing hormone
CRHR1 corticotropin releasing hormone receptor 1
CRP C-reactive protein, pentraxin-related
CTGF connective tissue growth factor
CTSL cathepsin L
CXCL10 chemokine (C-X-C motif) ligand 10
CXCL11 chemokine (C-X-C motif) ligand 11
CXCL12 chemokine (C-X-C motif) ligand 12
CXCL8 chemokine (C-X-C motif) ligand 8
CXCR4 chemokine (C-X-C motif) receptor 4
CYP17A1 cytochrome P450, family 17, subfamily A, polypeptide 1
CYP19A1 cytochrome P450, family 19, subfamily A, polypeptide 1
CYP2A6 cytochrome P450, family 2, subfamily A, polypeptide 6
CYR61 cysteine-rich, angiogenic inducer, 61
CYTIP cytohesin 1 interacting protein
DCP1A decapping mRNA 1A
DEFB4A defensin, beta 4A
DHX32 DEAH (Asp-Glu-Ala-His) box polypeptide 32
DRD2 dopamine receptor D2
DRD3 dopamine receptor D3
DRD4 dopamine receptor D4
DUSP1 dual specificity phosphatase 1
DUSP3 dual specificity phosphatase 3
DUSP8 dual specificity phosphatase 8
EBI3 Epstein-Barr virus induced 3
ECE1 endothelin converting enzyme 1
EGF epidermal growth factor
EGFL7 EGF-like-domain, multiple 7
EGFR epidermal growth factor receptor
EGR3 early growth response 3
EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1
ELN elastin
ENO1 enolase 1, (alpha)
EPAS1 endothelial PAS domain protein 1
ERBB4 erb-b2 receptor tyrosine kinase 4
ERC1 ELKS/RAB6-interacting/CAST family member 1
ERCC6 excision repair cross-complementation group 6
F2 coagulation factor II (thrombin)
F3 coagulation factor III (thromboplastin, tissue factor)
FAAH fatty acid amide hydrolase
FAS Fas cell surface death receptor
FASN fatty acid synthase
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase
FCER1A Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide
FCGR2A Fc fragment of IgG, low affinity IIa, receptor (CD32)
FCGR2B Fc fragment of IgG, low affinity IIb, receptor (CD32)
FCGR3A Fc fragment of IgG, low affinity IIIa, receptor (CD16a)
FCGR3B Fc fragment of IgG, low affinity IIIb, receptor (CD16b)
FIGF c-fos induced growth factor (vascular endothelial growth factor D)
FLG filaggrin
FLT3LG fms-related tyrosine kinase 3 ligand
FMR1 fragile X mental retardation 1
FOXC2 forkhead box C2
FOXO3 forkhead box O3
FOXO4 forkhead box O4
FOXP3 forkhead box P3
G3BP1 GTPase activating protein (SH3 domain) binding protein 1
GABPA GA binding protein transcription factor, alpha subunit 60kDa
GCG glucagon
GDF15 growth differentiation factor 15
GDNF glial cell derived neurotrophic factor
GH1 growth hormone 1
GHR growth hormone receptor
GHRL ghrelin/obestatin prepropeptide
GIP gastric inhibitory polypeptide
GLI1 GLI family zinc finger 1
GMNN geminin, DNA replication inhibitor
GPBAR1 G protein-coupled bile acid receptor 1
GPC3 glypican 3
GRB14 growth factor receptor-bound protein 14
GSK3B glycogen synthase kinase 3 beta
HAMP hepcidin antimicrobial peptide
HBEGF heparin-binding EGF-like growth factor
HCN4 hyperpolarization activated cyclic nucleotide gated potassium channel 4
HFE2 hemochromatosis type 2 (juvenile)
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HIST1H3B histone cluster 1, H3b
HK1 hexokinase 1
HK2 hexokinase 2
HMGA2 high mobility group AT-hook 2
HMGB1 high mobility group box 1
HMOX1 heme oxygenase 1
HNF1A HNF1 homeobox A
HOPX HOP homeobox
HOXA10 homeobox A10
HSPA2 heat shock 70kDa protein 2
HTR1A 5-hydroxytryptamine (serotonin) receptor 1A, G protein-coupled
HTRA2 HtrA serine peptidase 2
HTT huntingtin
IFNG interferon, gamma
IFNGR2 interferon gamma receptor 2 (interferon gamma transducer 1)
IGF1 insulin-like growth factor 1 (somatomedin C)
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3
IKBKE inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon
IKBKG inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma
IL10 interleukin 10
IL12A interleukin 12A
IL17A interleukin 17A
IL18 interleukin 18
IL18BP interleukin 18 binding protein
IL19 interleukin 19
IL1A interleukin 1, alpha
IL1B interleukin 1, beta
IL36G interleukin 36, gamma
IL6 interleukin 6
IL7 interleukin 7
IL7R interleukin 7 receptor
ING1 inhibitor of growth family, member 1
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)
ITGA4 integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
ITGB7 integrin, beta 7
JUND jun D proto-oncogene
KCNH2 potassium channel, voltage gated eag related subfamily H, member 2
KCNK10 potassium channel, two pore domain subfamily K, member 10
KCNK3 potassium channel, two pore domain subfamily K, member 3
KIAA0226 KIAA0226
KLF2 Kruppel-like factor 2
KLF4 Kruppel-like factor 4 (gut)
KLF5 Kruppel-like factor 5 (intestinal)
KMT2A lysine (K)-specific methyltransferase 2A
LAT linker for activation of T cells
LCN2 lipocalin 2
LEP leptin
LGALS1 lectin, galactoside-binding, soluble, 1
LGALS3 lectin, galactoside-binding, soluble, 3
LOXL1 lysyl oxidase-like 1
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1
LYN LYN proto-oncogene, Src family tyrosine kinase
MADCAM1 mucosal vascular addressin cell adhesion molecule 1
MAOA monoamine oxidase A
MAP2K4 mitogen-activated protein kinase kinase 4
MAP3K11 mitogen-activated protein kinase kinase kinase 11
MAP3K3 mitogen-activated protein kinase kinase kinase 3
MAP3K5 mitogen-activated protein kinase kinase kinase 5
MAP3K7 mitogen-activated protein kinase kinase kinase 7
MAPK1 mitogen-activated protein kinase 1
MAPK14 mitogen-activated protein kinase 14
MAPK3 mitogen-activated protein kinase 3
MAPK8 mitogen-activated protein kinase 8
MAPT microtubule-associated protein tau
MC1R melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)
MCL1 myeloid cell leukemia 1
MIF macrophage migration inhibitory factor (glycosylation-inhibiting factor)
MIR155 microRNA 155
MMP1 matrix metallopeptidase 1
MMP13 matrix metallopeptidase 13
MMP14 matrix metallopeptidase 14 (membrane-inserted)
MMP2 matrix metallopeptidase 2
MMP8 matrix metallopeptidase 8
MMP9 matrix metallopeptidase 9
MOAP1 modulator of apoptosis 1
MS4A1 membrane-spanning 4-domains, subfamily A, member 1
MTOR mechanistic target of rapamycin (serine/threonine kinase)
MX1 MX dynamin-like GTPase 1
NAMPT nicotinamide phosphoribosyltransferase
NDRG1 N-myc downstream regulated 1
NDUFA13 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13
NELFE negative elongation factor complex member E
NEU3 sialidase 3 (membrane sialidase)
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
NGF nerve growth factor (beta polypeptide)
NLRC5 NLR family, CARD domain containing 5
NOD2 nucleotide-binding oligomerization domain containing 2
NOX5 NADPH oxidase, EF-hand calcium binding domain 5
NPPA natriuretic peptide A
NPSR1 neuropeptide S receptor 1
NR1D1 nuclear receptor subfamily 1, group D, member 1
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
NTF3 neurotrophin 3
NUCLEOLIN nucleolin multifunctional protein
NYX nyctalopin
OLR1 oxidized low density lipoprotein (lectin-like) receptor 1
ORAI1 ORAI calcium release-activated calcium modulator 1
OXT oxytocin/neurophysin I prepropeptide
P2RX4 purinergic receptor P2X, ligand gated ion channel, 4
P2RX7 purinergic receptor P2X, ligand gated ion channel, 7
P2RY1 purinergic receptor P2Y, G-protein coupled, 1
P2RY6 pyrimidinergic receptor P2Y, G-protein coupled, 6
PARK2 parkin RBR E3 ubiquitin protein ligase
PARP1 poly (ADP-ribose) polymerase 1
PAX4 paired box 4
PDLIM2 PDZ and LIM domain 2 (mystique)
PECAM1 platelet/endothelial cell adhesion molecule 1
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
PHOX2A paired-like homeobox 2a
PIDD1 p53-induced death domain protein 1
PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1
PINK1 PTEN induced putative kinase 1
PIP5K1A phosphatidylinositol-4-phosphate 5-kinase, type I, alpha
PKDCC protein kinase domain containing, cytoplasmic
PNMT phenylethanolamine N-methyltransferase
PPP1R13L protein phosphatase 1, regulatory subunit 13 like
PREX1 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1
PRKCD protein kinase C, delta
PRKCZ protein kinase C, zeta
PROS1 protein S (alpha)
PTEN phosphatase and tensin homolog
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PTK2 protein tyrosine kinase 2
PTPRC protein tyrosine phosphatase, receptor type, C
PTPRM protein tyrosine phosphatase, receptor type, M
PTX3 pentraxin 3, long
PYY peptide YY
QSOX1 quiescin Q6 sulfhydryl oxidase 1
RABIF RAB interacting factor
RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)
RAC2 ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)
RAP1GDS1 RAP1, GTP-GDP dissociation stimulator 1
RAPGEF3 Rap guanine nucleotide exchange factor (GEF) 3
RASA1 RAS p21 protein activator (GTPase activating protein) 1
RB1 retinoblastoma 1
RBBP8 retinoblastoma binding protein 8
RBP4 retinol binding protein 4, plasma
RELA v-rel avian reticuloendotheliosis viral oncogene homolog A
RETN resistin
RIPK1 receptor (TNFRSF)-interacting serine-threonine kinase 1
RPS6KA4 ribosomal protein S6 kinase, 90kDa, polypeptide 4
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5
RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1
RSAD2 radical S-adenosyl methionine domain containing 2
S100A1 S100 calcium binding protein A1
S100A8 S100 calcium binding protein A8
S100A9 S100 calcium binding protein A9
S100B S100 calcium binding protein B
SAMD4A sterile alpha motif domain containing 4A
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1
SETD7 SET domain containing (lysine methyltransferase) 7
SIGLEC5 sialic acid binding Ig-like lectin 5
SIRT1 sirtuin 1
SKAP1 src kinase associated phosphoprotein 1
SLC11A1 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 1
SLC25A31 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31
SLC4A2 solute carrier family 4 (anion exchanger), member 2
SLC6A3 solute carrier family 6 (neurotransmitter transporter), member 3
SLC6A4 solute carrier family 6 (neurotransmitter transporter), member 4
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase
SND1 staphylococcal nuclease and tudor domain containing 1
SOCS1 suppressor of cytokine signaling 1
SPN sialophorin
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
STK11 serine/threonine kinase 11
STUB1 STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase
TAC1 tachykinin, precursor 1
TACR1 tachykinin receptor 1
TBC1D4 TBC1 domain family, member 4
TERT telomerase reverse transcriptase
TFF3 trefoil factor 3 (intestinal)
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)
TFR2 transferrin receptor 2
TGFB1 transforming growth factor, beta 1
TGM2 transglutaminase 2
TIA1 TIA1 cytotoxic granule-associated RNA binding protein
TIMP1 TIMP metallopeptidase inhibitor 1
TIMP2 TIMP metallopeptidase inhibitor 2
TLR2 toll-like receptor 2
TLR3 toll-like receptor 3
TLR4 toll-like receptor 4
TMBIM4 transmembrane BAX inhibitor motif containing 4
TMED10 transmembrane emp24-like trafficking protein 10 (yeast)
TNF tumor necrosis factor
TNFAIP3 tumor necrosis factor, alpha-induced protein 3
TNFRSF11A tumor necrosis factor receptor superfamily, member 11a, NFKB activator
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b
TNFRSF1A tumor necrosis factor receptor superfamily, member 1A
TNFRSF1B tumor necrosis factor receptor superfamily, member 1B
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10
TNFSF11 tumor necrosis factor (ligand) superfamily, member 11
TNFSF13B tumor necrosis factor (ligand) superfamily, member 13b
TNFSF15 tumor necrosis factor (ligand) superfamily, member 15
TNK2 tyrosine kinase, non-receptor, 2
TP53 tumor protein p53
TP63 tumor protein p63
TP73 tumor protein p73
TPH2 tryptophan hydroxylase 2
TRAP1 TNF receptor-associated protein 1
TREM2 triggering receptor expressed on myeloid cells 2
TRPA1 transient receptor potential cation channel, subfamily A, member 1
TRPC1 transient receptor potential cation channel, subfamily C, member 1
TRPM2 transient receptor potential cation channel, subfamily M, member 2
TRPV1 transient receptor potential cation channel, subfamily V, member 1
TRPV2 transient receptor potential cation channel, subfamily V, member 2
TRPV4 transient receptor potential cation channel, subfamily V, member 4
TRRAP transformation/transcription domain-associated protein
TSLP thymic stromal lymphopoietin
TXNIP thioredoxin interacting protein
TYROBP TYRO protein tyrosine kinase binding protein
UCN urocortin
UVRAG UV radiation resistance associated
VASN vasorin
VDAC1 voltage-dependent anion channel 1
VEGFA vascular endothelial growth factor A
VEGFC vascular endothelial growth factor C
VGF VGF nerve growth factor inducible
VHL von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase
VIPR1 vasoactive intestinal peptide receptor 1
VIPR2 vasoactive intestinal peptide receptor 2
VWF von Willebrand factor
WASL Wiskott-Aldrich syndrome-like
WNK1 WNK lysine deficient protein kinase 1
XKR8 XK, Kell blood group complex subunit-related family, member 8
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta
ZYX zyxin