substantia nigra development Gene Set

Dataset GO Biological Process Annotations 2023
Category structural or functional annotations
Type biological process
Description The progression of the substantia nigra over time from its initial formation until its mature state. The substantia nigra is the layer of gray substance that separates the posterior parts of the cerebral peduncles (tegmentum mesencephali) from the anterior parts; it normally includes a posterior compact part with many pigmented cells (pars compacta) and an anterior reticular part whose cells contain little pigment (pars reticularis). (Gene Ontology, GO_0021762)
External Link http://amigo.geneontology.org/amigo/term/GO_0021762
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Genes

43 genes participating in the substantia nigra development biological process from the curated GO Biological Process Annotations 2023 dataset.

Symbol Name
ACTB actin, beta
ATP5PB ATP synthase peripheral stalk-membrane subunit b
ATP5PF ATP synthase peripheral stalk subunit F6
BASP1 brain abundant, membrane attached signal protein 1
CALM1 calmodulin 1 (phosphorylase kinase, delta)
CALM2 calmodulin 2 (phosphorylase kinase, delta)
CALM3 calmodulin 3 (phosphorylase kinase, delta)
CASP5 caspase 5, apoptosis-related cysteine peptidase
CCDC14 coiled-coil domain containing 14
CDC42 cell division cycle 42
CHKB choline kinase beta
CNP 2',3'-cyclic nucleotide 3' phosphodiesterase
COX6B1 cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)
DYNLL1 dynein, light chain, LC8-type 1
ERCC4 excision repair cross-complementation group 4
FGF9 fibroblast growth factor 9
G6PD glucose-6-phosphate dehydrogenase
GLUD1 glutamate dehydrogenase 1
GNB4 guanine nucleotide binding protein (G protein), beta polypeptide 4
H2BFS H2B histone family, member S (pseudogene)
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
INA internexin neuronal intermediate filament protein, alpha
MAOB monoamine oxidase B
MAPKAP1 mitogen-activated protein kinase associated protein 1
MBL2 mannose-binding lectin (protein C) 2, soluble
NDRG2 NDRG family member 2
NDUFS3 NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase)
PADI2 peptidyl arginine deiminase, type II
PLP1 proteolipid protein 1
POTEE POTE ankyrin domain family, member E
RHOA ras homolog family member A
S100A1 S100 calcium binding protein A1
SEC16A SEC16 homolog A (S. cerevisiae)
SIRT2 sirtuin 2
SUDS3 suppressor of defective silencing 3 homolog (S. cerevisiae)
SYNGR3 synaptogyrin 3
SYPL2 synaptophysin-like 2
TTBK1 tau tubulin kinase 1
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon
YWHAH tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta
ZNF148 zinc finger protein 148
ZNF430 zinc finger protein 430