swi/snf complex Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A SWI/SNF-type complex that contains nine or more proteins, including both conserved (core) and nonconserved components; the Swi2/Snf2 ATPase is one of the core components. (Gene Ontology, GO_0016514)
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137 proteins co-occuring with the swi/snf complex cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 2.81522
SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 2.55743
SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 2.48813
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 2.05976
ARID1A AT rich interactive domain 1A (SWI-like) 1.8821
SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 1.85045
PBRM1 polybromo 1 1.6342
ACTL6A actin-like 6A 1.52202
SMARCC2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 1.49549
ARID1B AT rich interactive domain 1B (SWI1-like) 1.36417
SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 1.32546
BANF1 barrier to autointegration factor 1 1.15416
THBS4 thrombospondin 4 1.12705
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 1.04632
DPF3 D4, zinc and double PHD fingers, family 3 1.0248
SMARCD2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 1.0248
PHF10 PHD finger protein 10 1.00448
DPF2 D4, zinc and double PHD fingers family 2 0.93596
SMARCD3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 0.876869
DNAH8 dynein, axonemal, heavy chain 8 0.841023
DPF1 D4, zinc and double PHD fingers family 1 0.832761
ADNP activity-dependent neuroprotector homeobox 0.813028
BRD7 bromodomain containing 7 0.8089
SS18L1 synovial sarcoma translocation gene on chromosome 18-like 1 0.788733
BCL7C B-cell CLL/lymphoma 7C 0.695148
TSHZ3 teashirt zinc finger homeobox 3 0.693393
ZZZ3 zinc finger, ZZ-type containing 3 0.688139
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.654311
RASA2 RAS p21 protein activator 2 0.638005
AKIRIN2 akirin 2 0.637578
SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 0.616709
PHF6 PHD finger protein 6 0.612048
HIST1H4I histone cluster 1, H4i 0.596014
HIST1H4F histone cluster 1, H4f 0.596014
HIST2H4B histone cluster 2, H4b 0.596014
HIST1H4K histone cluster 1, H4k 0.596014
HIST1H4J histone cluster 1, H4j 0.596014
HIST1H4E histone cluster 1, H4e 0.596014
HIST1H4H histone cluster 1, H4h 0.596014
HIST1H4A histone cluster 1, H4a 0.596014
HIST1H4B histone cluster 1, H4b 0.596014
HIST2H4A histone cluster 2, H4a 0.596014
HIST1H4C histone cluster 1, H4c 0.596014
HIST1H4D histone cluster 1, H4d 0.596014
HIST4H4 histone cluster 4, H4 0.595593
HIST1H4L histone cluster 1, H4l 0.595593
BRD9 bromodomain containing 9 0.587199
BCL7A B-cell CLL/lymphoma 7A 0.579669
ACTL6B actin-like 6B 0.577999
EPHA6 EPH receptor A6 0.558042
CSRP2BP CSRP2 binding protein 0.555973
ISYNA1 inositol-3-phosphate synthase 1 0.546472
TBC1D24 TBC1 domain family, member 24 0.544823
CDX4 caudal type homeobox 4 0.537416
SGK2 serum/glucocorticoid regulated kinase 2 0.525931
PIH1D1 PIH1 domain containing 1 0.493775
HIST2H3PS2 histone cluster 2, H3, pseudogene 2 0.476027
H3F3B H3 histone, family 3B (H3.3B) 0.472412
H3F3A H3 histone, family 3A 0.472412
METTL3 methyltransferase like 3 0.4608
SS18 synovial sarcoma translocation, chromosome 18 0.43538
BRCA1 breast cancer 1, early onset 0.434985
PRMT7 protein arginine methyltransferase 7 0.433407
CREBBP CREB binding protein 0.432224
PRKAA2 protein kinase, AMP-activated, alpha 2 catalytic subunit 0.427497
MED7 mediator complex subunit 7 0.42396
ZMIZ1 zinc finger, MIZ-type containing 1 0.40714
GTF2I general transcription factor IIi 0.405582
NEUROD2 neuronal differentiation 2 0.400916
MLLT1 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1 0.400916
KAT2A K(lysine) acetyltransferase 2A 0.399751
MCPH1 microcephalin 1 0.393936
TP53 tumor protein p53 0.380429
GNL3L guanine nucleotide binding protein-like 3 (nucleolar)-like 0.366623
HIST2H2AC histone cluster 2, H2ac 0.362804
HIST2H2AA4 histone cluster 2, H2aa4 0.362422
HIST2H2AA3 histone cluster 2, H2aa3 0.362422
HDAC1 histone deacetylase 1 0.357847
HIST1H2BH histone cluster 1, H2bh 0.352522
HIST3H2BB histone cluster 3, H2bb 0.352522
HIST2H2BF histone cluster 2, H2bf 0.352522
HIST1H2BD histone cluster 1, H2bd 0.352142
HIST1H2BC histone cluster 1, H2bc 0.351002
HIST1H2BF histone cluster 1, H2bf 0.351002
HIST1H2BA histone cluster 1, H2ba 0.349863
CARM1 coactivator-associated arginine methyltransferase 1 0.347208
KLF1 Kruppel-like factor 1 (erythroid) 0.341529
BAP1 BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase) 0.324201
RRAD Ras-related associated with diabetes 0.309613
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 0.304399
ARID3A AT rich interactive domain 3A (BRIGHT-like) 0.304399
TRIM9 tripartite motif containing 9 0.299197
PNPLA3 patatin-like phospholipase domain containing 3 0.298455
AADAT aminoadipate aminotransferase 0.29623
TAF8 TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa 0.295489
EHF ets homologous factor 0.284769
YY1 YY1 transcription factor 0.273367
TBP TATA box binding protein 0.272633
TADA2A transcriptional adaptor 2A 0.272267
RB1 retinoblastoma 1 0.271167
PRMT1 protein arginine methyltransferase 1 0.270434
CD44 CD44 molecule (Indian blood group) 0.250389
PRMT3 protein arginine methyltransferase 3 0.246769
TRIM27 tripartite motif containing 27 0.245685
HIPK3 homeodomain interacting protein kinase 3 0.242797
KAT2B K(lysine) acetyltransferase 2B 0.240636
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.234533
SOX11 SRY (sex determining region Y)-box 11 0.234533
CEBPB CCAAT/enhancer binding protein (C/EBP), beta 0.231672
SGK3 serum/glucocorticoid regulated kinase family, member 3 0.230601
NFIB nuclear factor I/B 0.227041
TADA3 transcriptional adaptor 3 0.225976
KDM5A lysine (K)-specific demethylase 5A 0.22385
PSMC5 proteasome (prosome, macropain) 26S subunit, ATPase, 5 0.22173
BCOR BCL6 corepressor 0.219265
HLTF helicase-like transcription factor 0.218914
AR androgen receptor 0.21681
YEATS4 YEATS domain containing 4 0.215412
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.213669
E2F6 E2F transcription factor 6 0.213322
XPC xeroderma pigmentosum, complementation group C 0.201335
BAZ2A bromodomain adjacent to zinc finger domain, 2A 0.200328
SFPQ splicing factor proline/glutamine-rich 0.196339
VMP1 vacuole membrane protein 1 0.193719
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2 0.193719
SSX1 synovial sarcoma, X breakpoint 1 0.190495
FLII flightless I homolog (Drosophila) 0.189857
MYOD1 myogenic differentiation 1 0.18796
MTSS1 metastasis suppressor 1 0.183631
MITF microphthalmia-associated transcription factor 0.176024
POU2F1 POU class 2 homeobox 1 0.172735
RELB v-rel avian reticuloendotheliosis viral oncogene homolog B 0.172468
HDAC2 histone deacetylase 2 0.172201
JARID2 jumonji, AT rich interactive domain 2 0.166884
CDX1 caudal type homeobox 1 0.162763
MYEF2 myelin expression factor 2 0.161068
CHD3 chromodomain helicase DNA binding protein 3 0.156342