synovium Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
Description The inner layer of the connective tissue that seals the joint.|The inner membrane of a joint capsule surrounding a freely movable joint. It is loosely attached to the external fibrous capsule and secretes synovial fluid. (MeSH) (Experimental Factor Ontology, EFO_0001393)
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Genes

100 genes co-occuring with the biological term synovium in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ACAN aggrecan
ACKR3 atypical chemokine receptor 3
ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif, 4
ALOX15 arachidonate 15-lipoxygenase
ANGPT1 angiopoietin 1
ANGPT2 angiopoietin 2
BCL2L1 BCL2-like 1
BIRC5 baculoviral IAP repeat containing 5
BMP2 bone morphogenetic protein 2
BMP6 bone morphogenetic protein 6
BMX BMX non-receptor tyrosine kinase
CALR calreticulin
CASP10 caspase 10, apoptosis-related cysteine peptidase
CCL20 chemokine (C-C motif) ligand 20
CCL5 chemokine (C-C motif) ligand 5
CCR5 chemokine (C-C motif) receptor 5 (gene/pseudogene)
CD163 CD163 molecule
CD209 CD209 molecule
CD68 CD68 molecule
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CEBPB CCAAT/enhancer binding protein (C/EBP), beta
CHGA chromogranin A
CLU clusterin
COL4A1 collagen, type IV, alpha 1
COL4A2 collagen, type IV, alpha 2
CXCL10 chemokine (C-X-C motif) ligand 10
CXCL12 chemokine (C-X-C motif) ligand 12
CXCL16 chemokine (C-X-C motif) ligand 16
CXCL8 chemokine (C-X-C motif) ligand 8
CXCL9 chemokine (C-X-C motif) ligand 9
EGFR epidermal growth factor receptor
EGR1 early growth response 1
ENO1 enolase 1, (alpha)
FOXP3 forkhead box P3
FSTL1 follistatin-like 1
GAB2 GRB2-associated binding protein 2
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HOXD9 homeobox D9
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
HSPD1 heat shock 60kDa protein 1 (chaperonin)
ICAM3 intercellular adhesion molecule 3
IFNG interferon, gamma
IKBKE inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon
IL10 interleukin 10
IL12A interleukin 12A
IL17A interleukin 17A
IL1B interleukin 1, beta
IL23A interleukin 23, alpha subunit p19
IL27 interleukin 27
IL33 interleukin 33
IL36A interleukin 36, alpha
IL6 interleukin 6
IRF1 interferon regulatory factor 1
ITIH2 inter-alpha-trypsin inhibitor heavy chain 2
JAM3 junctional adhesion molecule 3
LST1 leukocyte specific transcript 1
LTB lymphotoxin beta (TNF superfamily, member 3)
MIF macrophage migration inhibitory factor (glycosylation-inhibiting factor)
MIR223 microRNA 223
MMP1 matrix metallopeptidase 1
MMP13 matrix metallopeptidase 13
MMP3 matrix metallopeptidase 3
MS4A1 membrane-spanning 4-domains, subfamily A, member 1
NAMPT nicotinamide phosphoribosyltransferase
NCR3 natural cytotoxicity triggering receptor 3
PDPN podoplanin
PGF placental growth factor
PLAU plasminogen activator, urokinase
PTH1R parathyroid hormone 1 receptor
PTHLH parathyroid hormone-like hormone
PTPRC protein tyrosine phosphatase, receptor type, C
RAG1 recombination activating gene 1
RAG2 recombination activating gene 2
RARRES2 retinoic acid receptor responder (tazarotene induced) 2
RXFP1 relaxin/insulin-like family peptide receptor 1
SAA@ serum amyloid A1 cluster
SDC3 syndecan 3
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1
SHH sonic hedgehog
STAT1 signal transducer and activator of transcription 1, 91kDa
TEK TEK tyrosine kinase, endothelial
TGFB1 transforming growth factor, beta 1
TICAM1 toll-like receptor adaptor molecule 1
TIRAP toll-interleukin 1 receptor (TIR) domain containing adaptor protein
TNF tumor necrosis factor
TNFAIP3 tumor necrosis factor, alpha-induced protein 3
TNFRSF11A tumor necrosis factor receptor superfamily, member 11a, NFKB activator
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b
TNFRSF8 tumor necrosis factor receptor superfamily, member 8
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10
TNFSF11 tumor necrosis factor (ligand) superfamily, member 11
TNFSF13 tumor necrosis factor (ligand) superfamily, member 13
TNFSF13B tumor necrosis factor (ligand) superfamily, member 13b
TNFSF14 tumor necrosis factor (ligand) superfamily, member 14
TP53 tumor protein p53
TRPV1 transient receptor potential cation channel, subfamily V, member 1
VCAM1 vascular cell adhesion molecule 1
VTCN1 V-set domain containing T cell activation inhibitor 1
WISP3 WNT1 inducible signaling pathway protein 3
XIAP X-linked inhibitor of apoptosis, E3 ubiquitin protein ligase