| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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198 genes differentially expressed following the thalidomide-2258 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABCA2 | ATP-binding cassette, sub-family A (ABC1), member 2 |
| ABCG4 | ATP-binding cassette, sub-family G (WHITE), member 4 |
| ACPP | acid phosphatase, prostate |
| AMACR | alpha-methylacyl-CoA racemase |
| ARHGEF17 | Rho guanine nucleotide exchange factor (GEF) 17 |
| BLVRA | biliverdin reductase A |
| BMP10 | bone morphogenetic protein 10 |
| BST2 | bone marrow stromal cell antigen 2 |
| C11ORF16 | chromosome 11 open reading frame 16 |
| CAPN6 | calpain 6 |
| CD4 | CD4 molecule |
| CD74 | CD74 molecule, major histocompatibility complex, class II invariant chain |
| CEACAM21 | carcinoembryonic antigen-related cell adhesion molecule 21 |
| CLCN7 | chloride channel, voltage-sensitive 7 |
| CLPS | colipase, pancreatic |
| CLTA | clathrin, light chain A |
| CNTLN | centlein, centrosomal protein |
| COL3A1 | collagen, type III, alpha 1 |
| COL4A1 | collagen, type IV, alpha 1 |
| CPS1 | carbamoyl-phosphate synthase 1, mitochondrial |
| CSF1R | colony stimulating factor 1 receptor |
| CTSF | cathepsin F |
| DDX3X | DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked |
| DMBT1 | deleted in malignant brain tumors 1 |
| DRD2 | dopamine receptor D2 |
| EDA | ectodysplasin A |
| EGFR | epidermal growth factor receptor |
| EIF4G2 | eukaryotic translation initiation factor 4 gamma, 2 |
| ELF5 | E74-like factor 5 (ets domain transcription factor) |
| EXPH5 | exophilin 5 |
| FGF4 | fibroblast growth factor 4 |
| FPR1 | formyl peptide receptor 1 |
| FUT6 | fucosyltransferase 6 (alpha (1,3) fucosyltransferase) |
| GABRD | gamma-aminobutyric acid (GABA) A receptor, delta |
| GJA4 | gap junction protein, alpha 4, 37kDa |
| GKN1 | gastrokine 1 |
| GPLD1 | glycosylphosphatidylinositol specific phospholipase D1 |
| HDAC11 | histone deacetylase 11 |
| HEMK1 | HemK methyltransferase family member 1 |
| IDI2-AS1 | IDI2 antisense RNA 1 |
| IFT54 | intraflagellar transport 54 |
| ITGB3 | integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) |
| KCNMB2 | potassium channel subfamily M regulatory beta subunit 2 |
| KLHL25 | kelch-like family member 25 |
| LAIR2 | leukocyte-associated immunoglobulin-like receptor 2 |
| LILRB3 | leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3 |
| LRP1B | low density lipoprotein receptor-related protein 1B |
| LTB4R | leukotriene B4 receptor |
| MAP4 | microtubule-associated protein 4 |
| MAS1 | MAS1 proto-oncogene, G protein-coupled receptor |
| MEGF6 | multiple EGF-like-domains 6 |
| MGEA5 | meningioma expressed antigen 5 (hyaluronidase) |
| MMP13 | matrix metallopeptidase 13 |
| MYCN | v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog |
| NCF4 | neutrophil cytosolic factor 4, 40kDa |
| NDN | necdin, melanoma antigen (MAGE) family member |
| NFKBIB | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta |
| NPIPB3 | nuclear pore complex interacting protein family, member B3 |
| NPTXR | neuronal pentraxin receptor |
| NR3C1 | nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) |
| NR5A2 | nuclear receptor subfamily 5, group A, member 2 |
| OR1D2 | olfactory receptor, family 1, subfamily D, member 2 |
| PAIP2B | poly(A) binding protein interacting protein 2B |
| PI4K2A | phosphatidylinositol 4-kinase type 2 alpha |
| PPP2R2B | protein phosphatase 2, regulatory subunit B, beta |
| PQBP1 | polyglutamine binding protein 1 |
| PRKAR1B | protein kinase, cAMP-dependent, regulatory, type I, beta |
| PTCRA | pre T-cell antigen receptor alpha |
| RASA3 | RAS p21 protein activator 3 |
| RERE | arginine-glutamic acid dipeptide (RE) repeats |
| RHOH | ras homolog family member H |
| RPL35A | ribosomal protein L35a |
| RXRB | retinoid X receptor, beta |
| SERHL2 | serine hydrolase-like 2 |
| SFTPA2 | surfactant protein A2 |
| SIM2 | single-minded family bHLH transcription factor 2 |
| SLC10A1 | solute carrier family 10 (sodium/bile acid cotransporter), member 1 |
| SLC17A7 | solute carrier family 17 (vesicular glutamate transporter), member 7 |
| SLC1A2 | solute carrier family 1 (glial high affinity glutamate transporter), member 2 |
| SLC22A7 | solute carrier family 22 (organic anion transporter), member 7 |
| SMC4 | structural maintenance of chromosomes 4 |
| SPIB | Spi-B transcription factor (Spi-1/PU.1 related) |
| SRGN | serglycin |
| SULT4A1 | sulfotransferase family 4A, member 1 |
| SYCE1L | synaptonemal complex central element protein 1-like |
| SYDE1 | synapse defective 1, Rho GTPase, homolog 1 (C. elegans) |
| SYT13 | synaptotagmin XIII |
| TBX2 | T-box 2 |
| TEF | thyrotrophic embryonic factor |
| TFAP2B | transcription factor AP-2 beta (activating enhancer binding protein 2 beta) |
| TNFRSF13B | tumor necrosis factor receptor superfamily, member 13B |
| TNFRSF25 | tumor necrosis factor receptor superfamily, member 25 |
| TNS1 | tensin 1 |
| TP53I11 | tumor protein p53 inducible protein 11 |
| TRIM3 | tripartite motif containing 3 |
| TRPC1 | transient receptor potential cation channel, subfamily C, member 1 |
| WDR55 | WD repeat domain 55 |
| ZEB1 | zinc finger E-box binding homeobox 1 |
| ZZEF1 | zinc finger, ZZ-type with EF-hand domain 1 |
| Symbol | Name |
|---|---|
| ABL2 | ABL proto-oncogene 2, non-receptor tyrosine kinase |
| AHDC1 | AT hook, DNA binding motif, containing 1 |
| AKR1B1 | aldo-keto reductase family 1, member B1 (aldose reductase) |
| B4GALT2 | UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 |
| BLM | Bloom syndrome, RecQ helicase-like |
| BMP4 | bone morphogenetic protein 4 |
| C17ORF80 | chromosome 17 open reading frame 80 |
| CAMK1 | calcium/calmodulin-dependent protein kinase I |
| CCDC121 | coiled-coil domain containing 121 |
| CCDC132 | coiled-coil domain containing 132 |
| CENPO | centromere protein O |
| CLSPN | claspin |
| CNTN1 | contactin 1 |
| CPPED1 | calcineurin-like phosphoesterase domain containing 1 |
| DCAF13 | DDB1 and CUL4 associated factor 13 |
| DCP1A | decapping mRNA 1A |
| DDX31 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 |
| DNMT3A | DNA (cytosine-5-)-methyltransferase 3 alpha |
| EPPK1 | epiplakin 1 |
| ERCC4 | excision repair cross-complementation group 4 |
| F2R | coagulation factor II (thrombin) receptor |
| FAM188A | family with sequence similarity 188, member A |
| FAM189A2 | family with sequence similarity 189, member A2 |
| FAM204A | family with sequence similarity 204, member A |
| FOLR1 | folate receptor 1 (adult) |
| GMEB1 | glucocorticoid modulatory element binding protein 1 |
| GNA14 | guanine nucleotide binding protein (G protein), alpha 14 |
| GNG13 | guanine nucleotide binding protein (G protein), gamma 13 |
| GTPBP2 | GTP binding protein 2 |
| GUSBP3 | glucuronidase, beta pseudogene 3 |
| HOXC10 | homeobox C10 |
| IFNAR1 | interferon (alpha, beta and omega) receptor 1 |
| IL12RB1 | interleukin 12 receptor, beta 1 |
| IL17RA | interleukin 17 receptor A |
| IPO8 | importin 8 |
| IRF2BP1 | interferon regulatory factor 2 binding protein 1 |
| KDM8 | lysine (K)-specific demethylase 8 |
| KIAA0754 | KIAA0754 |
| KIF3A | kinesin family member 3A |
| LAMP3 | lysosomal-associated membrane protein 3 |
| MAST3 | microtubule associated serine/threonine kinase 3 |
| MEFV | Mediterranean fever |
| MRPL52 | mitochondrial ribosomal protein L52 |
| N4BP3 | NEDD4 binding protein 3 |
| NDRG4 | NDRG family member 4 |
| NIPAL2 | NIPA-like domain containing 2 |
| OLFML2A | olfactomedin-like 2A |
| OR2F1 | olfactory receptor, family 2, subfamily F, member 1 (gene/pseudogene) |
| OR7E156P | olfactory receptor, family 7, subfamily E, member 156 pseudogene |
| PAQR6 | progestin and adipoQ receptor family member VI |
| PARD6B | par-6 family cell polarity regulator beta |
| PCDHA6 | protocadherin alpha 6 |
| PGBD5 | piggyBac transposable element derived 5 |
| PLCG2 | phospholipase C, gamma 2 (phosphatidylinositol-specific) |
| PLD3 | phospholipase D family, member 3 |
| PLEKHB1 | pleckstrin homology domain containing, family B (evectins) member 1 |
| POMT2 | protein-O-mannosyltransferase 2 |
| POP5 | processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae) |
| PRDM16 | PR domain containing 16 |
| PTPRU | protein tyrosine phosphatase, receptor type, U |
| RAB11FIP5 | RAB11 family interacting protein 5 (class I) |
| RAB3A | RAB3A, member RAS oncogene family |
| RAB3IL1 | RAB3A interacting protein (rabin3)-like 1 |
| RELB | v-rel avian reticuloendotheliosis viral oncogene homolog B |
| SCAI | suppressor of cancer cell invasion |
| SH3BGR | SH3 domain binding glutamate-rich protein |
| SKI | SKI proto-oncogene |
| SLC16A6 | solute carrier family 16, member 6 |
| SLC16A7 | solute carrier family 16 (monocarboxylate transporter), member 7 |
| SLC3A1 | solute carrier family 3 (amino acid transporter heavy chain), member 1 |
| SLC47A1 | solute carrier family 47 (multidrug and toxin extrusion), member 1 |
| SMG1 | SMG1 phosphatidylinositol 3-kinase-related kinase |
| SOX12 | SRY (sex determining region Y)-box 12 |
| SPANXC | SPANX family, member C |
| SPIN1 | spindlin 1 |
| SPRY2 | sprouty homolog 2 (Drosophila) |
| STX1A | syntaxin 1A (brain) |
| SUZ12P1 | suppressor of zeste 12 homolog pseudogene 1 |
| TBC1D17 | TBC1 domain family, member 17 |
| TBKBP1 | TBK1 binding protein 1 |
| TGFBRAP1 | transforming growth factor, beta receptor associated protein 1 |
| TMEM121 | transmembrane protein 121 |
| TMEM184C | transmembrane protein 184C |
| TMPRSS4 | transmembrane protease, serine 4 |
| TRDMT1 | tRNA aspartic acid methyltransferase 1 |
| TRPC4AP | transient receptor potential cation channel, subfamily C, member 4 associated protein |
| TRPV1 | transient receptor potential cation channel, subfamily V, member 1 |
| TTLL1 | tubulin tyrosine ligase-like family member 1 |
| UNC119 | unc-119 homolog (C. elegans) |
| USB1 | U6 snRNA biogenesis 1 |
| VASH2 | vasohibin 2 |
| VEGFC | vascular endothelial growth factor C |
| ZBTB44 | zinc finger and BTB domain containing 44 |
| ZDHHC14 | zinc finger, DHHC-type containing 14 |
| ZNF134 | zinc finger protein 134 |
| ZNF668 | zinc finger protein 668 |
| ZNF76 | zinc finger protein 76 |
| ZNF768 | zinc finger protein 768 |
| ZNF862 | zinc finger protein 862 |
