third Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

297 genes co-occuring with the biological term third in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCA4 ATP-binding cassette, sub-family A (ABC1), member 4
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase
ABLIM3 actin binding LIM protein family, member 3
ADCY5 adenylate cyclase 5
ADIPOQ adiponectin, C1Q and collagen domain containing
ADM adrenomedullin
ADRB2 adrenoceptor beta 2, surface
AKAP13 A kinase (PRKA) anchor protein 13
ALK anaplastic lymphoma receptor tyrosine kinase
AMH anti-Mullerian hormone
ANO1 anoctamin 1, calcium activated chloride channel
ANO2 anoctamin 2, calcium activated chloride channel
APC adenomatous polyposis coli
APOA1 apolipoprotein A-I
AR androgen receptor
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10
ARR3 arrestin 3, retinal (X-arrestin)
ARRB2 arrestin, beta 2
ATP7A ATPase, Cu++ transporting, alpha polypeptide
ATXN1 ataxin 1
ATXN2 ataxin 2
ATXN3 ataxin 3
AVP arginine vasopressin
AVPR1A arginine vasopressin receptor 1A
AVPR2 arginine vasopressin receptor 2
B2M beta-2-microglobulin
BAX BCL2-associated X protein
BCL2 B-cell CLL/lymphoma 2
BCO2 beta-carotene oxygenase 2
BLM Bloom syndrome, RecQ helicase-like
BMP4 bone morphogenetic protein 4
BRAF B-Raf proto-oncogene, serine/threonine kinase
BSCL2 Berardinelli-Seip congenital lipodystrophy 2 (seipin)
C3 complement component 3
C9ORF72 chromosome 9 open reading frame 72
CABP1 calcium binding protein 1
CALCR calcitonin receptor
CASP6 caspase 6, apoptosis-related cysteine peptidase
CCL2 chemokine (C-C motif) ligand 2
CCR7 chemokine (C-C motif) receptor 7
CD200 CD200 molecule
CD209 CD209 molecule
CD300C CD300c molecule
CD36 CD36 molecule (thrombospondin receptor)
CD4 CD4 molecule
CDH1 cadherin 1, type 1, E-cadherin (epithelial)
CDH3 cadherin 3, type 1, P-cadherin (placental)
CDK5 cyclin-dependent kinase 5
CDK5R1 cyclin-dependent kinase 5, regulatory subunit 1 (p35)
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CDKN2A cyclin-dependent kinase inhibitor 2A
CDX2 caudal type homeobox 2
CERKL ceramide kinase-like
CHMP1B charged multivesicular body protein 1B
CHRM3 cholinergic receptor, muscarinic 3
CHRNA4 cholinergic receptor, nicotinic, alpha 4 (neuronal)
CHRNB2 cholinergic receptor, nicotinic, beta 2 (neuronal)
COL18A1 collagen, type XVIII, alpha 1
COL1A1 collagen, type I, alpha 1
COL2A1 collagen, type II, alpha 1
COL6A1 collagen, type VI, alpha 1
COL6A2 collagen, type VI, alpha 2
COL6A3 collagen, type VI, alpha 3
COMT catechol-O-methyltransferase
CRHR1 corticotropin releasing hormone receptor 1
CRP C-reactive protein, pentraxin-related
CSF2 colony stimulating factor 2 (granulocyte-macrophage)
CST3 cystatin C
CTSA cathepsin A
CX3CR1 chemokine (C-X3-C motif) receptor 1
CXCL8 chemokine (C-X-C motif) ligand 8
CXCR4 chemokine (C-X-C motif) receptor 4
CYLD cylindromatosis (turban tumor syndrome)
CYP19A1 cytochrome P450, family 19, subfamily A, polypeptide 1
CYP4V2 cytochrome P450, family 4, subfamily V, polypeptide 2
DCC DCC netrin 1 receptor
DEFA1 defensin, alpha 1
DEFA3 defensin, alpha 3, neutrophil-specific
DFNB55 deafness, autosomal recessive 55
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9
DKC1 dyskeratosis congenita 1, dyskerin
DLG4 discs, large homolog 4 (Drosophila)
DMD dystrophin
DRD1 dopamine receptor D1
DRD2 dopamine receptor D2
DSPP dentin sialophosphoprotein
DYSF dysferlin
EGFR epidermal growth factor receptor
EGR1 early growth response 1
ELAVL4 ELAV like neuron-specific RNA binding protein 4
ERG v-ets avian erythroblastosis virus E26 oncogene homolog
ETV6 ets variant 6
F11 coagulation factor XI
F2 coagulation factor II (thrombin)
F3 coagulation factor III (thromboplastin, tissue factor)
F5 coagulation factor V (proaccelerin, labile factor)
F8 coagulation factor VIII, procoagulant component
FABP3 fatty acid binding protein 3, muscle and heart
FAN1 FANCD2/FANCI-associated nuclease 1
FBN1 fibrillin 1
FGF2 fibroblast growth factor 2 (basic)
FGFR1 fibroblast growth factor receptor 1
FLT1 fms-related tyrosine kinase 1
FLT4 fms-related tyrosine kinase 4
FN1 fibronectin 1
FPR1 formyl peptide receptor 1
FPR2 formyl peptide receptor 2
FSHR follicle stimulating hormone receptor
G6PD glucose-6-phosphate dehydrogenase
GADD45B growth arrest and DNA-damage-inducible, beta
GDAP1 ganglioside induced differentiation associated protein 1
GJA1 gap junction protein, alpha 1, 43kDa
GJA3 gap junction protein, alpha 3, 46kDa
GKN1 gastrokine 1
GLI3 GLI family zinc finger 3
GLRB glycine receptor, beta
GNAI1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1
GNB3 guanine nucleotide binding protein (G protein), beta polypeptide 3
GOLGA3 golgin A3
GP1BA glycoprotein Ib (platelet), alpha polypeptide
GP9 glycoprotein IX (platelet)
GPI glucose-6-phosphate isomerase
GPR50 G protein-coupled receptor 50
GRN granulin
GSTM1 glutathione S-transferase mu 1
GZMM granzyme M (lymphocyte met-ase 1)
H19 H19, imprinted maternally expressed transcript (non-protein coding)
HABP2 hyaluronan binding protein 2
HBB hemoglobin, beta
HDAC9 histone deacetylase 9
HEYL hes-related family bHLH transcription factor with YRPW motif-like
HLA-DRB1 major histocompatibility complex, class II, DR beta 1
HNF4A hepatocyte nuclear factor 4, alpha
HNRNPK heterogeneous nuclear ribonucleoprotein K
HOXA11 homeobox A11
HOXA13 homeobox A13
HSD11B2 hydroxysteroid (11-beta) dehydrogenase 2
HTR2A 5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled
HTR3A 5-hydroxytryptamine (serotonin) receptor 3A, ionotropic
IGF2 insulin-like growth factor 2
IGFBP1 insulin-like growth factor binding protein 1
IGFBP3 insulin-like growth factor binding protein 3
IGFBP6 insulin-like growth factor binding protein 6
IKBKG inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma
IL10 interleukin 10
IL15 interleukin 15
IL17A interleukin 17A
IL18 interleukin 18
IL18R1 interleukin 18 receptor 1
IL1B interleukin 1, beta
IL1RN interleukin 1 receptor antagonist
IL2RA interleukin 2 receptor, alpha
IL4 interleukin 4
INHBA inhibin, beta A
KCNQ1 potassium channel, voltage gated KQT-like subfamily Q, member 1
KDM5B lysine (K)-specific demethylase 5B
KDR kinase insert domain receptor
KIF21A kinesin family member 21A
KIF5B kinesin family member 5B
KISS1 KiSS-1 metastasis-suppressor
KLHL3 kelch-like family member 3
KMT2A lysine (K)-specific methyltransferase 2A
KPNA2 karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
KPNB1 karyopherin (importin) beta 1
KRAS Kirsten rat sarcoma viral oncogene homolog
LCT lactase
LEP leptin
LGALS1 lectin, galactoside-binding, soluble, 1
LGALS13 lectin, galactoside-binding, soluble, 13
LRPAP1 low density lipoprotein receptor-related protein associated protein 1
LRRK2 leucine-rich repeat kinase 2
LTB4R leukotriene B4 receptor
MAF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog
MAPK1 mitogen-activated protein kinase 1
MAPK3 mitogen-activated protein kinase 3
MAPT microtubule-associated protein tau
MASP1 mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)
MC4R melanocortin 4 receptor
MCM2 minichromosome maintenance complex component 2
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase
MET MET proto-oncogene, receptor tyrosine kinase
MICA MHC class I polypeptide-related sequence A
MLC1 megalencephalic leukoencephalopathy with subcortical cysts 1
MLLT1 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
MMP12 matrix metallopeptidase 12
MMP3 matrix metallopeptidase 3
MMP8 matrix metallopeptidase 8
MSH2 mutS homolog 2
MSX1 msh homeobox 1
MTHFR methylenetetrahydrofolate reductase (NAD(P)H)
MUC16 mucin 16, cell surface associated
MYBPC3 myosin binding protein C, cardiac
MYO7A myosin VIIA
NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit
NAMPT nicotinamide phosphoribosyltransferase
NEWENTRY Record to support submission of GeneRIFs for a gene not in Gene (human; man).
NF1 neurofibromin 1
NFATC1 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
NOD2 nucleotide-binding oligomerization domain containing 2
NOS3 nitric oxide synthase 3 (endothelial cell)
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin)
NRXN1 neurexin 1
NSUN2 NOP2/Sun RNA methyltransferase family, member 2
OPA5 optic atrophy 5 (autosomal dominant)
OPRD1 opioid receptor, delta 1
OPRM1 opioid receptor, mu 1
ORAI1 ORAI calcium release-activated calcium modulator 1
OTOF otoferlin
OXTR oxytocin receptor
PALB2 partner and localizer of BRCA2
PARK7 parkinson protein 7
PARP1 poly (ADP-ribose) polymerase 1
PAX9 paired box 9
PCBP2 poly(rC) binding protein 2
PDCD1 programmed cell death 1
PDGFRA platelet-derived growth factor receptor, alpha polypeptide
PDIA2 protein disulfide isomerase family A, member 2
PEG10 paternally expressed 10
PGF placental growth factor
PINK1 PTEN induced putative kinase 1
PLAU plasminogen activator, urokinase
POU3F4 POU class 3 homeobox 4
PPARD peroxisome proliferator-activated receptor delta
PRAME preferentially expressed antigen in melanoma
PRCD progressive rod-cone degeneration
PRDX2 peroxiredoxin 2
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit
PRKRA protein kinase, interferon-inducible double stranded RNA dependent activator
PROS1 protein S (alpha)
PROZ protein Z, vitamin K-dependent plasma glycoprotein
PRPF3 pre-mRNA processing factor 3
PRTN3 proteinase 3
PSEN1 presenilin 1
PSEN2 presenilin 2
PTEN phosphatase and tensin homolog
PTGDS prostaglandin D2 synthase 21kDa (brain)
PTGER4 prostaglandin E receptor 4 (subtype EP4)
PTGIR prostaglandin I2 (prostacyclin) receptor (IP)
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PTH parathyroid hormone
PTPN3 protein tyrosine phosphatase, non-receptor type 3
PTPRS protein tyrosine phosphatase, receptor type, S
RARRES2 retinoic acid receptor responder (tazarotene induced) 2
RBP4 retinol binding protein 4, plasma
REN renin
RFXAP regulatory factor X-associated protein
RGS7 regulator of G-protein signaling 7
RMI1 RecQ mediated genome instability 1
RPS26 ribosomal protein S26
S100A16 S100 calcium binding protein A16
S100B S100 calcium binding protein B
SATB1 SATB homeobox 1
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1
SERPINB3 serpin peptidase inhibitor, clade B (ovalbumin), member 3
SH3KBP1 SH3-domain kinase binding protein 1
SHBG sex hormone-binding globulin
SHOX short stature homeobox
SLC10A1 solute carrier family 10 (sodium/bile acid cotransporter), member 1
SLC12A6 solute carrier family 12 (potassium/chloride transporter), member 6
SLC17A1 solute carrier family 17 (organic anion transporter), member 1
SLC44A2 solute carrier family 44 (choline transporter), member 2
SLC46A1 solute carrier family 46 (folate transporter), member 1
SMAD3 SMAD family member 3
SMAD4 SMAD family member 4
SPARC secreted protein, acidic, cysteine-rich (osteonectin)
SPAST spastin
SPG20 spastic paraplegia 20 (Troyer syndrome)
SPINK7 serine peptidase inhibitor, Kazal type 7 (putative)
SSTR1 somatostatin receptor 1
STIM1 stromal interaction molecule 1
SYNJ1 synaptojanin 1
TAC3 tachykinin 3
TBCB tubulin folding cofactor B
TBXA2R thromboxane A2 receptor
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)
TIMP2 TIMP metallopeptidase inhibitor 2
TJP1 tight junction protein 1
TLR3 toll-like receptor 3
TLR4 toll-like receptor 4
TMPRSS2 transmembrane protease, serine 2
TNC tenascin C
TNF tumor necrosis factor
TOP3A topoisomerase (DNA) III alpha
TOR1A torsin family 1, member A (torsin A)
TP53 tumor protein p53
TRPV6 transient receptor potential cation channel, subfamily V, member 6
TXNDC5 thioredoxin domain containing 5 (endoplasmic reticulum)
UTS2 urotensin 2
VDR vitamin D (1,25- dihydroxyvitamin D3) receptor
VEGFA vascular endothelial growth factor A
VIPR1 vasoactive intestinal peptide receptor 1
VKORC1 vitamin K epoxide reductase complex, subunit 1
VLDLR very low density lipoprotein receptor
VWF von Willebrand factor
WT1 Wilms tumor 1
ZNF674 zinc finger protein 674