thylakoid lumen Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description The volume enclosed by a thylakoid membrane. (Gene Ontology, GO_0031977)
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Genes

53 proteins co-occuring with the thylakoid lumen cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
SPX spexin hormone 1.46326
FKBP2 FK506 binding protein 2, 13kDa 1.27558
GPR152 G protein-coupled receptor 152 1.24917
CLEC3A C-type lectin domain family 3, member A 1.0109
CLEC2B C-type lectin domain family 2, member B 0.992693
CLEC10A C-type lectin domain family 10, member A 0.985854
FES FES proto-oncogene, tyrosine kinase 0.899962
LAP3 leucine aminopeptidase 3 0.897646
CLPP caseinolytic mitochondrial matrix peptidase proteolytic subunit 0.870885
CSN2 casein beta 0.731076
PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 0.69427
AIP aryl hydrocarbon receptor interacting protein 0.693832
MIPEP mitochondrial intermediate peptidase 0.65905
CPEB1 cytoplasmic polyadenylation element binding protein 1 0.644858
CNDP2 CNDP dipeptidase 2 (metallopeptidase M20 family) 0.599802
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial 0.582176
YME1L1 YME1-like 1 ATPase 0.564677
VKORC1 vitamin K epoxide reductase complex, subunit 1 0.550599
FKBP9 FK506 binding protein 9, 63 kDa 0.53413
TXN thioredoxin 0.529208
GZMK granzyme K (granzyme 3; tryptase II) 0.524704
SLC26A6 solute carrier family 26 (anion exchanger), member 6 0.522659
FKBP6 FK506 binding protein 6, 36kDa 0.520615
FKBP7 FK506 binding protein 7 0.518165
FKBP3 FK506 binding protein 3, 25kDa 0.517348
BFSP2 beaded filament structural protein 2, phakinin 0.477636
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.4672
FKBP10 FK506 binding protein 10, 65 kDa 0.445275
SCX scleraxis basic helix-loop-helix transcription factor 0.43696
PPIG peptidylprolyl isomerase G (cyclophilin G) 0.40247
FKBP5 FK506 binding protein 5 0.377354
SUMF2 sulfatase modifying factor 2 0.377354
SLC25A20 solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 0.367771
NIN ninein (GSK3B interacting protein) 0.358228
HTRA1 HtrA serine peptidase 1 0.356324
CHCHD4 coiled-coil-helix-coiled-coil-helix domain containing 4 0.353662
APEH acylaminoacyl-peptide hydrolase 0.318953
NME3 NME/NM23 nucleoside diphosphate kinase 3 0.294748
TAT tyrosine aminotransferase 0.292527
NME4 NME/NM23 nucleoside diphosphate kinase 4 0.281453
CYP26A1 cytochrome P450, family 26, subfamily A, polypeptide 1 0.278509
PPP1R14A protein phosphatase 1, regulatory (inhibitor) subunit 14A 0.277038
FKBP4 FK506 binding protein 4, 59kDa 0.232744
GFER growth factor, augmenter of liver regeneration 0.226686
PCK2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) 0.219265
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) 0.218914
SOD2 superoxide dismutase 2, mitochondrial 0.209858
COX4I1 cytochrome c oxidase subunit IV isoform 1 0.207794
SFTPB surfactant protein B 0.189539
FKBP1A FK506 binding protein 1A, 12kDa 0.18516
PPIA peptidylprolyl isomerase A (cyclophilin A) 0.183328
NME2 NME/NM23 nucleoside diphosphate kinase 2 0.171937
PRDX5 peroxiredoxin 5 0.156342