tramp complex Gene Set

Dataset	COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category	structural or functional annotations
Type	cellular component
Description	A multiprotein complex having distributive polyadenylation activity of a variety of RNA substrates including hypomodified and incorrectly folded tRNAs, pre-snRNAs, pre-snoRNAs, incorrectly spliced or processed pre-mRNAs, cryptic unstable transcripts (CUTs), pre-rRNAs and rRNA fragments released as part of rRNA processing. In S. cerevisiae, the complex consists of either Pap2 (also known as Trf4) or Trf5, Air1 or Air2, and Mtr4, and is involved in RNA 3'-end processing and in RNA surveillance and quality control. (Gene Ontology, GO_0031499)
Similar Terms
Downloads & Tools

Genes

18 proteins co-occuring with the tramp complex cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol	Name	Standardized Value
ZCCHC7	zinc finger, CCHC domain containing 7	2.16759
PAPD7	PAP associated domain containing 7	1.67386
PAPD5	PAP associated domain containing 5	1.5017
NRD1	nardilysin (N-arginine dibasic convertase)	1.42993
DIS3	DIS3 exosome endoribonuclease and 3'-5' exoribonuclease	1.39294
UTP20	UTP20, small subunit (SSU) processome component, homolog (yeast)	1.32005
SNRNP200	small nuclear ribonucleoprotein 200kDa (U5)	1.17311
XRN2	5'-3' exoribonuclease 2	1.0934
NAB2	NGFI-A binding protein 2 (EGR1 binding protein 2)	0.969848
PRPF3	pre-mRNA processing factor 3	0.937377
ARNT	aryl hydrocarbon receptor nuclear translocator	0.727047
PABPN1	poly(A) binding protein, nuclear 1	0.633732
NXF1	nuclear RNA export factor 1	0.594753
DDX19B	DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B	0.422389
AHR	aryl hydrocarbon receptor	0.277038
HIF1A	hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	0.235607
TOP1	topoisomerase (DNA) I	0.233459
RNASEH2A	ribonuclease H2, subunit A	0.182122