transformed Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

244 genes co-occuring with the biological term transformed in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase
ADCK4 aarF domain containing kinase 4
ADIPOR1 adiponectin receptor 1
ADRBK1 adrenergic, beta, receptor kinase 1
AHR aryl hydrocarbon receptor
AICDA activation-induced cytidine deaminase
AIFM3 apoptosis-inducing factor, mitochondrion-associated, 3
AKT3 v-akt murine thymoma viral oncogene homolog 3
ALK anaplastic lymphoma receptor tyrosine kinase
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B
AOX1 aldehyde oxidase 1
APC adenomatous polyposis coli
ARHGEF26 Rho guanine nucleotide exchange factor (GEF) 26
BAG4 BCL2-associated athanogene 4
BCL11B B-cell CLL/lymphoma 11B (zinc finger protein)
BCL2 B-cell CLL/lymphoma 2
BCL2L1 BCL2-like 1
BCR breakpoint cluster region
BECN1 beclin 1, autophagy related
BIRC5 baculoviral IAP repeat containing 5
BRAF B-Raf proto-oncogene, serine/threonine kinase
BRD4 bromodomain containing 4
BTG2 BTG family, member 2
C8ORF4 chromosome 8 open reading frame 4
CCDC6 coiled-coil domain containing 6
CCL8 chemokine (C-C motif) ligand 8
CCND1 cyclin D1
CD34 CD34 molecule
CD58 CD58 molecule
CDH5 cadherin 5, type 2 (vascular endothelium)
CDK2 cyclin-dependent kinase 2
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1)
CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5
CEBPB CCAAT/enhancer binding protein (C/EBP), beta
CFTR cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
CHEK1 checkpoint kinase 1
CHP1 calcineurin-like EF-hand protein 1
CHUK conserved helix-loop-helix ubiquitous kinase
COIL coilin
COL2A1 collagen, type II, alpha 1
CSE1L CSE1 chromosome segregation 1-like (yeast)
CXCL1 chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)
CXCL8 chemokine (C-X-C motif) ligand 8
CXCR3 chemokine (C-X-C motif) receptor 3
CYP1A1 cytochrome P450, family 1, subfamily A, polypeptide 1
CYP1A2 cytochrome P450, family 1, subfamily A, polypeptide 2
CYP3A4 cytochrome P450, family 3, subfamily A, polypeptide 4
DEK DEK proto-oncogene
DKK1 dickkopf WNT signaling pathway inhibitor 1
DLG1 discs, large homolog 1 (Drosophila)
DNAJA3 DnaJ (Hsp40) homolog, subfamily A, member 3
DND1 DND microRNA-mediated repression inhibitor 1
E2F6 E2F transcription factor 6
ECT2 epithelial cell transforming 2
EDN1 endothelin 1
EGFR epidermal growth factor receptor
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific )
EN2 engrailed homeobox 2
ENOX2 ecto-NOX disulfide-thiol exchanger 2
EP300 E1A binding protein p300
EPHA2 EPH receptor A2
EPO erythropoietin
EPOR erythropoietin receptor
ERAP1 endoplasmic reticulum aminopeptidase 1
ERAP2 endoplasmic reticulum aminopeptidase 2
ERBB2 erb-b2 receptor tyrosine kinase 2
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1
EWSR1 EWS RNA-binding protein 1
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit
EZR ezrin
FABP7 fatty acid binding protein 7, brain
FAS Fas cell surface death receptor
FBLN1 fibulin 1
FCRLB Fc receptor-like B
FLI1 Fli-1 proto-oncogene, ETS transcription factor
FMR1 fragile X mental retardation 1
FOXM1 forkhead box M1
FPR1 formyl peptide receptor 1
FUT4 fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)
FXN frataxin
GFPT2 glutamine-fructose-6-phosphate transaminase 2
GHRH growth hormone releasing hormone
GHRHR growth hormone releasing hormone receptor
GJA1 gap junction protein, alpha 1, 43kDa
GJB2 gap junction protein, beta 2, 26kDa
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1
GNB2 guanine nucleotide binding protein (G protein), beta polypeptide 2
GPX2 glutathione peroxidase 2
GSTP1 glutathione S-transferase pi 1
GZMB granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)
HFE hemochromatosis
HIST2H3A histone cluster 2, H3a
HIST3H3 histone cluster 3, H3
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3
HMGA1 high mobility group AT-hook 1
HOXA9 homeobox A9
HRAS Harvey rat sarcoma viral oncogene homolog
HSPA1A heat shock 70kDa protein 1A
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
IDO1 indoleamine 2,3-dioxygenase 1
IFNG interferon, gamma
IGF1 insulin-like growth factor 1 (somatomedin C)
IGF1R insulin-like growth factor 1 receptor
IGF2R insulin-like growth factor 2 receptor
IGFBP3 insulin-like growth factor binding protein 3
IKBKB inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta
IL17A interleukin 17A
IL1B interleukin 1, beta
IL2 interleukin 2
IL24 interleukin 24
IL33 interleukin 33
IL6 interleukin 6
INTS6 integrator complex subunit 6
IRF3 interferon regulatory factor 3
IRF4 interferon regulatory factor 4
IRF5 interferon regulatory factor 5
IRS1 insulin receptor substrate 1
JAK2 Janus kinase 2
JUN jun proto-oncogene
JUNB jun B proto-oncogene
KCNK9 potassium channel, two pore domain subfamily K, member 9
KIR3DL2 killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2
KLF5 Kruppel-like factor 5 (intestinal)
KRAS Kirsten rat sarcoma viral oncogene homolog
KRT8 keratin 8, type II
LGALS1 lectin, galactoside-binding, soluble, 1
LOX lysyl oxidase
LOXL2 lysyl oxidase-like 2
LSM4 LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
LTBP1 latent transforming growth factor beta binding protein 1
MAD2L1 MAD2 mitotic arrest deficient-like 1 (yeast)
MAGEB2 melanoma antigen family B2
MAML1 mastermind-like 1 (Drosophila)
MAP2K1 mitogen-activated protein kinase kinase 1
MAP3K11 mitogen-activated protein kinase kinase kinase 11
MAPK1 mitogen-activated protein kinase 1
MAPK14 mitogen-activated protein kinase 14
MAPK3 mitogen-activated protein kinase 3
MEIS1 Meis homeobox 1
MGMT O-6-methylguanine-DNA methyltransferase
MIR125B1 microRNA 125b-1
MIR148A microRNA 148a
MIR27A microRNA 27a
MIR506 microRNA 506
MMP1 matrix metallopeptidase 1
MMP2 matrix metallopeptidase 2
MMP9 matrix metallopeptidase 9
MST1R macrophage stimulating 1 receptor
MYB v-myb avian myeloblastosis viral oncogene homolog
MYC v-myc avian myelocytomatosis viral oncogene homolog
MYLK myosin light chain kinase
NCR1 natural cytotoxicity triggering receptor 1
NFE2L2 nuclear factor, erythroid 2-like 2
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
NOTCH1 notch 1
NR0B1 nuclear receptor subfamily 0, group B, member 1
NRAS neuroblastoma RAS viral (v-ras) oncogene homolog
NUP107 nucleoporin 107kDa
OSM oncostatin M
PAK3 p21 protein (Cdc42/Rac)-activated kinase 3
PARK7 parkinson protein 7
PDGFRA platelet-derived growth factor receptor, alpha polypeptide
PDIA3 protein disulfide isomerase family A, member 3
PDPN podoplanin
PHACTR3 phosphatase and actin regulator 3
PHLPP1 PH domain and leucine rich repeat protein phosphatase 1
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1
PKP2 plakophilin 2
PLAT plasminogen activator, tissue
PLAU plasminogen activator, urokinase
POSTN periostin, osteoblast specific factor
PRDM1 PR domain containing 1, with ZNF domain
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha
PRKCD protein kinase C, delta
PRKCI protein kinase C, iota
PRKCZ protein kinase C, zeta
PRMT5 protein arginine methyltransferase 5
PTEN phosphatase and tensin homolog
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PTN pleiotrophin
PTPN6 protein tyrosine phosphatase, non-receptor type 6
PTPRA protein tyrosine phosphatase, receptor type, A
PTPRJ protein tyrosine phosphatase, receptor type, J
PTPRZ1 protein tyrosine phosphatase, receptor-type, Z polypeptide 1
PTTG1 pituitary tumor-transforming 1
PVT1 Pvt1 oncogene (non-protein coding)
RAD17 RAD17 homolog (S. pombe)
RARB retinoic acid receptor, beta
RARRES3 retinoic acid receptor responder (tazarotene induced) 3
RASSF1 Ras association (RalGDS/AF-6) domain family member 1
RB1 retinoblastoma 1
RBBP7 retinoblastoma binding protein 7
RCN1 reticulocalbin 1, EF-hand calcium binding domain
RGS17 regulator of G-protein signaling 17
RHOB ras homolog family member B
RHOG ras homolog family member G
RUVBL1 RuvB-like AAA ATPase 1
RXRG retinoid X receptor, gamma
SAPCD2 suppressor APC domain containing 2
SCD stearoyl-CoA desaturase (delta-9-desaturase)
SDHD succinate dehydrogenase complex, subunit D, integral membrane protein
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9
SFRP1 secreted frizzled-related protein 1
SHFM1 split hand/foot malformation (ectrodactyly) type 1
SKP2 S-phase kinase-associated protein 2, E3 ubiquitin protein ligase
SLC22A13 solute carrier family 22 (organic anion/urate transporter), member 13
SLC29A1 solute carrier family 29 (equilibrative nucleoside transporter), member 1
SLC35B4 solute carrier family 35 (UDP-xylose/UDP-N-acetylglucosamine transporter), member B4
SLC9A1 solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1
SNW1 SNW domain containing 1
SP1 Sp1 transcription factor
SPARC secreted protein, acidic, cysteine-rich (osteonectin)
SPP1 secreted phosphoprotein 1
SPRED2 sprouty-related, EVH1 domain containing 2
SQSTM1 sequestosome 1
SRC SRC proto-oncogene, non-receptor tyrosine kinase
ST14 suppression of tumorigenicity 14 (colon carcinoma)
STAT1 signal transducer and activator of transcription 1, 91kDa
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
STAT5B signal transducer and activator of transcription 5B
SUZ12 SUZ12 polycomb repressive complex 2 subunit
TERT telomerase reverse transcriptase
TET2 tet methylcytosine dioxygenase 2
TGFB1 transforming growth factor, beta 1
TIMP1 TIMP metallopeptidase inhibitor 1
TIMP2 TIMP metallopeptidase inhibitor 2
TIPE1 TNF alpha induced protein 8 like 1
TMSB4X thymosin beta 4, X-linked
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b
TNFRSF8 tumor necrosis factor receptor superfamily, member 8
TP53 tumor protein p53
TSC1 tuberous sclerosis 1
TUBG1 tubulin, gamma 1
VEGFA vascular endothelial growth factor A
VIM vimentin
VIP vasoactive intestinal peptide
WISP1 WNT1 inducible signaling pathway protein 1
WT1 Wilms tumor 1
YAP1 Yes-associated protein 1
YY1 YY1 transcription factor