trapp complex Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A large complex that acts as a tethering factor involved in transporting vesicles from the ER through the Golgi to the plasma membrane. A TRAPP (transport protein particle) complex has a core set of proteins which are joined by specific subunits depending on the cellular component where a given TRAPP complex is active. (Gene Ontology, GO_0030008)
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50 proteins co-occuring with the trapp complex cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
TRAPPC9 trafficking protein particle complex 9 2.53013
TRAPPC10 trafficking protein particle complex 10 2.43591
TRAPPC2 trafficking protein particle complex 2 2.22843
RAB1A RAB1A, member RAS oncogene family 1.96004
TRAPPC8 trafficking protein particle complex 8 1.91395
TRAPPC6B trafficking protein particle complex 6B 1.85731
TRAPPC6A trafficking protein particle complex 6A 1.78058
TRAPPC11 trafficking protein particle complex 11 1.69032
TRAPPC2L trafficking protein particle complex 2-like 1.68971
TRAPPC4 trafficking protein particle complex 4 1.60243
TRAPPC12 trafficking protein particle complex 12 1.41362
TRAPPC3L trafficking protein particle complex 3-like 1.41362
TRAPPC3 trafficking protein particle complex 3 1.19468
SPATA4 spermatogenesis associated 4 1.03378
COPG1 coatomer protein complex, subunit gamma 1 0.781869
HYDIN HYDIN, axonemal central pair apparatus protein 0.778669
MIA3 melanoma inhibitory activity family, member 3 0.757253
EML4 echinoderm microtubule associated protein like 4 0.751357
RPS25 ribosomal protein S25 0.739163
LGALS4 lectin, galactoside-binding, soluble, 4 0.705273
VPS8 vacuolar protein sorting 8 homolog (S. cerevisiae) 0.69164
MAL2 mal, T-cell differentiation protein 2 (gene/pseudogene) 0.648291
GDI1 GDP dissociation inhibitor 1 0.648291
RABAC1 Rab acceptor 1 (prenylated) 0.620104
BET1 Bet1 golgi vesicular membrane trafficking protein 0.600644
ULK1 unc-51 like autophagy activating kinase 1 0.551012
RAB35 RAB35, member RAS oncogene family 0.535361
USO1 USO1 vesicle transport factor 0.527979
RAB8A RAB8A, member RAS oncogene family 0.515716
PITX1 paired-like homeodomain 1 0.494585
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.434985
RAP2B RAP2B, member of RAS oncogene family 0.398199
SEC24B SEC24 family member B 0.392001
SAR1A secretion associated, Ras related GTPase 1A 0.391615
ARF3 ADP-ribosylation factor 3 0.390841
RAB1B RAB1B, member RAS oncogene family 0.388137
STX5 syntaxin 5 0.367006
YKT6 YKT6 v-SNARE homolog (S. cerevisiae) 0.358609
FAM20C family with sequence similarity 20, member C 0.357467
EFNA5 ephrin-A5 0.32345
AMFR autocrine motility factor receptor, E3 ubiquitin protein ligase 0.297342
NAPA N-ethylmaleimide-sensitive factor attachment protein, alpha 0.271167
ENO1 enolase 1, (alpha) 0.238119
NR5A1 nuclear receptor subfamily 5, group A, member 1 0.212974
TGM2 transglutaminase 2 0.201335
CDKN2A cyclin-dependent kinase inhibitor 2A 0.166884
IKBKB inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta 0.161905
CNTLN centlein, centrosomal protein 0.161693
CTSC cathepsin C 0.157397
ALK anaplastic lymphoma receptor tyrosine kinase 0.156688