| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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199 genes differentially expressed following the tretinoin-1152 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABCA1 | ATP-binding cassette, sub-family A (ABC1), member 1 |
| ADD3 | adducin 3 (gamma) |
| AIM2 | absent in melanoma 2 |
| ALOX5AP | arachidonate 5-lipoxygenase-activating protein |
| ANGPTL4 | angiopoietin-like 4 |
| APBB1IP | amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein |
| ARHGEF3 | Rho guanine nucleotide exchange factor (GEF) 3 |
| ASRGL1 | asparaginase like 1 |
| B4GALT5 | UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 |
| BCL6 | B-cell CLL/lymphoma 6 |
| C1ORF106 | chromosome 1 open reading frame 106 |
| CASP9 | caspase 9, apoptosis-related cysteine peptidase |
| CCL2 | chemokine (C-C motif) ligand 2 |
| CCL20 | chemokine (C-C motif) ligand 20 |
| CCR1 | chemokine (C-C motif) receptor 1 |
| CD1D | CD1d molecule |
| CD300A | CD300a molecule |
| CD38 | CD38 molecule |
| CEBPB | CCAAT/enhancer binding protein (C/EBP), beta |
| CFP | complement factor properdin |
| COL4A2 | collagen, type IV, alpha 2 |
| CPD | carboxypeptidase D |
| CREM | cAMP responsive element modulator |
| CXCR4 | chemokine (C-X-C motif) receptor 4 |
| CYP26A1 | cytochrome P450, family 26, subfamily A, polypeptide 1 |
| DHRS3 | dehydrogenase/reductase (SDR family) member 3 |
| DNAJB12 | DnaJ (Hsp40) homolog, subfamily B, member 12 |
| EFNB2 | ephrin-B2 |
| ENDOD1 | endonuclease domain containing 1 |
| EXPH5 | exophilin 5 |
| FAM134B | family with sequence similarity 134, member B |
| FAM13A | family with sequence similarity 13, member A |
| FBP1 | fructose-1,6-bisphosphatase 1 |
| FCMR | Fc fragment of IgM receptor |
| FGR | FGR proto-oncogene, Src family tyrosine kinase |
| FLOT1 | flotillin 1 |
| G0S2 | G0/G1 switch 2 |
| GAS7 | growth arrest-specific 7 |
| GATA6 | GATA binding protein 6 |
| HBEGF | heparin-binding EGF-like growth factor |
| HOXA1 | homeobox A1 |
| HOXA5 | homeobox A5 |
| HPD | 4-hydroxyphenylpyruvate dioxygenase |
| ICAM1 | intercellular adhesion molecule 1 |
| ID1 | inhibitor of DNA binding 1, dominant negative helix-loop-helix protein |
| IFI30 | interferon, gamma-inducible protein 30 |
| ITGA6 | integrin, alpha 6 |
| ITGAM | integrin, alpha M (complement component 3 receptor 3 subunit) |
| ITGB5 | integrin, beta 5 |
| ITGB7 | integrin, beta 7 |
| KCTD12 | potassium channel tetramerization domain containing 12 |
| LAMB3 | laminin, beta 3 |
| LIF | leukemia inhibitory factor |
| LILRA5 | leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5 |
| LILRB2 | leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2 |
| LILRB3 | leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3 |
| MAFB | v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B |
| MAN1A1 | mannosidase, alpha, class 1A, member 1 |
| MLXIPL | MLX interacting protein-like |
| MYBPH | myosin binding protein H |
| NCF1C | neutrophil cytosolic factor 1C pseudogene |
| NCOA3 | nuclear receptor coactivator 3 |
| NOL3 | nucleolar protein 3 (apoptosis repressor with CARD domain) |
| NOTCH2 | notch 2 |
| NRIP1 | nuclear receptor interacting protein 1 |
| NTSR1 | neurotensin receptor 1 (high affinity) |
| OLAH | oleoyl-ACP hydrolase |
| OLR1 | oxidized low density lipoprotein (lectin-like) receptor 1 |
| PALLD | palladin, cytoskeletal associated protein |
| PDLIM5 | PDZ and LIM domain 5 |
| PECAM1 | platelet/endothelial cell adhesion molecule 1 |
| PIK3CG | phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma |
| PLEK | pleckstrin |
| PLK3 | polo-like kinase 3 |
| POLD4 | polymerase (DNA-directed), delta 4, accessory subunit |
| POR | P450 (cytochrome) oxidoreductase |
| PPP1R16B | protein phosphatase 1, regulatory subunit 16B |
| PRKCH | protein kinase C, eta |
| PSAP | prosaposin |
| PTGES | prostaglandin E synthase |
| RASGRP2 | RAS guanyl releasing protein 2 (calcium and DAG-regulated) |
| RCAN1 | regulator of calcineurin 1 |
| RHOBTB3 | Rho-related BTB domain containing 3 |
| RHOQ | ras homolog family member Q |
| S100A9 | S100 calcium binding protein A9 |
| SEL1L3 | sel-1 suppressor of lin-12-like 3 (C. elegans) |
| SERPINB1 | serpin peptidase inhibitor, clade B (ovalbumin), member 1 |
| SLA | Src-like-adaptor |
| SLC2A5 | solute carrier family 2 (facilitated glucose/fructose transporter), member 5 |
| SMAD3 | SMAD family member 3 |
| SMOX | spermine oxidase |
| SNTB1 | syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) |
| TBL2 | transducin (beta)-like 2 |
| TGM2 | transglutaminase 2 |
| THBS1 | thrombospondin 1 |
| TIMP1 | TIMP metallopeptidase inhibitor 1 |
| TLR5 | toll-like receptor 5 |
| UPB1 | ureidopropionase, beta |
| UPP1 | uridine phosphorylase 1 |
| VSIG4 | V-set and immunoglobulin domain containing 4 |
| Symbol | Name |
|---|---|
| ADAMTS1 | ADAM metallopeptidase with thrombospondin type 1 motif, 1 |
| ANKRD28 | ankyrin repeat domain 28 |
| ANKRD55 | ankyrin repeat domain 55 |
| ANO10 | anoctamin 10 |
| ANXA3 | annexin A3 |
| BATF | basic leucine zipper transcription factor, ATF-like |
| BCL11A | B-cell CLL/lymphoma 11A (zinc finger protein) |
| BYSL | bystin-like |
| C10ORF2 | chromosome 10 open reading frame 2 |
| C16ORF59 | chromosome 16 open reading frame 59 |
| C1ORF109 | chromosome 1 open reading frame 109 |
| C5ORF30 | chromosome 5 open reading frame 30 |
| CA2 | carbonic anhydrase II |
| CBR1 | carbonyl reductase 1 |
| CCDC109B | coiled-coil domain containing 109B |
| CCDC86 | coiled-coil domain containing 86 |
| CD3EAP | CD3e molecule, epsilon associated protein |
| CD69 | CD69 molecule |
| CDR2 | cerebellar degeneration-related protein 2, 62kDa |
| CHST12 | carbohydrate (chondroitin 4) sulfotransferase 12 |
| CINP | cyclin-dependent kinase 2 interacting protein |
| CLEC5A | C-type lectin domain family 5, member A |
| CTSG | cathepsin G |
| CUTC | cutC copper transporter |
| DEAF1 | DEAF1 transcription factor |
| DNAAF2 | dynein, axonemal, assembly factor 2 |
| DPH2 | DPH2 homolog (S. cerevisiae) |
| EGLN2 | egl-9 family hypoxia-inducible factor 2 |
| ENTPD6 | ectonucleoside triphosphate diphosphohydrolase 6 (putative) |
| F3 | coagulation factor III (thromboplastin, tissue factor) |
| FKBP5 | FK506 binding protein 5 |
| GNL3 | guanine nucleotide binding protein-like 3 (nucleolar) |
| HGF | hepatocyte growth factor (hepapoietin A; scatter factor) |
| HOMER1 | homer scaffolding protein 1 |
| HOPX | HOP homeobox |
| INPP5A | inositol polyphosphate-5-phosphatase, 40kDa |
| KCNA3 | potassium channel, voltage gated shaker related subfamily A, member 3 |
| KCNN2 | potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 2 |
| KCTD15 | potassium channel tetramerization domain containing 15 |
| LAMP5 | lysosomal-associated membrane protein family, member 5 |
| LTBR | lymphotoxin beta receptor (TNFR superfamily, member 3) |
| MGAM | maltase-glucoamylase |
| MRPS2 | mitochondrial ribosomal protein S2 |
| MRTO4 | mRNA turnover 4 homolog (S. cerevisiae) |
| MYC | v-myc avian myelocytomatosis viral oncogene homolog |
| NACC2 | NACC family member 2, BEN and BTB (POZ) domain containing |
| NDUFAF4 | NADH dehydrogenase (ubiquinone) complex I, assembly factor 4 |
| NIP7 | NIP7, nucleolar pre-rRNA processing protein |
| NOC4L | nucleolar complex associated 4 homolog (S. cerevisiae) |
| NR1D2 | nuclear receptor subfamily 1, group D, member 2 |
| NSMF | NMDA receptor synaptonuclear signaling and neuronal migration factor |
| NTHL1 | nth endonuclease III-like 1 (E. coli) |
| OPN3 | opsin 3 |
| PCYT2 | phosphate cytidylyltransferase 2, ethanolamine |
| PFAS | phosphoribosylformylglycinamidine synthase |
| PHLDA2 | pleckstrin homology-like domain, family A, member 2 |
| PIEZO1 | piezo-type mechanosensitive ion channel component 1 |
| PLCB4 | phospholipase C, beta 4 |
| PNMA1 | paraneoplastic Ma antigen 1 |
| PPAN | peter pan homolog (Drosophila) |
| PPDPF | pancreatic progenitor cell differentiation and proliferation factor |
| PRKX | protein kinase, X-linked |
| PRMT3 | protein arginine methyltransferase 3 |
| PTPRCAP | protein tyrosine phosphatase, receptor type, C-associated protein |
| PTX3 | pentraxin 3, long |
| PUS7 | pseudouridylate synthase 7 (putative) |
| RFTN1 | raftlin, lipid raft linker 1 |
| RPP40 | ribonuclease P/MRP 40kDa subunit |
| RRP1 | ribosomal RNA processing 1 |
| RRP9 | ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast) |
| RRS1 | RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) |
| SACS | sacsin molecular chaperone |
| SDCCAG3 | serologically defined colon cancer antigen 3 |
| SETD6 | SET domain containing 6 |
| SLC17A9 | solute carrier family 17 (vesicular nucleotide transporter), member 9 |
| SLC25A10 | solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10 |
| SLC2A9 | solute carrier family 2 (facilitated glucose transporter), member 9 |
| SLC35F2 | solute carrier family 35, member F2 |
| SLC39A14 | solute carrier family 39 (zinc transporter), member 14 |
| SLC7A5 | solute carrier family 7 (amino acid transporter light chain, L system), member 5 |
| TERT | telomerase reverse transcriptase |
| TMA16 | translation machinery associated 16 homolog (S. cerevisiae) |
| TMEM158 | transmembrane protein 158 (gene/pseudogene) |
| TMEM62 | transmembrane protein 62 |
| TOMM34 | translocase of outer mitochondrial membrane 34 |
| TRAC | T cell receptor alpha constant |
| TUBA3C | tubulin, alpha 3c |
| TWISTNB | TWIST neighbor |
| UBIAD1 | UbiA prenyltransferase domain containing 1 |
| UNG | uracil-DNA glycosylase |
| URB2 | URB2 ribosome biogenesis 2 homolog (S. cerevisiae) |
| UTP20 | UTP20, small subunit (SSU) processome component, homolog (yeast) |
| VCAN | versican |
| WDR3 | WD repeat domain 3 |
| WDR46 | WD repeat domain 46 |
| WNT10B | wingless-type MMTV integration site family, member 10B |
| WT1 | Wilms tumor 1 |
| ZDHHC11 | zinc finger, DHHC-type containing 11 |
| ZNF692 | zinc finger protein 692 |
