| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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199 genes differentially expressed following the tretinoin-1548 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABCA1 | ATP-binding cassette, sub-family A (ABC1), member 1 |
| ACSL1 | acyl-CoA synthetase long-chain family member 1 |
| ADD3 | adducin 3 (gamma) |
| ADM | adrenomedullin |
| AHR | aryl hydrocarbon receptor |
| AIM2 | absent in melanoma 2 |
| ANGPTL4 | angiopoietin-like 4 |
| ARG1 | arginase 1 |
| ARHGEF3 | Rho guanine nucleotide exchange factor (GEF) 3 |
| BAG3 | BCL2-associated athanogene 3 |
| BCL2A1 | BCL2-related protein A1 |
| BCL3 | B-cell CLL/lymphoma 3 |
| BCL6 | B-cell CLL/lymphoma 6 |
| BCLAF1 | BCL2-associated transcription factor 1 |
| C1ORF106 | chromosome 1 open reading frame 106 |
| CCL2 | chemokine (C-C motif) ligand 2 |
| CCL20 | chemokine (C-C motif) ligand 20 |
| CCR1 | chemokine (C-C motif) receptor 1 |
| CD1D | CD1d molecule |
| CD300A | CD300a molecule |
| CD38 | CD38 molecule |
| CEBPB | CCAAT/enhancer binding protein (C/EBP), beta |
| COLEC12 | collectin sub-family member 12 |
| CREG1 | cellular repressor of E1A-stimulated genes 1 |
| CTSB | cathepsin B |
| CXCR4 | chemokine (C-X-C motif) receptor 4 |
| CYP1B1 | cytochrome P450, family 1, subfamily B, polypeptide 1 |
| CYP26A1 | cytochrome P450, family 26, subfamily A, polypeptide 1 |
| DHRS3 | dehydrogenase/reductase (SDR family) member 3 |
| EFNB2 | ephrin-B2 |
| EIF1B | eukaryotic translation initiation factor 1B |
| ENAH | enabled homolog (Drosophila) |
| ENDOD1 | endonuclease domain containing 1 |
| ENPP2 | ectonucleotide pyrophosphatase/phosphodiesterase 2 |
| FAM134B | family with sequence similarity 134, member B |
| FAM13A | family with sequence similarity 13, member A |
| FGR | FGR proto-oncogene, Src family tyrosine kinase |
| G0S2 | G0/G1 switch 2 |
| GAS7 | growth arrest-specific 7 |
| GCLM | glutamate-cysteine ligase, modifier subunit |
| GLTSCR1 | glioma tumor suppressor candidate region gene 1 |
| GPRC5C | G protein-coupled receptor, class C, group 5, member C |
| HBEGF | heparin-binding EGF-like growth factor |
| HCAR3 | hydroxycarboxylic acid receptor 3 |
| HOXA5 | homeobox A5 |
| HPCAL1 | hippocalcin-like 1 |
| ICAM1 | intercellular adhesion molecule 1 |
| ID1 | inhibitor of DNA binding 1, dominant negative helix-loop-helix protein |
| ITGAM | integrin, alpha M (complement component 3 receptor 3 subunit) |
| JUN | jun proto-oncogene |
| KCTD12 | potassium channel tetramerization domain containing 12 |
| LCP2 | lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa) |
| LIF | leukemia inhibitory factor |
| LILRB2 | leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2 |
| MAFB | v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B |
| MAFF | v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F |
| MAN1A1 | mannosidase, alpha, class 1A, member 1 |
| METTL7A | methyltransferase like 7A |
| MYBPH | myosin binding protein H |
| NCF1C | neutrophil cytosolic factor 1C pseudogene |
| NINJ1 | ninjurin 1 |
| NRIP1 | nuclear receptor interacting protein 1 |
| P2RX5 | purinergic receptor P2X, ligand gated ion channel, 5 |
| PDLIM5 | PDZ and LIM domain 5 |
| PGD | phosphogluconate dehydrogenase |
| PIK3CG | phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma |
| PLCB2 | phospholipase C, beta 2 |
| PLEK | pleckstrin |
| PLIN2 | perilipin 2 |
| PLOD2 | procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 |
| POLD4 | polymerase (DNA-directed), delta 4, accessory subunit |
| POR | P450 (cytochrome) oxidoreductase |
| PPARD | peroxisome proliferator-activated receptor delta |
| PPP1R16B | protein phosphatase 1, regulatory subunit 16B |
| PSAP | prosaposin |
| PTGES | prostaglandin E synthase |
| RAB31 | RAB31, member RAS oncogene family |
| RHBDF2 | rhomboid 5 homolog 2 (Drosophila) |
| RHOBTB3 | Rho-related BTB domain containing 3 |
| SAT1 | spermidine/spermine N1-acetyltransferase 1 |
| SEL1L3 | sel-1 suppressor of lin-12-like 3 (C. elegans) |
| SERPINB1 | serpin peptidase inhibitor, clade B (ovalbumin), member 1 |
| SLA | Src-like-adaptor |
| SLC16A7 | solute carrier family 16 (monocarboxylate transporter), member 7 |
| SLC2A3 | solute carrier family 2 (facilitated glucose transporter), member 3 |
| SLC2A5 | solute carrier family 2 (facilitated glucose/fructose transporter), member 5 |
| SMAD3 | SMAD family member 3 |
| SMOX | spermine oxidase |
| SOAT1 | sterol O-acyltransferase 1 |
| SQSTM1 | sequestosome 1 |
| TBL2 | transducin (beta)-like 2 |
| TGM2 | transglutaminase 2 |
| TIMP1 | TIMP metallopeptidase inhibitor 1 |
| TMEM156 | transmembrane protein 156 |
| TNFAIP6 | tumor necrosis factor, alpha-induced protein 6 |
| TREM1 | triggering receptor expressed on myeloid cells 1 |
| TRIB1 | tribbles pseudokinase 1 |
| UPB1 | ureidopropionase, beta |
| USF2 | upstream transcription factor 2, c-fos interacting |
| ZEB2 | zinc finger E-box binding homeobox 2 |
| Symbol | Name |
|---|---|
| ABT1 | activator of basal transcription 1 |
| ADGRA3 | adhesion G protein-coupled receptor A3 |
| ADSS | adenylosuccinate synthase |
| AES | amino-terminal enhancer of split |
| ANKRD28 | ankyrin repeat domain 28 |
| ANXA6 | annexin A6 |
| ARID5B | AT rich interactive domain 5B (MRF1-like) |
| BCL11A | B-cell CLL/lymphoma 11A (zinc finger protein) |
| BMS1 | BMS1 ribosome biogenesis factor |
| BTK | Bruton agammaglobulinemia tyrosine kinase |
| BYSL | bystin-like |
| C10ORF2 | chromosome 10 open reading frame 2 |
| C12ORF29 | chromosome 12 open reading frame 29 |
| CA2 | carbonic anhydrase II |
| CBX6 | chromobox homolog 6 |
| CD3EAP | CD3e molecule, epsilon associated protein |
| CD69 | CD69 molecule |
| CEP85 | centrosomal protein 85kDa |
| CHAC1 | ChaC glutathione-specific gamma-glutamylcyclotransferase 1 |
| CLEC5A | C-type lectin domain family 5, member A |
| COA7 | cytochrome c oxidase assembly factor 7 (putative) |
| CST7 | cystatin F (leukocystatin) |
| DDX21 | DEAD (Asp-Glu-Ala-Asp) box helicase 21 |
| DKC1 | dyskeratosis congenita 1, dyskerin |
| DNAJC3 | DnaJ (Hsp40) homolog, subfamily C, member 3 |
| E2F6 | E2F transcription factor 6 |
| ECD | ecdysoneless homolog (Drosophila) |
| EIF2B3 | eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa |
| FAM173A | family with sequence similarity 173, member A |
| FARSA | phenylalanyl-tRNA synthetase, alpha subunit |
| FOXK2 | forkhead box K2 |
| GLRX5 | glutaredoxin 5 |
| GMPPB | GDP-mannose pyrophosphorylase B |
| GNL3 | guanine nucleotide binding protein-like 3 (nucleolar) |
| GPD1L | glycerol-3-phosphate dehydrogenase 1-like |
| HSPBP1 | HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 |
| IMP4 | IMP4, U3 small nucleolar ribonucleoprotein |
| KCNN2 | potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 2 |
| KCTD15 | potassium channel tetramerization domain containing 15 |
| LAMP5 | lysosomal-associated membrane protein family, member 5 |
| LARP1 | La ribonucleoprotein domain family, member 1 |
| LAS1L | LAS1-like (S. cerevisiae) |
| LMNB1 | lamin B1 |
| MAPK10 | mitogen-activated protein kinase 10 |
| METTL9 | methyltransferase like 9 |
| MPV17 | MpV17 mitochondrial inner membrane protein |
| MRPS34 | mitochondrial ribosomal protein S34 |
| MRTO4 | mRNA turnover 4 homolog (S. cerevisiae) |
| MTG1 | mitochondrial ribosome-associated GTPase 1 |
| MYC | v-myc avian myelocytomatosis viral oncogene homolog |
| NACC2 | NACC family member 2, BEN and BTB (POZ) domain containing |
| NIP7 | NIP7, nucleolar pre-rRNA processing protein |
| NME1 | NME/NM23 nucleoside diphosphate kinase 1 |
| NOL6 | nucleolar protein 6 (RNA-associated) |
| NOL8 | nucleolar protein 8 |
| NPM3 | nucleophosmin/nucleoplasmin 3 |
| NT5DC2 | 5'-nucleotidase domain containing 2 |
| NUCLEOLIN | nucleolin multifunctional protein |
| PES1 | pescadillo ribosomal biogenesis factor 1 |
| PFAS | phosphoribosylformylglycinamidine synthase |
| POLR3E | polymerase (RNA) III (DNA directed) polypeptide E (80kD) |
| PPAN | peter pan homolog (Drosophila) |
| PRDM13 | PR domain containing 13 |
| PRG2 | proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) |
| PRR3 | proline rich 3 |
| PSAT1 | phosphoserine aminotransferase 1 |
| PTGES2 | prostaglandin E synthase 2 |
| PUS1 | pseudouridylate synthase 1 |
| PUS7 | pseudouridylate synthase 7 (putative) |
| PWP2 | PWP2 periodic tryptophan protein homolog (yeast) |
| PYCR1 | pyrroline-5-carboxylate reductase 1 |
| RABEPK | Rab9 effector protein with kelch motifs |
| RPE | ribulose-5-phosphate-3-epimerase |
| RPIA | ribose 5-phosphate isomerase A |
| RPP40 | ribonuclease P/MRP 40kDa subunit |
| RRP1 | ribosomal RNA processing 1 |
| RRS1 | RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) |
| RUVBL1 | RuvB-like AAA ATPase 1 |
| SCO2 | SCO2 cytochrome c oxidase assembly protein |
| SLC39A14 | solute carrier family 39 (zinc transporter), member 14 |
| SLC39A4 | solute carrier family 39 (zinc transporter), member 4 |
| SPR | sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase) |
| STRA13 | stimulated by retinoic acid 13 |
| TARP | TCR gamma alternate reading frame protein |
| TBL3 | transducin (beta)-like 3 |
| TERT | telomerase reverse transcriptase |
| TLR2 | toll-like receptor 2 |
| TMEM177 | transmembrane protein 177 |
| TRAPPC2L | trafficking protein particle complex 2-like |
| TULP4 | tubby like protein 4 |
| UBIAD1 | UbiA prenyltransferase domain containing 1 |
| UCK2 | uridine-cytidine kinase 2 |
| UNG | uracil-DNA glycosylase |
| URB2 | URB2 ribosome biogenesis 2 homolog (S. cerevisiae) |
| USP5 | ubiquitin specific peptidase 5 (isopeptidase T) |
| UTP20 | UTP20, small subunit (SSU) processome component, homolog (yeast) |
| WDR3 | WD repeat domain 3 |
| WDR43 | WD repeat domain 43 |
| WDR77 | WD repeat domain 77 |
