| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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198 genes differentially expressed following the tretinoin-1636 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABCC4 | ATP-binding cassette, sub-family C (CFTR/MRP), member 4 |
| ADORA1 | adenosine A1 receptor |
| ALDH1A3 | aldehyde dehydrogenase 1 family, member A3 |
| ALDH3B1 | aldehyde dehydrogenase 3 family, member B1 |
| BAIAP3 | BAI1-associated protein 3 |
| BDKRB2 | bradykinin receptor B2 |
| BTG2 | BTG family, member 2 |
| C1ORF112 | chromosome 1 open reading frame 112 |
| C2ORF54 | chromosome 2 open reading frame 54 |
| CDH5 | cadherin 5, type 2 (vascular endothelium) |
| CEMIP | cell migration inducing protein, hyaluronan binding |
| CEP350 | centrosomal protein 350kDa |
| CHKB | choline kinase beta |
| CLMN | calmin (calponin-like, transmembrane) |
| CLTB | clathrin, light chain B |
| CNP | 2',3'-cyclic nucleotide 3' phosphodiesterase |
| CSF1 | colony stimulating factor 1 (macrophage) |
| CSTA | cystatin A (stefin A) |
| CYP26A1 | cytochrome P450, family 26, subfamily A, polypeptide 1 |
| CYP26B1 | cytochrome P450, family 26, subfamily B, polypeptide 1 |
| DHRS2 | dehydrogenase/reductase (SDR family) member 2 |
| DHRS3 | dehydrogenase/reductase (SDR family) member 3 |
| DLK2 | delta-like 2 homolog (Drosophila) |
| DLX2 | distal-less homeobox 2 |
| DOPEY2 | dopey family member 2 |
| DVL3 | dishevelled segment polarity protein 3 |
| DYRK2 | dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 |
| ELF3 | E74-like factor 3 (ets domain transcription factor, epithelial-specific ) |
| EPAS1 | endothelial PAS domain protein 1 |
| EPB41L1 | erythrocyte membrane protein band 4.1-like 1 |
| FAM174B | family with sequence similarity 174, member B |
| FOXO3 | forkhead box O3 |
| FZD5 | frizzled class receptor 5 |
| GADD45G | growth arrest and DNA-damage-inducible, gamma |
| GDPD5 | glycerophosphodiester phosphodiesterase domain containing 5 |
| GPRC5A | G protein-coupled receptor, class C, group 5, member A |
| HAMP | hepcidin antimicrobial peptide |
| HCAR3 | hydroxycarboxylic acid receptor 3 |
| HIST1H4D | histone cluster 1, H4d |
| HOMER3 | homer scaffolding protein 3 |
| HOXA1 | homeobox A1 |
| HOXA4 | homeobox A4 |
| HOXA5 | homeobox A5 |
| HOXB2 | homeobox B2 |
| ID1 | inhibitor of DNA binding 1, dominant negative helix-loop-helix protein |
| IGFBP3 | insulin-like growth factor binding protein 3 |
| IGFBP4 | insulin-like growth factor binding protein 4 |
| IRF1 | interferon regulatory factor 1 |
| ITPR1 | inositol 1,4,5-trisphosphate receptor, type 1 |
| JARID2 | jumonji, AT rich interactive domain 2 |
| KAZN | kazrin, periplakin interacting protein |
| KIAA0125 | KIAA0125 |
| KIF13B | kinesin family member 13B |
| KLK6 | kallikrein-related peptidase 6 |
| KRT13 | keratin 13, type I |
| MED1 | mediator complex subunit 1 |
| MICAL2 | microtubule associated monooxygenase, calponin and LIM domain containing 2 |
| NANS | N-acetylneuraminic acid synthase |
| NAV2 | neuron navigator 2 |
| NCOR2 | nuclear receptor corepressor 2 |
| NR2F6 | nuclear receptor subfamily 2, group F, member 6 |
| OPN3 | opsin 3 |
| PDCD4 | programmed cell death 4 (neoplastic transformation inhibitor) |
| PFKFB3 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 |
| PHLDA1 | pleckstrin homology-like domain, family A, member 1 |
| PLA2G10 | phospholipase A2, group X |
| PLCG2 | phospholipase C, gamma 2 (phosphatidylinositol-specific) |
| PRMT2IP | PRMT2 interacting protein |
| PRR5 | proline rich 5 (renal) |
| PSME4 | proteasome (prosome, macropain) activator subunit 4 |
| PTGES | prostaglandin E synthase |
| PTGS1 | prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) |
| RAP1GAP | RAP1 GTPase activating protein |
| RET | ret proto-oncogene |
| RFTN1 | raftlin, lipid raft linker 1 |
| RGS16 | regulator of G-protein signaling 16 |
| SCNN1A | sodium channel, non voltage gated 1 alpha subunit |
| SELL | selectin L |
| SIGLEC15 | sialic acid binding Ig-like lectin 15 |
| SIK1 | salt-inducible kinase 1 |
| SKAP2 | src kinase associated phosphoprotein 2 |
| SLC22A4 | solute carrier family 22 (organic cation/zwitterion transporter), member 4 |
| SLC22A5 | solute carrier family 22 (organic cation/carnitine transporter), member 5 |
| SMAD3 | SMAD family member 3 |
| SOX9 | SRY (sex determining region Y)-box 9 |
| SRI | sorcin |
| SRRM2 | serine/arginine repetitive matrix 2 |
| STRA6 | stimulated by retinoic acid 6 |
| STX1A | syntaxin 1A (brain) |
| TGFBI | transforming growth factor, beta-induced, 68kDa |
| TMPRSS4 | transmembrane protease, serine 4 |
| TNFAIP2 | tumor necrosis factor, alpha-induced protein 2 |
| TRAK1 | trafficking protein, kinesin binding 1 |
| TRIM2 | tripartite motif containing 2 |
| TRPV1 | transient receptor potential cation channel, subfamily V, member 1 |
| TSC22D3 | TSC22 domain family, member 3 |
| TSKU | tsukushi, small leucine rich proteoglycan |
| TTLL1 | tubulin tyrosine ligase-like family member 1 |
| XYLT1 | xylosyltransferase I |
| ZNF710 | zinc finger protein 710 |
| Symbol | Name |
|---|---|
| ANXA1 | annexin A1 |
| ARID5B | AT rich interactive domain 5B (MRF1-like) |
| ARNTL2 | aryl hydrocarbon receptor nuclear translocator-like 2 |
| B3GNT2 | UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 |
| BRIP1 | BRCA1 interacting protein C-terminal helicase 1 |
| C3ORF52 | chromosome 3 open reading frame 52 |
| C4ORF29 | chromosome 4 open reading frame 29 |
| CABYR | calcium binding tyrosine-(Y)-phosphorylation regulated |
| CCSER2 | coiled-coil serine-rich protein 2 |
| CHRNA5 | cholinergic receptor, nicotinic, alpha 5 (neuronal) |
| CITED2 | Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 |
| CLDN9 | claudin 9 |
| CLDND1 | claudin domain containing 1 |
| CLIC3 | chloride intracellular channel 3 |
| CLSPN | claspin |
| COL4A3BP | collagen, type IV, alpha 3 (Goodpasture antigen) binding protein |
| COL4A5 | collagen, type IV, alpha 5 |
| COMMD10 | COMM domain containing 10 |
| CRIP2 | cysteine-rich protein 2 |
| CWF19L1 | CWF19-like 1, cell cycle control (S. pombe) |
| DNAJC22 | DnaJ (Hsp40) homolog, subfamily C, member 22 |
| EDC3 | enhancer of mRNA decapping 3 |
| EGR3 | early growth response 3 |
| EIF2S3 | eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa |
| EIF5A2 | eukaryotic translation initiation factor 5A2 |
| EXOC5 | exocyst complex component 5 |
| F8 | coagulation factor VIII, procoagulant component |
| FMO4 | flavin containing monooxygenase 4 |
| FSTL3 | follistatin-like 3 (secreted glycoprotein) |
| FUZ | fuzzy planar cell polarity protein |
| GATC | glutamyl-tRNA(Gln) amidotransferase, subunit C |
| GHR | growth hormone receptor |
| GINS4 | GINS complex subunit 4 (Sld5 homolog) |
| GNA13 | guanine nucleotide binding protein (G protein), alpha 13 |
| GRAMD3 | GRAM domain containing 3 |
| GTF2I | general transcription factor IIi |
| GUSBP3 | glucuronidase, beta pseudogene 3 |
| HIRA | histone cell cycle regulator |
| HIST1H2BI | histone cluster 1, H2bi |
| HMGB3P1 | high mobility group box 3 pseudogene 1 |
| HS1BP3 | HCLS1 binding protein 3 |
| HSPA2 | heat shock 70kDa protein 2 |
| ID3 | inhibitor of DNA binding 3, dominant negative helix-loop-helix protein |
| IREB2 | iron-responsive element binding protein 2 |
| IRF6 | interferon regulatory factor 6 |
| JRKL | JRK-like |
| KCNJ3 | potassium channel, inwardly rectifying subfamily J, member 3 |
| KCTD20 | potassium channel tetramerization domain containing 20 |
| MAMLD1 | mastermind-like domain containing 1 |
| MAP3K14 | mitogen-activated protein kinase kinase kinase 14 |
| MED18 | mediator complex subunit 18 |
| MFSD11 | major facilitator superfamily domain containing 11 |
| MICALL2 | MICAL-like 2 |
| MOCS3 | molybdenum cofactor synthesis 3 |
| MT1E | metallothionein 1E |
| MVD | mevalonate (diphospho) decarboxylase |
| NMD3 | NMD3 ribosome export adaptor |
| NPY5R | neuropeptide Y receptor Y5 |
| NUP62CL | nucleoporin 62kDa C-terminal like |
| OSGEPL1 | O-sialoglycoprotein endopeptidase-like 1 |
| P2RX4 | purinergic receptor P2X, ligand gated ion channel, 4 |
| PAFAH1B2 | platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa) |
| PDIA3 | protein disulfide isomerase family A, member 3 |
| PERP | PERP, TP53 apoptosis effector |
| PKIA | protein kinase (cAMP-dependent, catalytic) inhibitor alpha |
| PLP2 | proteolipid protein 2 (colonic epithelium-enriched) |
| POLR2J2 | polymerase (RNA) II (DNA directed) polypeptide J2 |
| PRPF39 | pre-mRNA processing factor 39 |
| PRR15L | proline rich 15-like |
| RAB23 | RAB23, member RAS oncogene family |
| RFX7 | regulatory factor X, 7 |
| RNFT1 | ring finger protein, transmembrane 1 |
| RUFY2 | RUN and FYVE domain containing 2 |
| SCYL2 | SCY1-like 2 (S. cerevisiae) |
| SEMA3C | sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C |
| SERTAD3 | SERTA domain containing 3 |
| SLC25A40 | solute carrier family 25, member 40 |
| SLC41A3 | solute carrier family 41, member 3 |
| SLC6A14 | solute carrier family 6 (amino acid transporter), member 14 |
| SMG1 | SMG1 phosphatidylinositol 3-kinase-related kinase |
| SMPDL3A | sphingomyelin phosphodiesterase, acid-like 3A |
| SNX16 | sorting nexin 16 |
| SOWAHC | sosondowah ankyrin repeat domain family member C |
| SSR3 | signal sequence receptor, gamma (translocon-associated protein gamma) |
| SYTL2 | synaptotagmin-like 2 |
| TBL1XR1 | transducin (beta)-like 1 X-linked receptor 1 |
| TET3 | tet methylcytosine dioxygenase 3 |
| TIMM50 | translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) |
| TMEM230 | transmembrane protein 230 |
| TNFRSF12A | tumor necrosis factor receptor superfamily, member 12A |
| TRAF5 | TNF receptor-associated factor 5 |
| USP18 | ubiquitin specific peptidase 18 |
| WARS2 | tryptophanyl tRNA synthetase 2, mitochondrial |
| YIPF5 | Yip1 domain family, member 5 |
| ZBTB38 | zinc finger and BTB domain containing 38 |
| ZFYVE21 | zinc finger, FYVE domain containing 21 |
| ZNF211 | zinc finger protein 211 |
| ZNF652 | zinc finger protein 652 |
