| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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196 genes differentially expressed following the tretinoin-224 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABCA4 | ATP-binding cassette, sub-family A (ABC1), member 4 |
| ACAA2 | acetyl-CoA acyltransferase 2 |
| ACACA | acetyl-CoA carboxylase alpha |
| ADAM20 | ADAM metallopeptidase domain 20 |
| ADAP1 | ArfGAP with dual PH domains 1 |
| ADARB1 | adenosine deaminase, RNA-specific, B1 |
| ADM2 | adrenomedullin 2 |
| AKR1C3 | aldo-keto reductase family 1, member C3 |
| AKT2 | v-akt murine thymoma viral oncogene homolog 2 |
| AQP1 | aquaporin 1 (Colton blood group) |
| BDKRB2 | bradykinin receptor B2 |
| BTG2 | BTG family, member 2 |
| CCL25 | chemokine (C-C motif) ligand 25 |
| CDH5 | cadherin 5, type 2 (vascular endothelium) |
| CDK10 | cyclin-dependent kinase 10 |
| CHRNA9 | cholinergic receptor, nicotinic, alpha 9 (neuronal) |
| CLK1 | CDC-like kinase 1 |
| CNKSR1 | connector enhancer of kinase suppressor of Ras 1 |
| CYP26A1 | cytochrome P450, family 26, subfamily A, polypeptide 1 |
| CYP26B1 | cytochrome P450, family 26, subfamily B, polypeptide 1 |
| CYSLTR2 | cysteinyl leukotriene receptor 2 |
| DEGS1 | delta(4)-desaturase, sphingolipid 1 |
| DLEC1 | deleted in lung and esophageal cancer 1 |
| DNAJC4 | DnaJ (Hsp40) homolog, subfamily C, member 4 |
| DUS2 | dihydrouridine synthase 2 |
| EPAS1 | endothelial PAS domain protein 1 |
| EPN1 | epsin 1 |
| FAM153A | family with sequence similarity 153, member A |
| FAM188A | family with sequence similarity 188, member A |
| FNDC3A | fibronectin type III domain containing 3A |
| FOXC1 | forkhead box C1 |
| GABBR2 | gamma-aminobutyric acid (GABA) B receptor, 2 |
| GNA11 | guanine nucleotide binding protein (G protein), alpha 11 (Gq class) |
| GPR173 | G protein-coupled receptor 173 |
| HERC3 | HECT and RLD domain containing E3 ubiquitin protein ligase 3 |
| HMX1 | H6 family homeobox 1 |
| HOXA1 | homeobox A1 |
| HOXA4 | homeobox A4 |
| HOXA5 | homeobox A5 |
| HOXB2 | homeobox B2 |
| HOXB7 | homeobox B7 |
| HSD11B1 | hydroxysteroid (11-beta) dehydrogenase 1 |
| IFFO1 | intermediate filament family orphan 1 |
| INPP4A | inositol polyphosphate-4-phosphatase, type I, 107kDa |
| IRS2 | insulin receptor substrate 2 |
| KCNQ3 | potassium channel, voltage gated KQT-like subfamily Q, member 3 |
| KIAA0125 | KIAA0125 |
| KIAA0391 | KIAA0391 |
| LAMA3 | laminin, alpha 3 |
| LILRB3 | leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3 |
| LOC100127972 | uncharacterized LOC100127972 |
| LUZP1 | leucine zipper protein 1 |
| MCOLN3 | mucolipin 3 |
| MEF2D | myocyte enhancer factor 2D |
| METTL18 | methyltransferase like 18 |
| MINK1 | misshapen-like kinase 1 |
| MOB3B | MOB kinase activator 3B |
| MYL10 | myosin, light chain 10, regulatory |
| MYO1F | myosin IF |
| NPAS2 | neuronal PAS domain protein 2 |
| NPL | N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase) |
| NUDT4 | nudix (nucleoside diphosphate linked moiety X)-type motif 4 |
| P2RX1 | purinergic receptor P2X, ligand gated ion channel, 1 |
| PAIP2B | poly(A) binding protein interacting protein 2B |
| PAX1 | paired box 1 |
| PHLDA1 | pleckstrin homology-like domain, family A, member 1 |
| PIP5K1A | phosphatidylinositol-4-phosphate 5-kinase, type I, alpha |
| PLXNB1 | plexin B1 |
| PPP2R1B | protein phosphatase 2, regulatory subunit A, beta |
| PRB1 | proline-rich protein BstNI subfamily 1 |
| RBPMS | RNA binding protein with multiple splicing |
| RNASE3 | ribonuclease, RNase A family, 3 |
| SCNN1A | sodium channel, non voltage gated 1 alpha subunit |
| SERPINA5 | serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5 |
| SKAP2 | src kinase associated phosphoprotein 2 |
| SLC13A3 | solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 |
| SLC17A3 | solute carrier family 17 (organic anion transporter), member 3 |
| SOX9 | SRY (sex determining region Y)-box 9 |
| SPTBN1 | spectrin, beta, non-erythrocytic 1 |
| STK11 | serine/threonine kinase 11 |
| STRA6 | stimulated by retinoic acid 6 |
| TAGLN | transgelin |
| TBX3 | T-box 3 |
| TCEA2 | transcription elongation factor A (SII), 2 |
| TFPI2 | tissue factor pathway inhibitor 2 |
| TGM5 | transglutaminase 5 |
| TIMP3 | TIMP metallopeptidase inhibitor 3 |
| TMPRSS2 | transmembrane protease, serine 2 |
| TMPRSS4 | transmembrane protease, serine 4 |
| TRAK1 | trafficking protein, kinesin binding 1 |
| TRIL | TLR4 interactor with leucine-rich repeats |
| TRIM2 | tripartite motif containing 2 |
| TRIM31 | tripartite motif containing 31 |
| TRPV5 | transient receptor potential cation channel, subfamily V, member 5 |
| USP20 | ubiquitin specific peptidase 20 |
| WDR1 | WD repeat domain 1 |
| WDR18 | WD repeat domain 18 |
| WNT7A | wingless-type MMTV integration site family, member 7A |
| ZNF3 | zinc finger protein 3 |
| Symbol | Name |
|---|---|
| ABLIM3 | actin binding LIM protein family, member 3 |
| AHNAK2 | AHNAK nucleoprotein 2 |
| ALDH2 | aldehyde dehydrogenase 2 family (mitochondrial) |
| AMN | amnion associated transmembrane protein |
| ANXA1 | annexin A1 |
| ASCC2 | activating signal cointegrator 1 complex subunit 2 |
| ASIP | agouti signaling protein |
| C11ORF80 | chromosome 11 open reading frame 80 |
| C16ORF59 | chromosome 16 open reading frame 59 |
| C17ORF80 | chromosome 17 open reading frame 80 |
| C1QB | complement component 1, q subcomponent, B chain |
| CBX2 | chromobox homolog 2 |
| CD101 | CD101 molecule |
| CEP112 | centrosomal protein 112kDa |
| CHST11 | carbohydrate (chondroitin 4) sulfotransferase 11 |
| CLCF1 | cardiotrophin-like cytokine factor 1 |
| CLCN6 | chloride channel, voltage-sensitive 6 |
| CNGB3 | cyclic nucleotide gated channel beta 3 |
| COBL | cordon-bleu WH2 repeat protein |
| CRTAC1 | cartilage acidic protein 1 |
| CST8 | cystatin 8 (cystatin-related epididymal specific) |
| CYP2B7P | cytochrome P450, family 2, subfamily B, polypeptide 7, pseudogene |
| CYP46A1 | cytochrome P450, family 46, subfamily A, polypeptide 1 |
| DCAF16 | DDB1 and CUL4 associated factor 16 |
| DCSTAMP | dendrocyte expressed seven transmembrane protein |
| DDX41 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 |
| DRP2 | dystrophin related protein 2 |
| DYNC1I1 | dynein, cytoplasmic 1, intermediate chain 1 |
| EFNA3 | ephrin-A3 |
| EGR3 | early growth response 3 |
| ERO1L | ERO1-like (S. cerevisiae) |
| FAM76A | family with sequence similarity 76, member A |
| FCGR1B | Fc fragment of IgG, high affinity Ib, receptor (CD64) |
| FGF22 | fibroblast growth factor 22 |
| FGFBP1 | fibroblast growth factor binding protein 1 |
| FOXF1 | forkhead box F1 |
| FXYD1 | FXYD domain containing ion transport regulator 1 |
| FZD4 | frizzled class receptor 4 |
| GABRB2 | gamma-aminobutyric acid (GABA) A receptor, beta 2 |
| GAL3ST4 | galactose-3-O-sulfotransferase 4 |
| GIT1 | G protein-coupled receptor kinase interacting ArfGAP 1 |
| GLS2 | glutaminase 2 (liver, mitochondrial) |
| GRIP2 | glutamate receptor interacting protein 2 |
| H2AFY2 | H2A histone family, member Y2 |
| HCG4B | HLA complex group 4B (non-protein coding) |
| HOXD11 | homeobox D11 |
| HSPB3 | heat shock 27kDa protein 3 |
| JAM3 | junctional adhesion molecule 3 |
| KCNJ10 | potassium channel, inwardly rectifying subfamily J, member 10 |
| KIR3DL1 | killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 1 |
| LGALS13 | lectin, galactoside-binding, soluble, 13 |
| LHX6 | LIM homeobox 6 |
| LMTK1 | lemur tail kinase 1 |
| LOC100286895 | cell division cycle 27 homolog pseudogene |
| LYPD3 | LY6/PLAUR domain containing 3 |
| MAFB | v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B |
| MARC1 | mitochondrial amidoxime reducing component 1 |
| MARK1 | MAP/microtubule affinity-regulating kinase 1 |
| MGC2889 | uncharacterized protein MGC2889 |
| MYBL2 | v-myb avian myeloblastosis viral oncogene homolog-like 2 |
| NAB2 | NGFI-A binding protein 2 (EGR1 binding protein 2) |
| NCKAP1L | NCK-associated protein 1-like |
| NOS2 | nitric oxide synthase 2, inducible |
| OVOL1 | ovo-like zinc finger 1 |
| PARP8 | poly (ADP-ribose) polymerase family, member 8 |
| PCOLCE | procollagen C-endopeptidase enhancer |
| PLVAP | plasmalemma vesicle associated protein |
| POU5F1B | POU class 5 homeobox 1B |
| PRAMEF12 | PRAME family member 12 |
| PRSS53 | protease, serine, 53 |
| PSG2 | pregnancy specific beta-1-glycoprotein 2 |
| PTK7 | protein tyrosine kinase 7 (inactive) |
| RARRES3 | retinoic acid receptor responder (tazarotene induced) 3 |
| RHBDF1 | rhomboid 5 homolog 1 (Drosophila) |
| RHOH | ras homolog family member H |
| RPS2P45 | ribosomal protein S2 pseudogene 45 |
| SERPINB5 | serpin peptidase inhibitor, clade B (ovalbumin), member 5 |
| SIL1 | SIL1 nucleotide exchange factor |
| SIRT2 | sirtuin 2 |
| SLC22A18AS | solute carrier family 22 (organic cation transporter), member 18 antisense |
| SLC30A1 | solute carrier family 30 (zinc transporter), member 1 |
| SLC6A16 | solute carrier family 6, member 16 |
| SLC7A2 | solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 |
| SLC7A7 | solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 |
| SMO | smoothened, frizzled class receptor |
| SPINK2 | serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor) |
| TET3 | tet methylcytosine dioxygenase 3 |
| VIPR1 | vasoactive intestinal peptide receptor 1 |
| WNT3 | wingless-type MMTV integration site family, member 3 |
| ZBTB22 | zinc finger and BTB domain containing 22 |
| ZCCHC6 | zinc finger, CCHC domain containing 6 |
| ZFP36 | ZFP36 ring finger protein |
| ZKSCAN4 | zinc finger with KRAB and SCAN domains 4 |
| ZNF23 | zinc finger protein 23 |
| ZNF32 | zinc finger protein 32 |
| ZNF446 | zinc finger protein 446 |
| ZNF668 | zinc finger protein 668 |
