| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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198 genes differentially expressed following the tretinoin-2671 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABCA1 | ATP-binding cassette, sub-family A (ABC1), member 1 |
| ABCG1 | ATP-binding cassette, sub-family G (WHITE), member 1 |
| ACSL1 | acyl-CoA synthetase long-chain family member 1 |
| ADD3 | adducin 3 (gamma) |
| ADM | adrenomedullin |
| AIM2 | absent in melanoma 2 |
| ANGPTL4 | angiopoietin-like 4 |
| ARHGAP12 | Rho GTPase activating protein 12 |
| ARHGEF3 | Rho guanine nucleotide exchange factor (GEF) 3 |
| ASRGL1 | asparaginase like 1 |
| ATXN2L | ataxin 2-like |
| BCL6 | B-cell CLL/lymphoma 6 |
| BCL7B | B-cell CLL/lymphoma 7B |
| C1ORF106 | chromosome 1 open reading frame 106 |
| CCL2 | chemokine (C-C motif) ligand 2 |
| CCNA1 | cyclin A1 |
| CCR1 | chemokine (C-C motif) receptor 1 |
| CD1D | CD1d molecule |
| CD300A | CD300a molecule |
| CD300C | CD300c molecule |
| CD38 | CD38 molecule |
| CDKN2D | cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) |
| CHI3L1 | chitinase 3-like 1 (cartilage glycoprotein-39) |
| CLIC3 | chloride intracellular channel 3 |
| CLMN | calmin (calponin-like, transmembrane) |
| COL4A2 | collagen, type IV, alpha 2 |
| COLQ | collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase |
| CXCR5 | chemokine (C-X-C motif) receptor 5 |
| CYP26A1 | cytochrome P450, family 26, subfamily A, polypeptide 1 |
| DHRS3 | dehydrogenase/reductase (SDR family) member 3 |
| DNAJB12 | DnaJ (Hsp40) homolog, subfamily B, member 12 |
| EFNB2 | ephrin-B2 |
| ENDOD1 | endonuclease domain containing 1 |
| ENPP2 | ectonucleotide pyrophosphatase/phosphodiesterase 2 |
| EXPH5 | exophilin 5 |
| FAM134B | family with sequence similarity 134, member B |
| FAM13A | family with sequence similarity 13, member A |
| FAM49B | family with sequence similarity 49, member B |
| FBP1 | fructose-1,6-bisphosphatase 1 |
| FCMR | Fc fragment of IgM receptor |
| FGF9 | fibroblast growth factor 9 |
| FGR | FGR proto-oncogene, Src family tyrosine kinase |
| FLOT1 | flotillin 1 |
| G0S2 | G0/G1 switch 2 |
| GPRC5C | G protein-coupled receptor, class C, group 5, member C |
| HAB1 | B1 for mucin |
| HBEGF | heparin-binding EGF-like growth factor |
| HOXA1 | homeobox A1 |
| HOXA4 | homeobox A4 |
| HOXA5 | homeobox A5 |
| HPD | 4-hydroxyphenylpyruvate dioxygenase |
| ICAM1 | intercellular adhesion molecule 1 |
| ID1 | inhibitor of DNA binding 1, dominant negative helix-loop-helix protein |
| IER3 | immediate early response 3 |
| IFI6 | interferon, alpha-inducible protein 6 |
| ITGAM | integrin, alpha M (complement component 3 receptor 3 subunit) |
| KIAA0513 | KIAA0513 |
| LAMB3 | laminin, beta 3 |
| LIF | leukemia inhibitory factor |
| LILRA5 | leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5 |
| LILRB2 | leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2 |
| MAN1A1 | mannosidase, alpha, class 1A, member 1 |
| METTL7A | methyltransferase like 7A |
| MLXIPL | MLX interacting protein-like |
| MX2 | MX dynamin-like GTPase 2 |
| MYBPH | myosin binding protein H |
| NCF1C | neutrophil cytosolic factor 1C pseudogene |
| NINJ1 | ninjurin 1 |
| NRIP1 | nuclear receptor interacting protein 1 |
| NUDT18 | nudix (nucleoside diphosphate linked moiety X)-type motif 18 |
| OLAH | oleoyl-ACP hydrolase |
| PALLD | palladin, cytoskeletal associated protein |
| PDLIM5 | PDZ and LIM domain 5 |
| PLEK | pleckstrin |
| PLIN2 | perilipin 2 |
| PMS2P3 | postmeiotic segregation increased 2 pseudogene 3 |
| PPFIA4 | protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 |
| PTGES | prostaglandin E synthase |
| RAB31 | RAB31, member RAS oncogene family |
| RCAN1 | regulator of calcineurin 1 |
| RRBP1 | ribosome binding protein 1 |
| SAT1 | spermidine/spermine N1-acetyltransferase 1 |
| SEL1L3 | sel-1 suppressor of lin-12-like 3 (C. elegans) |
| SEMA6B | sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B |
| SERPINB1 | serpin peptidase inhibitor, clade B (ovalbumin), member 1 |
| SLA | Src-like-adaptor |
| SLC23A2 | solute carrier family 23 (ascorbic acid transporter), member 2 |
| SLC2A5 | solute carrier family 2 (facilitated glucose/fructose transporter), member 5 |
| SMAD3 | SMAD family member 3 |
| SMOX | spermine oxidase |
| SOAT1 | sterol O-acyltransferase 1 |
| SRR | serine racemase |
| STAG3L4 | stromal antigen 3-like 4 (pseudogene) |
| STX11 | syntaxin 11 |
| TBL2 | transducin (beta)-like 2 |
| TGM2 | transglutaminase 2 |
| TIMP1 | TIMP metallopeptidase inhibitor 1 |
| TNFAIP6 | tumor necrosis factor, alpha-induced protein 6 |
| TREM1 | triggering receptor expressed on myeloid cells 1 |
| UPB1 | ureidopropionase, beta |
| Symbol | Name |
|---|---|
| ADGRA3 | adhesion G protein-coupled receptor A3 |
| ADRB2 | adrenoceptor beta 2, surface |
| ANKRD28 | ankyrin repeat domain 28 |
| ANXA3 | annexin A3 |
| ARID5B | AT rich interactive domain 5B (MRF1-like) |
| ASPSCR1 | alveolar soft part sarcoma chromosome region, candidate 1 |
| BAMBI | BMP and activin membrane-bound inhibitor |
| BATF3 | basic leucine zipper transcription factor, ATF-like 3 |
| BCL11A | B-cell CLL/lymphoma 11A (zinc finger protein) |
| C22ORF29 | chromosome 22 open reading frame 29 |
| C5 | complement component 5 |
| C5AR1 | complement component 5a receptor 1 |
| C8A | complement component 8, alpha polypeptide |
| CA11 | carbonic anhydrase XI |
| CA2 | carbonic anhydrase II |
| CCDC109B | coiled-coil domain containing 109B |
| CCL27 | chemokine (C-C motif) ligand 27 |
| CD3EAP | CD3e molecule, epsilon associated protein |
| CD9 | CD9 molecule |
| CDK3 | cyclin-dependent kinase 3 |
| CDR2 | cerebellar degeneration-related protein 2, 62kDa |
| CHAC1 | ChaC glutathione-specific gamma-glutamylcyclotransferase 1 |
| CLEC2D | C-type lectin domain family 2, member D |
| CLEC5A | C-type lectin domain family 5, member A |
| CLEC7A | C-type lectin domain family 7, member A |
| CLN6 | ceroid-lipofuscinosis, neuronal 6, late infantile, variant |
| DDN | dendrin |
| DENND5B | DENN/MADD domain containing 5B |
| DEPTOR | DEP domain containing MTOR-interacting protein |
| DOCK4 | dedicator of cytokinesis 4 |
| DOK3 | docking protein 3 |
| DSPP | dentin sialophosphoprotein |
| EEF2KMT | eukaryotic elongation factor 2 lysine methyltransferase |
| EYA3 | EYA transcriptional coactivator and phosphatase 3 |
| FGF23 | fibroblast growth factor 23 |
| FJX1 | four jointed box 1 (Drosophila) |
| GCNT1 | glucosaminyl (N-acetyl) transferase 1, core 2 |
| GIT1 | G protein-coupled receptor kinase interacting ArfGAP 1 |
| GNG7 | guanine nucleotide binding protein (G protein), gamma 7 |
| HAMP | hepcidin antimicrobial peptide |
| HIST1H2AI | histone cluster 1, H2ai |
| HIST1H2AJ | histone cluster 1, H2aj |
| HMGA2 | high mobility group AT-hook 2 |
| HNRNPA3P1 | heterogeneous nuclear ribonucleoprotein A3 pseudogene 1 |
| HOPX | HOP homeobox |
| HPR | haptoglobin-related protein |
| HYAL2 | hyaluronoglucosaminidase 2 |
| IL12RB1 | interleukin 12 receptor, beta 1 |
| IL1R2 | interleukin 1 receptor, type II |
| IMPDH1 | IMP (inosine 5'-monophosphate) dehydrogenase 1 |
| IRX5 | iroquois homeobox 5 |
| ISOC1 | isochorismatase domain containing 1 |
| KCNA3 | potassium channel, voltage gated shaker related subfamily A, member 3 |
| KIAA1456 | KIAA1456 |
| KLF11 | Kruppel-like factor 11 |
| L2HGDH | L-2-hydroxyglutarate dehydrogenase |
| LAX1 | lymphocyte transmembrane adaptor 1 |
| LIME1 | Lck interacting transmembrane adaptor 1 |
| LIN7B | lin-7 homolog B (C. elegans) |
| LRRC20 | leucine rich repeat containing 20 |
| LY6D | lymphocyte antigen 6 complex, locus D |
| MBL1P | mannose-binding lectin (protein A) 1, pseudogene |
| MMP9 | matrix metallopeptidase 9 |
| MRPS18C | mitochondrial ribosomal protein S18C |
| MTSS1L | metastasis suppressor 1-like |
| NAG18 | NAG18 mRNA |
| OCLN | occludin |
| PIAS3 | protein inhibitor of activated STAT, 3 |
| PKD2L2 | polycystic kidney disease 2-like 2 |
| PLA2G1B | phospholipase A2, group IB (pancreas) |
| PLCB4 | phospholipase C, beta 4 |
| PLEC | plectin |
| POLL | polymerase (DNA directed), lambda |
| PTX3 | pentraxin 3, long |
| RAC3 | ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) |
| RAD54L2 | RAD54-like 2 (S. cerevisiae) |
| SEMA3G | sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G |
| SIDT1 | SID1 transmembrane family, member 1 |
| SLC10A3 | solute carrier family 10, member 3 |
| SLC7A5 | solute carrier family 7 (amino acid transporter light chain, L system), member 5 |
| SMR3A | submaxillary gland androgen regulated protein 3A |
| SULT1B1 | sulfotransferase family, cytosolic, 1B, member 1 |
| SYTL2 | synaptotagmin-like 2 |
| TEP1 | telomerase-associated protein 1 |
| THEM6 | thioesterase superfamily member 6 |
| TIGD6 | tigger transposable element derived 6 |
| TM6SF1 | transmembrane 6 superfamily member 1 |
| TMEM120B | transmembrane protein 120B |
| TMEM134 | transmembrane protein 134 |
| TMEM212 | transmembrane protein 212 |
| TNFRSF12A | tumor necrosis factor receptor superfamily, member 12A |
| TNFRSF21 | tumor necrosis factor receptor superfamily, member 21 |
| TRMU | tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase |
| USP32 | ubiquitin specific peptidase 32 |
| VNN2 | vanin 2 |
| WDR33 | WD repeat domain 33 |
| XAF1 | XIAP associated factor 1 |
| ZNF696 | zinc finger protein 696 |
