| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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200 genes differentially expressed following the tretinoin-390 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ACOT9 | acyl-CoA thioesterase 9 |
| ADD3 | adducin 3 (gamma) |
| AMFR | autocrine motility factor receptor, E3 ubiquitin protein ligase |
| ARHGAP12 | Rho GTPase activating protein 12 |
| ARRB1 | arrestin, beta 1 |
| ARRB2 | arrestin, beta 2 |
| ATOX1 | antioxidant 1 copper chaperone |
| BCL2A1 | BCL2-related protein A1 |
| BIK | BCL2-interacting killer (apoptosis-inducing) |
| BTG2 | BTG family, member 2 |
| C11ORF49 | chromosome 11 open reading frame 49 |
| CCL2 | chemokine (C-C motif) ligand 2 |
| CCR1 | chemokine (C-C motif) receptor 1 |
| CCR3 | chemokine (C-C motif) receptor 3 |
| CD1D | CD1d molecule |
| CD38 | CD38 molecule |
| CEBPB | CCAAT/enhancer binding protein (C/EBP), beta |
| CFP | complement factor properdin |
| CIITA | class II, major histocompatibility complex, transactivator |
| CKB | creatine kinase, brain |
| COQ3 | coenzyme Q3 methyltransferase |
| CPT2 | carnitine palmitoyltransferase 2 |
| CSF1R | colony stimulating factor 1 receptor |
| DHRS3 | dehydrogenase/reductase (SDR family) member 3 |
| DNAJB12 | DnaJ (Hsp40) homolog, subfamily B, member 12 |
| DPF2 | D4, zinc and double PHD fingers family 2 |
| EHBP1L1 | EH domain binding protein 1-like 1 |
| ELF4 | E74-like factor 4 (ets domain transcription factor) |
| ETV5 | ets variant 5 |
| FBP1 | fructose-1,6-bisphosphatase 1 |
| FGR | FGR proto-oncogene, Src family tyrosine kinase |
| FKBP8 | FK506 binding protein 8, 38kDa |
| FLOT1 | flotillin 1 |
| GIPC1 | GIPC PDZ domain containing family, member 1 |
| GM2A | GM2 ganglioside activator |
| GOSR2 | golgi SNAP receptor complex member 2 |
| GPKOW | G patch domain and KOW motifs |
| GPR15 | G protein-coupled receptor 15 |
| HBEGF | heparin-binding EGF-like growth factor |
| HIF1AN | hypoxia inducible factor 1, alpha subunit inhibitor |
| ICAM1 | intercellular adhesion molecule 1 |
| ID1 | inhibitor of DNA binding 1, dominant negative helix-loop-helix protein |
| INPP5K | inositol polyphosphate-5-phosphatase K |
| ITGA6 | integrin, alpha 6 |
| KIF21B | kinesin family member 21B |
| LILRA5 | leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5 |
| LILRB2 | leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2 |
| LINC00339 | long intergenic non-protein coding RNA 339 |
| LPPR2 | lipid phosphate phosphatase-related protein type 2 |
| LRMP | lymphoid-restricted membrane protein |
| LTB4R | leukotriene B4 receptor |
| LUZP1 | leucine zipper protein 1 |
| MAPT | microtubule-associated protein tau |
| MARCKSL1 | MARCKS-like 1 |
| MDC1 | mediator of DNA-damage checkpoint 1 |
| MOB3B | MOB kinase activator 3B |
| MSH3 | mutS homolog 3 |
| MYBPH | myosin binding protein H |
| NCF1C | neutrophil cytosolic factor 1C pseudogene |
| NCOA3 | nuclear receptor coactivator 3 |
| NINJ2 | ninjurin 2 |
| NNAT | neuronatin |
| NOTCH2 | notch 2 |
| NOX1 | NADPH oxidase 1 |
| NUMA1 | nuclear mitotic apparatus protein 1 |
| PIGV | phosphatidylinositol glycan anchor biosynthesis, class V |
| PIK3CG | phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma |
| PKN1 | protein kinase N1 |
| PLEKHO1 | pleckstrin homology domain containing, family O member 1 |
| PMAIP1 | phorbol-12-myristate-13-acetate-induced protein 1 |
| POR | P450 (cytochrome) oxidoreductase |
| PTCD1 | pentatricopeptide repeat domain 1 |
| PTN | pleiotrophin |
| PTPRA | protein tyrosine phosphatase, receptor type, A |
| RAB3D | RAB3D, member RAS oncogene family |
| RBM19 | RNA binding motif protein 19 |
| RHOBTB3 | Rho-related BTB domain containing 3 |
| RHOQ | ras homolog family member Q |
| SCD | stearoyl-CoA desaturase (delta-9-desaturase) |
| SEL1L3 | sel-1 suppressor of lin-12-like 3 (C. elegans) |
| SEMA6B | sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B |
| SIPA1 | signal-induced proliferation-associated 1 |
| SLA | Src-like-adaptor |
| SLC11A2 | solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 |
| SLC12A4 | solute carrier family 12 (potassium/chloride transporter), member 4 |
| SLC23A2 | solute carrier family 23 (ascorbic acid transporter), member 2 |
| SLC2A5 | solute carrier family 2 (facilitated glucose/fructose transporter), member 5 |
| SMAD3 | SMAD family member 3 |
| SMOX | spermine oxidase |
| SNAP25 | synaptosomal-associated protein, 25kDa |
| SYDE1 | synapse defective 1, Rho GTPase, homolog 1 (C. elegans) |
| TBL2 | transducin (beta)-like 2 |
| TGM2 | transglutaminase 2 |
| TGM5 | transglutaminase 5 |
| TNFAIP2 | tumor necrosis factor, alpha-induced protein 2 |
| TRABD | TraB domain containing |
| TTLL4 | tubulin tyrosine ligase-like family member 4 |
| ZER1 | zyg-11 related, cell cycle regulator |
| ZMAT3 | zinc finger, matrin-type 3 |
| ZNF592 | zinc finger protein 592 |
| Symbol | Name |
|---|---|
| ACTC1 | actin, alpha, cardiac muscle 1 |
| ACTG2 | actin, gamma 2, smooth muscle, enteric |
| AGO4 | argonaute RISC catalytic component 4 |
| ALOX15B | arachidonate 15-lipoxygenase, type B |
| ANAPC2 | anaphase promoting complex subunit 2 |
| ASAP1-IT1 | ASAP1 intronic transcript 1 |
| BAHCC1 | BAH domain and coiled-coil containing 1 |
| BNC2 | basonuclin 2 |
| C12ORF29 | chromosome 12 open reading frame 29 |
| C1ORF95 | chromosome 1 open reading frame 95 |
| CCL21 | chemokine (C-C motif) ligand 21 |
| CCNA1 | cyclin A1 |
| CD302 | CD302 molecule |
| CD68 | CD68 molecule |
| CLEC2B | C-type lectin domain family 2, member B |
| CPA3 | carboxypeptidase A3 (mast cell) |
| CUBN | cubilin (intrinsic factor-cobalamin receptor) |
| DDR2 | discoidin domain receptor tyrosine kinase 2 |
| EIF2B3 | eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa |
| EMILIN2 | elastin microfibril interfacer 2 |
| EPHX1 | epoxide hydrolase 1, microsomal (xenobiotic) |
| ESF1 | ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) |
| FHL3 | four and a half LIM domains 3 |
| FSTL4 | follistatin-like 4 |
| GABRA4 | gamma-aminobutyric acid (GABA) A receptor, alpha 4 |
| GNG4 | guanine nucleotide binding protein (G protein), gamma 4 |
| GPN3 | GPN-loop GTPase 3 |
| GPR21 | G protein-coupled receptor 21 |
| GRB7 | growth factor receptor-bound protein 7 |
| GSTA4 | glutathione S-transferase alpha 4 |
| HGSNAT | heparan-alpha-glucosaminide N-acetyltransferase |
| HPGDS | hematopoietic prostaglandin D synthase |
| IFIT3 | interferon-induced protein with tetratricopeptide repeats 3 |
| IFNG | interferon, gamma |
| IL19 | interleukin 19 |
| INHA | inhibin, alpha |
| IQCG | IQ motif containing G |
| JADE3 | jade family PHD finger 3 |
| KATNBL1 | katanin p80 subunit B-like 1 |
| KBTBD4 | kelch repeat and BTB (POZ) domain containing 4 |
| KCNN2 | potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 2 |
| KIAA0509 | uncharacterized LOC57242 |
| KIR2DL3 | killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3 |
| KIR3DS1 | killer cell immunoglobulin-like receptor, three domains, short cytoplasmic tail, 1 |
| KLF15 | Kruppel-like factor 15 |
| LPAR6 | lysophosphatidic acid receptor 6 |
| LYPLA2P1 | lysophospholipase II pseudogene 1 |
| MAL | mal, T-cell differentiation protein |
| METTL8 | methyltransferase like 8 |
| MGC12488 | |
| MKL2 | MKL/myocardin-like 2 |
| MRTO4 | mRNA turnover 4 homolog (S. cerevisiae) |
| MYBBP1A | MYB binding protein (P160) 1a |
| MYC | v-myc avian myelocytomatosis viral oncogene homolog |
| NAT8 | N-acetyltransferase 8 (GCN5-related, putative) |
| NCS1 | neuronal calcium sensor 1 |
| NELL2 | NEL-like 2 (chicken) |
| NME3 | NME/NM23 nucleoside diphosphate kinase 3 |
| NR1D2 | nuclear receptor subfamily 1, group D, member 2 |
| NRSN2 | neurensin 2 |
| NTHL1 | nth endonuclease III-like 1 (E. coli) |
| NXF3 | nuclear RNA export factor 3 |
| OR2B6 | olfactory receptor, family 2, subfamily B, member 6 |
| PIEZO2 | piezo-type mechanosensitive ion channel component 2 |
| PIGR | polymeric immunoglobulin receptor |
| PLA2G7 | phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) |
| PPRC1 | peroxisome proliferator-activated receptor gamma, coactivator-related 1 |
| PRRX1 | paired related homeobox 1 |
| PUS7 | pseudouridylate synthase 7 (putative) |
| PUS7L | pseudouridylate synthase 7 homolog (S. cerevisiae)-like |
| PYGM | phosphorylase, glycogen, muscle |
| RAMP3 | receptor (G protein-coupled) activity modifying protein 3 |
| RASIP1 | Ras interacting protein 1 |
| RBP1 | retinol binding protein 1, cellular |
| RLBP1 | retinaldehyde binding protein 1 |
| RPL39L | ribosomal protein L39-like |
| RPUSD2 | RNA pseudouridylate synthase domain containing 2 |
| RRP9 | ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast) |
| SETMAR | SET domain and mariner transposase fusion gene |
| SGK2 | serum/glucocorticoid regulated kinase 2 |
| SLC30A1 | solute carrier family 30 (zinc transporter), member 1 |
| SLC34A2 | solute carrier family 34 (type II sodium/phosphate cotransporter), member 2 |
| SLC39A4 | solute carrier family 39 (zinc transporter), member 4 |
| SLC7A5 | solute carrier family 7 (amino acid transporter light chain, L system), member 5 |
| SMAD5-AS1 | SMAD5 antisense RNA 1 |
| SNORA21 | small nucleolar RNA, H/ACA box 21 |
| SPEF1 | sperm flagellar 1 |
| SPON2 | spondin 2, extracellular matrix protein |
| SSSCA1 | Sjogren syndrome/scleroderma autoantigen 1 |
| STRA6 | stimulated by retinoic acid 6 |
| SUSD4 | sushi domain containing 4 |
| SUSD6 | sushi domain containing 6 |
| TAS2R1 | taste receptor, type 2, member 1 |
| TCEAL1 | transcription elongation factor A (SII)-like 1 |
| TMA16 | translation machinery associated 16 homolog (S. cerevisiae) |
| TMEM180 | transmembrane protein 180 |
| TSPO2 | translocator protein 2 |
| TULP4 | tubby like protein 4 |
| UTP20 | UTP20, small subunit (SSU) processome component, homolog (yeast) |
| WDR46 | WD repeat domain 46 |
