| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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200 genes differentially expressed following the tretinoin-6170 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ADD3 | adducin 3 (gamma) |
| ADM | adrenomedullin |
| AIM2 | absent in melanoma 2 |
| ANGPTL4 | angiopoietin-like 4 |
| APBB1IP | amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein |
| ARHGEF10L | Rho guanine nucleotide exchange factor (GEF) 10-like |
| ARHGEF3 | Rho guanine nucleotide exchange factor (GEF) 3 |
| ATP13A2 | ATPase type 13A2 |
| BCL2A1 | BCL2-related protein A1 |
| BCL6 | B-cell CLL/lymphoma 6 |
| C1ORF106 | chromosome 1 open reading frame 106 |
| CASP9 | caspase 9, apoptosis-related cysteine peptidase |
| CCL20 | chemokine (C-C motif) ligand 20 |
| CCR1 | chemokine (C-C motif) receptor 1 |
| CD1D | CD1d molecule |
| CD36 | CD36 molecule (thrombospondin receptor) |
| CD38 | CD38 molecule |
| CFP | complement factor properdin |
| CHI3L1 | chitinase 3-like 1 (cartilage glycoprotein-39) |
| COL4A2 | collagen, type IV, alpha 2 |
| COLEC12 | collectin sub-family member 12 |
| CYP26A1 | cytochrome P450, family 26, subfamily A, polypeptide 1 |
| CYP26B1 | cytochrome P450, family 26, subfamily B, polypeptide 1 |
| DAPK1 | death-associated protein kinase 1 |
| DHRS3 | dehydrogenase/reductase (SDR family) member 3 |
| DNAJB12 | DnaJ (Hsp40) homolog, subfamily B, member 12 |
| EFNB2 | ephrin-B2 |
| EMP2 | epithelial membrane protein 2 |
| ENDOD1 | endonuclease domain containing 1 |
| ENPP2 | ectonucleotide pyrophosphatase/phosphodiesterase 2 |
| EXPH5 | exophilin 5 |
| FAM134B | family with sequence similarity 134, member B |
| FAM13A | family with sequence similarity 13, member A |
| FBP1 | fructose-1,6-bisphosphatase 1 |
| FGF9 | fibroblast growth factor 9 |
| FGR | FGR proto-oncogene, Src family tyrosine kinase |
| FLNB | filamin B, beta |
| FLOT1 | flotillin 1 |
| FMO5 | flavin containing monooxygenase 5 |
| G0S2 | G0/G1 switch 2 |
| GALNT12 | polypeptide N-acetylgalactosaminyltransferase 12 |
| HAB1 | B1 for mucin |
| HBEGF | heparin-binding EGF-like growth factor |
| HOXA1 | homeobox A1 |
| HOXA4 | homeobox A4 |
| HOXA5 | homeobox A5 |
| HPD | 4-hydroxyphenylpyruvate dioxygenase |
| ICAM1 | intercellular adhesion molecule 1 |
| ID1 | inhibitor of DNA binding 1, dominant negative helix-loop-helix protein |
| IER3 | immediate early response 3 |
| IFI30 | interferon, gamma-inducible protein 30 |
| ITGA6 | integrin, alpha 6 |
| KIAA0513 | KIAA0513 |
| LAMB3 | laminin, beta 3 |
| LILRA5 | leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5 |
| MAFB | v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B |
| MAFF | v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F |
| MAN1A1 | mannosidase, alpha, class 1A, member 1 |
| MERTK | MER proto-oncogene, tyrosine kinase |
| MLXIPL | MLX interacting protein-like |
| MUC1 | mucin 1, cell surface associated |
| MYBPH | myosin binding protein H |
| NCF1C | neutrophil cytosolic factor 1C pseudogene |
| NFE2 | nuclear factor, erythroid 2 |
| NINJ1 | ninjurin 1 |
| NRIP1 | nuclear receptor interacting protein 1 |
| NTSR1 | neurotensin receptor 1 (high affinity) |
| P2RX5 | purinergic receptor P2X, ligand gated ion channel, 5 |
| PALLD | palladin, cytoskeletal associated protein |
| PDLIM5 | PDZ and LIM domain 5 |
| PHLDA1 | pleckstrin homology-like domain, family A, member 1 |
| PIK3CG | phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma |
| PMAIP1 | phorbol-12-myristate-13-acetate-induced protein 1 |
| POR | P450 (cytochrome) oxidoreductase |
| PPFIA4 | protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 |
| PRKCH | protein kinase C, eta |
| PTGES | prostaglandin E synthase |
| RAB20 | RAB20, member RAS oncogene family |
| RHOBTB3 | Rho-related BTB domain containing 3 |
| SEL1L3 | sel-1 suppressor of lin-12-like 3 (C. elegans) |
| SEMA6B | sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B |
| SERPINB1 | serpin peptidase inhibitor, clade B (ovalbumin), member 1 |
| SERPINB9 | serpin peptidase inhibitor, clade B (ovalbumin), member 9 |
| SERPINE1 | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 |
| SLA | Src-like-adaptor |
| SLC2A5 | solute carrier family 2 (facilitated glucose/fructose transporter), member 5 |
| SLC5A3 | solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 |
| SMAD3 | SMAD family member 3 |
| SMOX | spermine oxidase |
| SOAT1 | sterol O-acyltransferase 1 |
| STX11 | syntaxin 11 |
| TBC1D2 | TBC1 domain family, member 2 |
| TBL2 | transducin (beta)-like 2 |
| TGM2 | transglutaminase 2 |
| THBS1 | thrombospondin 1 |
| TIMP1 | TIMP metallopeptidase inhibitor 1 |
| TNNI2 | troponin I type 2 (skeletal, fast) |
| TREM1 | triggering receptor expressed on myeloid cells 1 |
| UPB1 | ureidopropionase, beta |
| UPP1 | uridine phosphorylase 1 |
| Symbol | Name |
|---|---|
| AEN | apoptosis enhancing nuclease |
| ANKRD28 | ankyrin repeat domain 28 |
| ANKRD55 | ankyrin repeat domain 55 |
| ATAT1 | alpha tubulin acetyltransferase 1 |
| ATXN2L | ataxin 2-like |
| BAHCC1 | BAH domain and coiled-coil containing 1 |
| BAMBI | BMP and activin membrane-bound inhibitor |
| BATF3 | basic leucine zipper transcription factor, ATF-like 3 |
| BCAS3 | breast carcinoma amplified sequence 3 |
| BCL11A | B-cell CLL/lymphoma 11A (zinc finger protein) |
| C2CD2 | C2 calcium-dependent domain containing 2 |
| C2ORF54 | chromosome 2 open reading frame 54 |
| CD1C | CD1c molecule |
| CD69 | CD69 molecule |
| CDK20 | cyclin-dependent kinase 20 |
| CES3 | carboxylesterase 3 |
| CGREF1 | cell growth regulator with EF-hand domain 1 |
| CHAC1 | ChaC glutathione-specific gamma-glutamylcyclotransferase 1 |
| CHRNA5 | cholinergic receptor, nicotinic, alpha 5 (neuronal) |
| CHST2 | carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2 |
| CIC | capicua transcriptional repressor |
| CLEC4E | C-type lectin domain family 4, member E |
| CLEC5A | C-type lectin domain family 5, member A |
| COX6A2 | cytochrome c oxidase subunit VIa polypeptide 2 |
| CPA4 | carboxypeptidase A4 |
| CPNE7 | copine VII |
| CTSG | cathepsin G |
| DDN | dendrin |
| DEPTOR | DEP domain containing MTOR-interacting protein |
| EEF2KMT | eukaryotic elongation factor 2 lysine methyltransferase |
| EHHADH | enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase |
| FAM131A | family with sequence similarity 131, member A |
| FAM86B1 | family with sequence similarity 86, member B1 |
| FKBP5 | FK506 binding protein 5 |
| GAA | glucosidase, alpha; acid |
| GABRA4 | gamma-aminobutyric acid (GABA) A receptor, alpha 4 |
| GALK1 | galactokinase 1 |
| HCN4 | hyperpolarization activated cyclic nucleotide gated potassium channel 4 |
| HMGA2 | high mobility group AT-hook 2 |
| HNRNPA3P1 | heterogeneous nuclear ribonucleoprotein A3 pseudogene 1 |
| HTRA1 | HtrA serine peptidase 1 |
| HYAL3 | hyaluronoglucosaminidase 3 |
| IDI2-AS1 | IDI2 antisense RNA 1 |
| IGFBP4 | insulin-like growth factor binding protein 4 |
| IL1R2 | interleukin 1 receptor, type II |
| IL4R | interleukin 4 receptor |
| INO80D | INO80 complex subunit D |
| IRX5 | iroquois homeobox 5 |
| ISG15 | ISG15 ubiquitin-like modifier |
| KLF1 | Kruppel-like factor 1 (erythroid) |
| LOC157562 | uncharacterized LOC157562 |
| LRFN4 | leucine rich repeat and fibronectin type III domain containing 4 |
| LRP5 | low density lipoprotein receptor-related protein 5 |
| LSM14B | LSM14B, SCD6 homolog B (S. cerevisiae) |
| MAP6D1 | MAP6 domain containing 1 |
| MEFV | Mediterranean fever |
| METTL8 | methyltransferase like 8 |
| MICAL3 | microtubule associated monooxygenase, calponin and LIM domain containing 3 |
| MKL2 | MKL/myocardin-like 2 |
| MTA2 | metastasis associated 1 family, member 2 |
| MX1 | MX dynamin-like GTPase 1 |
| MYC | v-myc avian myelocytomatosis viral oncogene homolog |
| MYO15A | myosin XVA |
| NAT6 | N-acetyltransferase 6 (GCN5-related) |
| NCS1 | neuronal calcium sensor 1 |
| NFE2L3 | nuclear factor, erythroid 2-like 3 |
| NR1D2 | nuclear receptor subfamily 1, group D, member 2 |
| NTHL1 | nth endonuclease III-like 1 (E. coli) |
| OAS3 | 2'-5'-oligoadenylate synthetase 3, 100kDa |
| OMG | oligodendrocyte myelin glycoprotein |
| PFN2 | profilin 2 |
| PID1 | phosphotyrosine interaction domain containing 1 |
| PLA2G7 | phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) |
| PLCB3 | phospholipase C, beta 3 (phosphatidylinositol-specific) |
| PLP1 | proteolipid protein 1 |
| POLH | polymerase (DNA directed), eta |
| POMGNT1 | protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) |
| PRKCE | protein kinase C, epsilon |
| PRY | PTPN13-like, Y-linked |
| PTX3 | pentraxin 3, long |
| QTRT1 | queuine tRNA-ribosyltransferase 1 |
| RGS19 | regulator of G-protein signaling 19 |
| RNF126P1 | ring finger protein 126 pseudogene 1 |
| SCAMP5 | secretory carrier membrane protein 5 |
| SETD1A | SET domain containing 1A |
| SLC1A3 | solute carrier family 1 (glial high affinity glutamate transporter), member 3 |
| SLC7A2 | solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 |
| SNHG3 | small nucleolar RNA host gene 3 |
| TM6SF1 | transmembrane 6 superfamily member 1 |
| TNFRSF12A | tumor necrosis factor receptor superfamily, member 12A |
| TNNT1 | troponin T type 1 (skeletal, slow) |
| TRAC | T cell receptor alpha constant |
| TTC4 | tetratricopeptide repeat domain 4 |
| TUBA3D | tubulin, alpha 3d |
| TUBB2A | tubulin, beta 2A class IIa |
| VNN1 | vanin 1 |
| WT1-AS | WT1 antisense RNA |
| XRCC3 | X-ray repair complementing defective repair in Chinese hamster cells 3 |
| ZNF219 | zinc finger protein 219 |
| ZNF528 | zinc finger protein 528 |
