| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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199 genes differentially expressed following the tretinoin-6971 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| AAGAB | alpha- and gamma-adaptin binding protein |
| AGPAT3 | 1-acylglycerol-3-phosphate O-acyltransferase 3 |
| ALDH1A3 | aldehyde dehydrogenase 1 family, member A3 |
| ALDH3B1 | aldehyde dehydrogenase 3 family, member B1 |
| AMPH | amphiphysin |
| AOAH | acyloxyacyl hydrolase (neutrophil) |
| ARHGDIB | Rho GDP dissociation inhibitor (GDI) beta |
| ARRB1 | arrestin, beta 1 |
| BCL3 | B-cell CLL/lymphoma 3 |
| BDKRB2 | bradykinin receptor B2 |
| BTG2 | BTG family, member 2 |
| C7ORF43 | chromosome 7 open reading frame 43 |
| CDH5 | cadherin 5, type 2 (vascular endothelium) |
| CLMN | calmin (calponin-like, transmembrane) |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CSTA | cystatin A (stefin A) |
| CYP26A1 | cytochrome P450, family 26, subfamily A, polypeptide 1 |
| CYP26B1 | cytochrome P450, family 26, subfamily B, polypeptide 1 |
| DCLK2 | doublecortin-like kinase 2 |
| DHRS2 | dehydrogenase/reductase (SDR family) member 2 |
| DHRS3 | dehydrogenase/reductase (SDR family) member 3 |
| DLK2 | delta-like 2 homolog (Drosophila) |
| DLX2 | distal-less homeobox 2 |
| EFNA3 | ephrin-A3 |
| ELF3 | E74-like factor 3 (ets domain transcription factor, epithelial-specific ) |
| EPAS1 | endothelial PAS domain protein 1 |
| ESR1 | estrogen receptor 1 |
| ESR2 | estrogen receptor 2 (ER beta) |
| FAM105A | family with sequence similarity 105, member A |
| FAM174B | family with sequence similarity 174, member B |
| FBRS | fibrosin |
| FGF4 | fibroblast growth factor 4 |
| GDPD5 | glycerophosphodiester phosphodiesterase domain containing 5 |
| HCAR3 | hydroxycarboxylic acid receptor 3 |
| HOXA1 | homeobox A1 |
| HOXA4 | homeobox A4 |
| HOXA5 | homeobox A5 |
| HOXB2 | homeobox B2 |
| HOXC10 | homeobox C10 |
| HOXC13 | homeobox C13 |
| ID1 | inhibitor of DNA binding 1, dominant negative helix-loop-helix protein |
| IGFBP3 | insulin-like growth factor binding protein 3 |
| IGHA1 | immunoglobulin heavy constant alpha 1 |
| IGHG1 | immunoglobulin heavy constant gamma 1 (G1m marker) |
| IRF1 | interferon regulatory factor 1 |
| ITPR1 | inositol 1,4,5-trisphosphate receptor, type 1 |
| KIAA0125 | KIAA0125 |
| KLK6 | kallikrein-related peptidase 6 |
| KRT15 | keratin 15, type I |
| LONP2 | lon peptidase 2, peroxisomal |
| MAP4 | microtubule-associated protein 4 |
| MYL4 | myosin, light chain 4, alkali; atrial, embryonic |
| NACA2 | nascent polypeptide-associated complex alpha subunit 2 |
| NANS | N-acetylneuraminic acid synthase |
| NEDD9 | neural precursor cell expressed, developmentally down-regulated 9 |
| OTUB2 | OTU deubiquitinase, ubiquitin aldehyde binding 2 |
| PDE3B | phosphodiesterase 3B, cGMP-inhibited |
| PDE4DIP | phosphodiesterase 4D interacting protein |
| PFKFB3 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 |
| PHLDA1 | pleckstrin homology-like domain, family A, member 1 |
| PLA2G10 | phospholipase A2, group X |
| PRKCD | protein kinase C, delta |
| PRR5 | proline rich 5 (renal) |
| PTGES | prostaglandin E synthase |
| PTGS1 | prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) |
| RAB11B | RAB11B, member RAS oncogene family |
| RGS16 | regulator of G-protein signaling 16 |
| RGS2 | regulator of G-protein signaling 2 |
| ROM1 | retinal outer segment membrane protein 1 |
| RPLP2 | ribosomal protein, large, P2 |
| SAP30 | Sin3A-associated protein, 30kDa |
| SAT1 | spermidine/spermine N1-acetyltransferase 1 |
| SCNN1A | sodium channel, non voltage gated 1 alpha subunit |
| SELL | selectin L |
| SIGLEC15 | sialic acid binding Ig-like lectin 15 |
| SIK1 | salt-inducible kinase 1 |
| SIRT3 | sirtuin 3 |
| SIX1 | SIX homeobox 1 |
| SKAP2 | src kinase associated phosphoprotein 2 |
| SLC22A4 | solute carrier family 22 (organic cation/zwitterion transporter), member 4 |
| SLC22A5 | solute carrier family 22 (organic cation/carnitine transporter), member 5 |
| SLC25A37 | solute carrier family 25 (mitochondrial iron transporter), member 37 |
| SLC35C1 | solute carrier family 35 (GDP-fucose transporter), member C1 |
| SOX9 | SRY (sex determining region Y)-box 9 |
| STX7 | syntaxin 7 |
| SUGP1 | SURP and G patch domain containing 1 |
| TCP11L1 | t-complex 11, testis-specific-like 1 |
| TGFBI | transforming growth factor, beta-induced, 68kDa |
| TGM2 | transglutaminase 2 |
| TLE1 | transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) |
| TMPRSS2 | transmembrane protease, serine 2 |
| TMPRSS4 | transmembrane protease, serine 4 |
| TNFAIP2 | tumor necrosis factor, alpha-induced protein 2 |
| TRIM31 | tripartite motif containing 31 |
| TSC22D3 | TSC22 domain family, member 3 |
| TUBA3C | tubulin, alpha 3c |
| ZHX3 | zinc fingers and homeoboxes 3 |
| ZNF16 | zinc finger protein 16 |
| ZNF419 | zinc finger protein 419 |
| ZNF609 | zinc finger protein 609 |
| Symbol | Name |
|---|---|
| AGBL5 | ATP/GTP binding protein-like 5 |
| AMIGO2 | adhesion molecule with Ig-like domain 2 |
| AMOTL2 | angiomotin like 2 |
| ANKRD36B | ankyrin repeat domain 36B |
| ARHGAP11A | Rho GTPase activating protein 11A |
| ARHGEF3 | Rho guanine nucleotide exchange factor (GEF) 3 |
| ARHGEF5 | Rho guanine nucleotide exchange factor (GEF) 5 |
| ATAD3A | ATPase family, AAA domain containing 3A |
| C10ORF88 | chromosome 10 open reading frame 88 |
| C16ORF59 | chromosome 16 open reading frame 59 |
| C17ORF62 | chromosome 17 open reading frame 62 |
| C1ORF115 | chromosome 1 open reading frame 115 |
| C1ORF56 | chromosome 1 open reading frame 56 |
| C3ORF52 | chromosome 3 open reading frame 52 |
| CALHM2 | calcium homeostasis modulator 2 |
| CCDC15 | coiled-coil domain containing 15 |
| CCDC25 | coiled-coil domain containing 25 |
| CEBPA | CCAAT/enhancer binding protein (C/EBP), alpha |
| CGREF1 | cell growth regulator with EF-hand domain 1 |
| CISH | cytokine inducible SH2-containing protein |
| CLSPN | claspin |
| CYP20A1 | cytochrome P450, family 20, subfamily A, polypeptide 1 |
| DDIT3 | DNA-damage-inducible transcript 3 |
| DNAL4 | dynein, axonemal, light chain 4 |
| EFHD1 | EF-hand domain family, member D1 |
| EGR3 | early growth response 3 |
| FAM192A | family with sequence similarity 192, member A |
| FAM222B | family with sequence similarity 222, member B |
| FKBP10 | FK506 binding protein 10, 65 kDa |
| FSD1 | fibronectin type III and SPRY domain containing 1 |
| GHR | growth hormone receptor |
| GMIP | GEM interacting protein |
| GNA12 | guanine nucleotide binding protein (G protein) alpha 12 |
| GPRC5C | G protein-coupled receptor, class C, group 5, member C |
| GRAMD3 | GRAM domain containing 3 |
| GSTT1 | glutathione S-transferase theta 1 |
| H2AFY2 | H2A histone family, member Y2 |
| HS1BP3 | HCLS1 binding protein 3 |
| IGSF3 | immunoglobulin superfamily, member 3 |
| IRF2 | interferon regulatory factor 2 |
| ITGA2 | integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) |
| KIAA0556 | KIAA0556 |
| KLHL12 | kelch-like family member 12 |
| LCP1 | lymphocyte cytosolic protein 1 (L-plastin) |
| LINC00115 | long intergenic non-protein coding RNA 115 |
| LOC100287590 | uncharacterized LOC100287590 |
| MAFB | v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B |
| MAGEF1 | melanoma antigen family F1 |
| MAMLD1 | mastermind-like domain containing 1 |
| MARC1 | mitochondrial amidoxime reducing component 1 |
| MICB | MHC class I polypeptide-related sequence B |
| MLLT11 | myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11 |
| MMP9 | matrix metallopeptidase 9 |
| MSX1 | msh homeobox 1 |
| MXD3 | MAX dimerization protein 3 |
| MYL12A | myosin, light chain 12A, regulatory, non-sarcomeric |
| MYLIP | myosin regulatory light chain interacting protein |
| NADSYN1 | NAD synthetase 1 |
| NES | nestin |
| NPY1R | neuropeptide Y receptor Y1 |
| NR1H2 | nuclear receptor subfamily 1, group H, member 2 |
| NXN | nucleoredoxin |
| OGFRL1 | opioid growth factor receptor-like 1 |
| PAFAH1B2 | platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa) |
| PAQR4 | progestin and adipoQ receptor family member IV |
| PCF11 | PCF11 cleavage and polyadenylation factor subunit |
| PMM1 | phosphomannomutase 1 |
| PMP22 | peripheral myelin protein 22 |
| PPP1R13L | protein phosphatase 1, regulatory subunit 13 like |
| PTPN13 | protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) |
| RAPGEFL1 | Rap guanine nucleotide exchange factor (GEF)-like 1 |
| RBM41 | RNA binding motif protein 41 |
| RECQL4 | RecQ protein-like 4 |
| RPS6KA4 | ribosomal protein S6 kinase, 90kDa, polypeptide 4 |
| SCAMP4 | secretory carrier membrane protein 4 |
| SGK1 | serum/glucocorticoid regulated kinase 1 |
| SHARPIN | SHANK-associated RH domain interactor |
| SIGIRR | single immunoglobulin and toll-interleukin 1 receptor (TIR) domain |
| SLC25A40 | solute carrier family 25, member 40 |
| SLC2A10 | solute carrier family 2 (facilitated glucose transporter), member 10 |
| SLC35C2 | solute carrier family 35 (GDP-fucose transporter), member C2 |
| SLC6A14 | solute carrier family 6 (amino acid transporter), member 14 |
| SMPDL3A | sphingomyelin phosphodiesterase, acid-like 3A |
| SPIDR | scaffolding protein involved in DNA repair |
| STAG3 | stromal antigen 3 |
| STX5 | syntaxin 5 |
| THAP7 | THAP domain containing 7 |
| TMEM8A | transmembrane protein 8A |
| TRMU | tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase |
| TRPS1 | trichorhinophalangeal syndrome I |
| TULP4 | tubby like protein 4 |
| UBQLN4 | ubiquilin 4 |
| XYLT2 | xylosyltransferase II |
| ZFP30 | ZFP30 zinc finger protein |
| ZNF14 | zinc finger protein 14 |
| ZNF143 | zinc finger protein 143 |
| ZNF408 | zinc finger protein 408 |
| ZNF586 | zinc finger protein 586 |
| ZNF668 | zinc finger protein 668 |
