| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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198 genes differentially expressed following the tretinoin-966 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| AJAP1 | adherens junctions associated protein 1 |
| ALDH1A3 | aldehyde dehydrogenase 1 family, member A3 |
| ALDH3B1 | aldehyde dehydrogenase 3 family, member B1 |
| AOX1 | aldehyde oxidase 1 |
| BCL3 | B-cell CLL/lymphoma 3 |
| BDKRB2 | bradykinin receptor B2 |
| BTG2 | BTG family, member 2 |
| C1ORF112 | chromosome 1 open reading frame 112 |
| CASP9 | caspase 9, apoptosis-related cysteine peptidase |
| CCNO | cyclin O |
| CD22 | CD22 molecule |
| CDH5 | cadherin 5, type 2 (vascular endothelium) |
| CLMN | calmin (calponin-like, transmembrane) |
| CORO2A | coronin, actin binding protein, 2A |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CSTA | cystatin A (stefin A) |
| CUL3 | cullin 3 |
| CYLD | cylindromatosis (turban tumor syndrome) |
| CYP26A1 | cytochrome P450, family 26, subfamily A, polypeptide 1 |
| CYP26B1 | cytochrome P450, family 26, subfamily B, polypeptide 1 |
| DAPK2 | death-associated protein kinase 2 |
| DEGS1 | delta(4)-desaturase, sphingolipid 1 |
| DHRS3 | dehydrogenase/reductase (SDR family) member 3 |
| DOPEY2 | dopey family member 2 |
| DUSP4 | dual specificity phosphatase 4 |
| DVL2 | dishevelled segment polarity protein 2 |
| ELF3 | E74-like factor 3 (ets domain transcription factor, epithelial-specific ) |
| EPAS1 | endothelial PAS domain protein 1 |
| EPB41L1 | erythrocyte membrane protein band 4.1-like 1 |
| FAM174B | family with sequence similarity 174, member B |
| FBLN1 | fibulin 1 |
| FZD5 | frizzled class receptor 5 |
| GDPD5 | glycerophosphodiester phosphodiesterase domain containing 5 |
| GK3P | glycerol kinase 3 pseudogene |
| GPRC5A | G protein-coupled receptor, class C, group 5, member A |
| HHEX | hematopoietically expressed homeobox |
| HNRNPA0 | heterogeneous nuclear ribonucleoprotein A0 |
| HOXA1 | homeobox A1 |
| HOXA4 | homeobox A4 |
| HOXA5 | homeobox A5 |
| HOXB2 | homeobox B2 |
| HOXC13 | homeobox C13 |
| ID1 | inhibitor of DNA binding 1, dominant negative helix-loop-helix protein |
| IGFBP3 | insulin-like growth factor binding protein 3 |
| ITPR1 | inositol 1,4,5-trisphosphate receptor, type 1 |
| KAT6B | K(lysine) acetyltransferase 6B |
| KIAA0125 | KIAA0125 |
| KIF13B | kinesin family member 13B |
| KLHL24 | kelch-like family member 24 |
| KLK6 | kallikrein-related peptidase 6 |
| KRT15 | keratin 15, type I |
| LMNA | lamin A/C |
| LRP12 | low density lipoprotein receptor-related protein 12 |
| LRP5 | low density lipoprotein receptor-related protein 5 |
| MAP1B | microtubule-associated protein 1B |
| MAPK8 | mitogen-activated protein kinase 8 |
| NAV2 | neuron navigator 2 |
| NPM3 | nucleophosmin/nucleoplasmin 3 |
| NR4A2 | nuclear receptor subfamily 4, group A, member 2 |
| NUDT13 | nudix (nucleoside diphosphate linked moiety X)-type motif 13 |
| OTUB2 | OTU deubiquitinase, ubiquitin aldehyde binding 2 |
| PEX26 | peroxisomal biogenesis factor 26 |
| PHLDA1 | pleckstrin homology-like domain, family A, member 1 |
| PIP5K1A | phosphatidylinositol-4-phosphate 5-kinase, type I, alpha |
| PLA2G10 | phospholipase A2, group X |
| PPIL2 | peptidylprolyl isomerase (cyclophilin)-like 2 |
| PPP3R1 | protein phosphatase 3, regulatory subunit B, alpha |
| PRKCD | protein kinase C, delta |
| PRR5 | proline rich 5 (renal) |
| PSG9 | pregnancy specific beta-1-glycoprotein 9 |
| PSME4 | proteasome (prosome, macropain) activator subunit 4 |
| PTGS1 | prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) |
| RAP1GAP | RAP1 GTPase activating protein |
| RGS16 | regulator of G-protein signaling 16 |
| SAT1 | spermidine/spermine N1-acetyltransferase 1 |
| SCNN1A | sodium channel, non voltage gated 1 alpha subunit |
| SELL | selectin L |
| SIK1 | salt-inducible kinase 1 |
| SIX1 | SIX homeobox 1 |
| SKAP2 | src kinase associated phosphoprotein 2 |
| SLC22A4 | solute carrier family 22 (organic cation/zwitterion transporter), member 4 |
| SLC22A5 | solute carrier family 22 (organic cation/carnitine transporter), member 5 |
| SLC23A2 | solute carrier family 23 (ascorbic acid transporter), member 2 |
| SMAD3 | SMAD family member 3 |
| SOX9 | SRY (sex determining region Y)-box 9 |
| ST3GAL4 | ST3 beta-galactoside alpha-2,3-sialyltransferase 4 |
| TAGLN | transgelin |
| TENM4 | teneurin transmembrane protein 4 |
| TGFBI | transforming growth factor, beta-induced, 68kDa |
| TGFBR1 | transforming growth factor, beta receptor 1 |
| TGM2 | transglutaminase 2 |
| TMEM209 | transmembrane protein 209 |
| TMPRSS2 | transmembrane protease, serine 2 |
| TMPRSS4 | transmembrane protease, serine 4 |
| TNFAIP2 | tumor necrosis factor, alpha-induced protein 2 |
| TRIM2 | tripartite motif containing 2 |
| TSC22D3 | TSC22 domain family, member 3 |
| TSKU | tsukushi, small leucine rich proteoglycan |
| UBOX5 | U-box domain containing 5 |
| ZNF710 | zinc finger protein 710 |
| Symbol | Name |
|---|---|
| ABCC5 | ATP-binding cassette, sub-family C (CFTR/MRP), member 5 |
| AGO3 | argonaute RISC catalytic component 3 |
| ALKBH4 | alkB, alkylation repair homolog 4 (E. coli) |
| AMOTL2 | angiomotin like 2 |
| ANKRD36B | ankyrin repeat domain 36B |
| AP4M1 | adaptor-related protein complex 4, mu 1 subunit |
| ARID5B | AT rich interactive domain 5B (MRF1-like) |
| ARL4A | ADP-ribosylation factor-like 4A |
| ASPHD1 | aspartate beta-hydroxylase domain containing 1 |
| ASPSCR1 | alveolar soft part sarcoma chromosome region, candidate 1 |
| AXIN1 | axin 1 |
| BCAR3 | breast cancer anti-estrogen resistance 3 |
| BEX4 | brain expressed, X-linked 4 |
| BRINP3 | bone morphogenetic protein/retinoic acid inducible neural-specific 3 |
| C11ORF68 | chromosome 11 open reading frame 68 |
| C11ORF95 | chromosome 11 open reading frame 95 |
| C1ORF115 | chromosome 1 open reading frame 115 |
| C3ORF52 | chromosome 3 open reading frame 52 |
| CALHM2 | calcium homeostasis modulator 2 |
| CDKN1A | cyclin-dependent kinase inhibitor 1A (p21, Cip1) |
| CLUHP3 | clustered mitochondria (cluA/CLU1) homolog pseudogene 3 |
| CTAGE9 | CTAGE family, member 9 |
| CYP27B1 | cytochrome P450, family 27, subfamily B, polypeptide 1 |
| DENND5A | DENN/MADD domain containing 5A |
| DNAJC24 | DnaJ (Hsp40) homolog, subfamily C, member 24 |
| DUSP8 | dual specificity phosphatase 8 |
| EFHC1 | EF-hand domain (C-terminal) containing 1 |
| EGR3 | early growth response 3 |
| EOGT | EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase |
| EPHA2 | EPH receptor A2 |
| FA2H | fatty acid 2-hydroxylase |
| FADS3 | fatty acid desaturase 3 |
| FICD | FIC domain containing |
| FMO4 | flavin containing monooxygenase 4 |
| GHR | growth hormone receptor |
| GNL1 | guanine nucleotide binding protein-like 1 |
| GRAMD3 | GRAM domain containing 3 |
| HJURP | Holliday junction recognition protein |
| ID3 | inhibitor of DNA binding 3, dominant negative helix-loop-helix protein |
| IGSF3 | immunoglobulin superfamily, member 3 |
| INF2 | inverted formin, FH2 and WH2 domain containing |
| IPP | intracisternal A particle-promoted polypeptide |
| IRF3 | interferon regulatory factor 3 |
| JAG2 | jagged 2 |
| LOC100287590 | uncharacterized LOC100287590 |
| LRIG1 | leucine-rich repeats and immunoglobulin-like domains 1 |
| MISP | mitotic spindle positioning |
| MT1H | metallothionein 1H |
| MTMR11 | myotubularin related protein 11 |
| MUL1 | mitochondrial E3 ubiquitin protein ligase 1 |
| MUS81 | MUS81 structure-specific endonuclease subunit |
| MYBL1 | v-myb avian myeloblastosis viral oncogene homolog-like 1 |
| NEIL3 | nei endonuclease VIII-like 3 (E. coli) |
| NFE2L3 | nuclear factor, erythroid 2-like 3 |
| NPY1R | neuropeptide Y receptor Y1 |
| NPY5R | neuropeptide Y receptor Y5 |
| PIK3R1 | phosphoinositide-3-kinase, regulatory subunit 1 (alpha) |
| PLCXD1 | phosphatidylinositol-specific phospholipase C, X domain containing 1 |
| PODXL | podocalyxin-like |
| PPP1R13L | protein phosphatase 1, regulatory subunit 13 like |
| PRKRIP1 | PRKR interacting protein 1 (IL11 inducible) |
| RAD9A | RAD9 homolog A (S. pombe) |
| RAPGEFL1 | Rap guanine nucleotide exchange factor (GEF)-like 1 |
| RGS17 | regulator of G-protein signaling 17 |
| RHBDF1 | rhomboid 5 homolog 1 (Drosophila) |
| RHOB | ras homolog family member B |
| RIC8B | RIC8 guanine nucleotide exchange factor B |
| SERTAD3 | SERTA domain containing 3 |
| SGTA | small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha |
| SLC6A14 | solute carrier family 6 (amino acid transporter), member 14 |
| SMAD7 | SMAD family member 7 |
| SMPDL3A | sphingomyelin phosphodiesterase, acid-like 3A |
| SNHG20 | small nucleolar RNA host gene 20 |
| ST6GALNAC2 | ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 |
| STBD1 | starch binding domain 1 |
| SULF1 | sulfatase 1 |
| SUZ12P1 | suppressor of zeste 12 homolog pseudogene 1 |
| THAP1 | THAP domain containing, apoptosis associated protein 1 |
| TIMM17B | translocase of inner mitochondrial membrane 17 homolog B (yeast) |
| TINF2 | TERF1 (TRF1)-interacting nuclear factor 2 |
| TMEM39B | transmembrane protein 39B |
| TNFRSF12A | tumor necrosis factor receptor superfamily, member 12A |
| TRAF5 | TNF receptor-associated factor 5 |
| TRAF6 | TNF receptor-associated factor 6, E3 ubiquitin protein ligase |
| TRAPPC2 | trafficking protein particle complex 2 |
| TRPM4 | transient receptor potential cation channel, subfamily M, member 4 |
| UAP1L1 | UDP-N-acetylglucosamine pyrophosphorylase 1 like 1 |
| USP5 | ubiquitin specific peptidase 5 (isopeptidase T) |
| YEATS2 | YEATS domain containing 2 |
| ZNF160 | zinc finger protein 160 |
| ZNF23 | zinc finger protein 23 |
| ZNF248 | zinc finger protein 248 |
| ZNF408 | zinc finger protein 408 |
| ZNF574 | zinc finger protein 574 |
| ZNF611 | zinc finger protein 611 |
| ZNF639 | zinc finger protein 639 |
| ZNHIT2 | zinc finger, HIT-type containing 2 |
| ZSCAN9 | zinc finger and SCAN domain containing 9 |
