| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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200 genes differentially expressed following the tretinoin-991 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ADAM19 | ADAM metallopeptidase domain 19 |
| AJAP1 | adherens junctions associated protein 1 |
| ALDH1A3 | aldehyde dehydrogenase 1 family, member A3 |
| AOX1 | aldehyde oxidase 1 |
| AP4E1 | adaptor-related protein complex 4, epsilon 1 subunit |
| ARHGDIB | Rho GDP dissociation inhibitor (GDI) beta |
| ATN1 | atrophin 1 |
| BDKRB2 | bradykinin receptor B2 |
| BTG2 | BTG family, member 2 |
| C1ORF112 | chromosome 1 open reading frame 112 |
| CACNA1D | calcium channel, voltage-dependent, L type, alpha 1D subunit |
| CASP9 | caspase 9, apoptosis-related cysteine peptidase |
| CCNO | cyclin O |
| CDH5 | cadherin 5, type 2 (vascular endothelium) |
| CHML | choroideremia-like (Rab escort protein 2) |
| CLCN5 | chloride channel, voltage-sensitive 5 |
| CLMN | calmin (calponin-like, transmembrane) |
| COPZ2 | coatomer protein complex, subunit zeta 2 |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CSTA | cystatin A (stefin A) |
| CYP26A1 | cytochrome P450, family 26, subfamily A, polypeptide 1 |
| CYP26B1 | cytochrome P450, family 26, subfamily B, polypeptide 1 |
| DAPK2 | death-associated protein kinase 2 |
| DEGS1 | delta(4)-desaturase, sphingolipid 1 |
| DHRS3 | dehydrogenase/reductase (SDR family) member 3 |
| ELF3 | E74-like factor 3 (ets domain transcription factor, epithelial-specific ) |
| EMID1 | EMI domain containing 1 |
| EPAS1 | endothelial PAS domain protein 1 |
| EPB41L1 | erythrocyte membrane protein band 4.1-like 1 |
| FAM105A | family with sequence similarity 105, member A |
| FAM174B | family with sequence similarity 174, member B |
| GDPD5 | glycerophosphodiester phosphodiesterase domain containing 5 |
| HCAR3 | hydroxycarboxylic acid receptor 3 |
| HDAC7 | histone deacetylase 7 |
| HOXA1 | homeobox A1 |
| HOXA4 | homeobox A4 |
| HOXA5 | homeobox A5 |
| HOXB2 | homeobox B2 |
| HOXC13 | homeobox C13 |
| HTR1E | 5-hydroxytryptamine (serotonin) receptor 1E, G protein-coupled |
| ID1 | inhibitor of DNA binding 1, dominant negative helix-loop-helix protein |
| IFT38 | intraflagellar transport 38 |
| IGFBP3 | insulin-like growth factor binding protein 3 |
| IGHG1 | immunoglobulin heavy constant gamma 1 (G1m marker) |
| IRF1 | interferon regulatory factor 1 |
| ITPR1 | inositol 1,4,5-trisphosphate receptor, type 1 |
| KAT6B | K(lysine) acetyltransferase 6B |
| KIAA0125 | KIAA0125 |
| KLK6 | kallikrein-related peptidase 6 |
| KMT2A | lysine (K)-specific methyltransferase 2A |
| KRT13 | keratin 13, type I |
| LIMCH1 | LIM and calponin homology domains 1 |
| MAG | myelin associated glycoprotein |
| MEIS2 | Meis homeobox 2 |
| NAV2 | neuron navigator 2 |
| NR5A2 | nuclear receptor subfamily 5, group A, member 2 |
| PBX1 | pre-B-cell leukemia homeobox 1 |
| PCDH12 | protocadherin 12 |
| PDE4DIP | phosphodiesterase 4D interacting protein |
| PDE8B | phosphodiesterase 8B |
| PFKFB3 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 |
| PHLDA1 | pleckstrin homology-like domain, family A, member 1 |
| PLA2G10 | phospholipase A2, group X |
| PPIL2 | peptidylprolyl isomerase (cyclophilin)-like 2 |
| PRKCD | protein kinase C, delta |
| PTGES | prostaglandin E synthase |
| PTGS1 | prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) |
| RAB3A | RAB3A, member RAS oncogene family |
| RAP1GAP | RAP1 GTPase activating protein |
| RGS16 | regulator of G-protein signaling 16 |
| RNASEL | ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent) |
| SCLY | selenocysteine lyase |
| SCNN1A | sodium channel, non voltage gated 1 alpha subunit |
| SELL | selectin L |
| SERPINA5 | serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5 |
| SIK1 | salt-inducible kinase 1 |
| SKAP2 | src kinase associated phosphoprotein 2 |
| SLC22A4 | solute carrier family 22 (organic cation/zwitterion transporter), member 4 |
| SLC22A5 | solute carrier family 22 (organic cation/carnitine transporter), member 5 |
| SLC35C1 | solute carrier family 35 (GDP-fucose transporter), member C1 |
| SLC4A8 | solute carrier family 4, sodium bicarbonate cotransporter, member 8 |
| SMAD3 | SMAD family member 3 |
| SOX9 | SRY (sex determining region Y)-box 9 |
| TFPI2 | tissue factor pathway inhibitor 2 |
| TGFBI | transforming growth factor, beta-induced, 68kDa |
| TLE4 | transducin-like enhancer of split 4 |
| TMEM144 | transmembrane protein 144 |
| TMPRSS2 | transmembrane protease, serine 2 |
| TMPRSS4 | transmembrane protease, serine 4 |
| TNFAIP2 | tumor necrosis factor, alpha-induced protein 2 |
| TNK1 | tyrosine kinase, non-receptor, 1 |
| TPMT | thiopurine S-methyltransferase |
| TRIM2 | tripartite motif containing 2 |
| TRIM31 | tripartite motif containing 31 |
| TSC22D3 | TSC22 domain family, member 3 |
| VGF | VGF nerve growth factor inducible |
| ZFP36L2 | ZFP36 ring finger protein-like 2 |
| ZNF227 | zinc finger protein 227 |
| ZNF614 | zinc finger protein 614 |
| ZNF710 | zinc finger protein 710 |
| Symbol | Name |
|---|---|
| ABCC6 | ATP-binding cassette, sub-family C (CFTR/MRP), member 6 |
| ADAM15 | ADAM metallopeptidase domain 15 |
| ADGRE5 | adhesion G protein-coupled receptor E5 |
| ADM | adrenomedullin |
| AGPAT3 | 1-acylglycerol-3-phosphate O-acyltransferase 3 |
| AMIGO2 | adhesion molecule with Ig-like domain 2 |
| ARHGEF26 | Rho guanine nucleotide exchange factor (GEF) 26 |
| ARID5B | AT rich interactive domain 5B (MRF1-like) |
| ARL4A | ADP-ribosylation factor-like 4A |
| ASPSCR1 | alveolar soft part sarcoma chromosome region, candidate 1 |
| BCL11B | B-cell CLL/lymphoma 11B (zinc finger protein) |
| BMP4 | bone morphogenetic protein 4 |
| BRINP3 | bone morphogenetic protein/retinoic acid inducible neural-specific 3 |
| C3ORF52 | chromosome 3 open reading frame 52 |
| CABYR | calcium binding tyrosine-(Y)-phosphorylation regulated |
| CAMTA2 | calmodulin binding transcription activator 2 |
| CCDC88C | coiled-coil domain containing 88C |
| CD302 | CD302 molecule |
| CDKN1A | cyclin-dependent kinase inhibitor 1A (p21, Cip1) |
| CEBPA | CCAAT/enhancer binding protein (C/EBP), alpha |
| CENPT | centromere protein T |
| CISH | cytokine inducible SH2-containing protein |
| CYP1A1 | cytochrome P450, family 1, subfamily A, polypeptide 1 |
| DDX54 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 |
| DNAJC22 | DnaJ (Hsp40) homolog, subfamily C, member 22 |
| DYRK3 | dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 |
| EGR3 | early growth response 3 |
| EVL | Enah/Vasp-like |
| FOSL1 | FOS-like antigen 1 |
| FZD4 | frizzled class receptor 4 |
| GLB1L2 | galactosidase, beta 1-like 2 |
| GNL1 | guanine nucleotide binding protein-like 1 |
| GPATCH3 | G patch domain containing 3 |
| GPRC5C | G protein-coupled receptor, class C, group 5, member C |
| HEY2 | hes-related family bHLH transcription factor with YRPW motif 2 |
| HSD17B11 | hydroxysteroid (17-beta) dehydrogenase 11 |
| IGSF3 | immunoglobulin superfamily, member 3 |
| IL4R | interleukin 4 receptor |
| IRF2 | interferon regulatory factor 2 |
| KCNN4 | potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 4 |
| KCNS3 | potassium voltage-gated channel, modifier subfamily S, member 3 |
| KLF11 | Kruppel-like factor 11 |
| LRP3 | low density lipoprotein receptor-related protein 3 |
| LRRC49 | leucine rich repeat containing 49 |
| LYPD3 | LY6/PLAUR domain containing 3 |
| MAFB | v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B |
| MAST3 | microtubule associated serine/threonine kinase 3 |
| MDM4 | MDM4, p53 regulator |
| MISP | mitotic spindle positioning |
| MYBL1 | v-myb avian myeloblastosis viral oncogene homolog-like 1 |
| NARFL | nuclear prelamin A recognition factor-like |
| NEAT1 | nuclear paraspeckle assembly transcript 1 (non-protein coding) |
| NMU | neuromedin U |
| NPY5R | neuropeptide Y receptor Y5 |
| PAQR4 | progestin and adipoQ receptor family member IV |
| PCNXL4 | pecanex-like 4 (Drosophila) |
| PGP | phosphoglycolate phosphatase |
| PKIA | protein kinase (cAMP-dependent, catalytic) inhibitor alpha |
| PLA2G15 | phospholipase A2, group XV |
| PMEPA1 | prostate transmembrane protein, androgen induced 1 |
| PMP22 | peripheral myelin protein 22 |
| POMT1 | protein-O-mannosyltransferase 1 |
| PPP1R3C | protein phosphatase 1, regulatory subunit 3C |
| PROCR | protein C receptor, endothelial |
| PSKH1 | protein serine kinase H1 |
| PTPRG | protein tyrosine phosphatase, receptor type, G |
| RAB32 | RAB32, member RAS oncogene family |
| RABL6 | RAB, member RAS oncogene family-like 6 |
| RECQL4 | RecQ protein-like 4 |
| RHOB | ras homolog family member B |
| RPH3AL | rabphilin 3A-like (without C2 domains) |
| S100A4 | S100 calcium binding protein A4 |
| SLC27A6 | solute carrier family 27 (fatty acid transporter), member 6 |
| SLC2A6 | solute carrier family 2 (facilitated glucose transporter), member 6 |
| SLC38A10 | solute carrier family 38, member 10 |
| SLC41A3 | solute carrier family 41, member 3 |
| SMA4 | glucuronidase, beta pseudogene |
| SMAD7 | SMAD family member 7 |
| SMG1 | SMG1 phosphatidylinositol 3-kinase-related kinase |
| SMTN | smoothelin |
| SPHK1 | sphingosine kinase 1 |
| SPIDR | scaffolding protein involved in DNA repair |
| ST6GALNAC2 | ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 |
| STARD5 | StAR-related lipid transfer (START) domain containing 5 |
| STBD1 | starch binding domain 1 |
| SYCP2 | synaptonemal complex protein 2 |
| SYT17 | synaptotagmin XVII |
| TM7SF3 | transmembrane 7 superfamily member 3 |
| TPST2 | tyrosylprotein sulfotransferase 2 |
| TRAF5 | TNF receptor-associated factor 5 |
| TRPC4AP | transient receptor potential cation channel, subfamily C, member 4 associated protein |
| TULP4 | tubby like protein 4 |
| UAP1L1 | UDP-N-acetylglucosamine pyrophosphorylase 1 like 1 |
| ULBP2 | UL16 binding protein 2 |
| USP36 | ubiquitin specific peptidase 36 |
| USP6 | ubiquitin specific peptidase 6 |
| XK | X-linked Kx blood group |
| ZC3H12A | zinc finger CCCH-type containing 12A |
| ZFP30 | ZFP30 zinc finger protein |
| ZNF280D | zinc finger protein 280D |
