| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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198 genes differentially expressed following the trichostatin A-1072 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| AAMDC | adipogenesis associated, Mth938 domain containing |
| ACSBG1 | acyl-CoA synthetase bubblegum family member 1 |
| ADD3 | adducin 3 (gamma) |
| AHNAK2 | AHNAK nucleoprotein 2 |
| ALAS1 | 5'-aminolevulinate synthase 1 |
| ALDOC | aldolase C, fructose-bisphosphate |
| ATF3 | activating transcription factor 3 |
| BCL6 | B-cell CLL/lymphoma 6 |
| BNIP3L | BCL2/adenovirus E1B 19kDa interacting protein 3-like |
| C2ORF44 | chromosome 2 open reading frame 44 |
| CALCOCO1 | calcium binding and coiled-coil domain 1 |
| CBFA2T2 | core-binding factor, runt domain, alpha subunit 2; translocated to, 2 |
| CCDC28A | coiled-coil domain containing 28A |
| CDKN2D | cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) |
| CHKA | choline kinase alpha |
| CHST12 | carbohydrate (chondroitin 4) sulfotransferase 12 |
| CORO1A | coronin, actin binding protein, 1A |
| CPM | carboxypeptidase M |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CSRP2 | cysteine and glycine-rich protein 2 |
| CXADR | coxsackie virus and adenovirus receptor |
| CYLD | cylindromatosis (turban tumor syndrome) |
| DEGS1 | delta(4)-desaturase, sphingolipid 1 |
| DHRS2 | dehydrogenase/reductase (SDR family) member 2 |
| DNAJB4 | DnaJ (Hsp40) homolog, subfamily B, member 4 |
| DNAJC12 | DnaJ (Hsp40) homolog, subfamily C, member 12 |
| DNAJC6 | DnaJ (Hsp40) homolog, subfamily C, member 6 |
| DPYSL4 | dihydropyrimidinase-like 4 |
| EAF2 | ELL associated factor 2 |
| EFNA3 | ephrin-A3 |
| EHD1 | EH-domain containing 1 |
| ELOVL4 | ELOVL fatty acid elongase 4 |
| FSCN1 | fascin actin-bundling protein 1 |
| FYN | FYN proto-oncogene, Src family tyrosine kinase |
| GCHFR | GTP cyclohydrolase I feedback regulator |
| GEM | GTP binding protein overexpressed in skeletal muscle |
| GLRX | glutaredoxin (thioltransferase) |
| GLS | glutaminase |
| GTF2B | general transcription factor IIB |
| HEY1 | hes-related family bHLH transcription factor with YRPW motif 1 |
| HSPA2 | heat shock 70kDa protein 2 |
| INSIG1 | insulin induced gene 1 |
| ISG15 | ISG15 ubiquitin-like modifier |
| KIAA0513 | KIAA0513 |
| KLHL26 | kelch-like family member 26 |
| LIMA1 | LIM domain and actin binding 1 |
| LMCD1 | LIM and cysteine-rich domains 1 |
| MAP1B | microtubule-associated protein 1B |
| MAPRE2 | microtubule-associated protein, RP/EB family, member 2 |
| MLF1 | myeloid leukemia factor 1 |
| MMD | monocyte to macrophage differentiation-associated |
| MT1F | metallothionein 1F |
| MXI1 | MAX interactor 1, dimerization protein |
| NEDD9 | neural precursor cell expressed, developmentally down-regulated 9 |
| NEK1 | NIMA-related kinase 1 |
| NEU1 | sialidase 1 (lysosomal sialidase) |
| NME7 | NME/NM23 family member 7 |
| NPC1 | Niemann-Pick disease, type C1 |
| NPL | N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase) |
| OASL | 2'-5'-oligoadenylate synthetase-like |
| OPTN | optineurin |
| PARP16 | poly (ADP-ribose) polymerase family, member 16 |
| PCDH9 | protocadherin 9 |
| PCYOX1L | prenylcysteine oxidase 1 like |
| PPARD | peroxisome proliferator-activated receptor delta |
| PRPH | peripherin |
| RAB40B | RAB40B, member RAS oncogene family |
| RAB8B | RAB8B, member RAS oncogene family |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS2 | regulator of G-protein signaling 2 |
| RIPK4 | receptor-interacting serine-threonine kinase 4 |
| RPS6KA5 | ribosomal protein S6 kinase, 90kDa, polypeptide 5 |
| RTN2 | reticulon 2 |
| SAT1 | spermidine/spermine N1-acetyltransferase 1 |
| SERPINB9 | serpin peptidase inhibitor, clade B (ovalbumin), member 9 |
| SGK1 | serum/glucocorticoid regulated kinase 1 |
| SH3BGR | SH3 domain binding glutamate-rich protein |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SIRT4 | sirtuin 4 |
| SLC17A5 | solute carrier family 17 (acidic sugar transporter), member 5 |
| SNN | stannin |
| SSBP2 | single-stranded DNA binding protein 2 |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STARD5 | StAR-related lipid transfer (START) domain containing 5 |
| STK17A | serine/threonine kinase 17a |
| SYT11 | synaptotagmin XI |
| TAOK3 | TAO kinase 3 |
| TNFAIP8 | tumor necrosis factor, alpha-induced protein 8 |
| TRIM52 | tripartite motif containing 52 |
| TSPAN5 | tetraspanin 5 |
| TUBA4A | tubulin, alpha 4a |
| TUFT1 | tuftelin 1 |
| TXNIP | thioredoxin interacting protein |
| ULBP2 | UL16 binding protein 2 |
| WDR19 | WD repeat domain 19 |
| WDR47 | WD repeat domain 47 |
| WIPI1 | WD repeat domain, phosphoinositide interacting 1 |
| ZDHHC11 | zinc finger, DHHC-type containing 11 |
| Symbol | Name |
|---|---|
| ACKR3 | atypical chemokine receptor 3 |
| ADNP | activity-dependent neuroprotector homeobox |
| AMIGO2 | adhesion molecule with Ig-like domain 2 |
| AMOTL2 | angiomotin like 2 |
| AP5S1 | adaptor-related protein complex 5, sigma 1 subunit |
| ATF1 | activating transcription factor 1 |
| BANP | BTG3 associated nuclear protein |
| BATF | basic leucine zipper transcription factor, ATF-like |
| BCAR3 | breast cancer anti-estrogen resistance 3 |
| BRINP3 | bone morphogenetic protein/retinoic acid inducible neural-specific 3 |
| CBFA2T3 | core-binding factor, runt domain, alpha subunit 2; translocated to, 3 |
| CBR3 | carbonyl reductase 3 |
| CCND1 | cyclin D1 |
| CCNJ | cyclin J |
| CDKN1B | cyclin-dependent kinase inhibitor 1B (p27, Kip1) |
| COIL | coilin |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| CUL1 | cullin 1 |
| DENND4B | DENN/MADD domain containing 4B |
| DEPDC1 | DEP domain containing 1 |
| DKK1 | dickkopf WNT signaling pathway inhibitor 1 |
| E2F8 | E2F transcription factor 8 |
| EFNA1 | ephrin-A1 |
| EGR3 | early growth response 3 |
| ERBB2IP | erbb2 interacting protein |
| FAM57A | family with sequence similarity 57, member A |
| FAM60A | family with sequence similarity 60, member A |
| FJX1 | four jointed box 1 (Drosophila) |
| FOXA1 | forkhead box A1 |
| FOXC1 | forkhead box C1 |
| GABPB1 | GA binding protein transcription factor, beta subunit 1 |
| GATA3 | GATA binding protein 3 |
| GMEB2 | glucocorticoid modulatory element binding protein 2 |
| GTF2I | general transcription factor IIi |
| GTF2IRD1 | GTF2I repeat domain containing 1 |
| INHBB | inhibin, beta B |
| IRS1 | insulin receptor substrate 1 |
| IRX5 | iroquois homeobox 5 |
| KEAP1 | kelch-like ECH-associated protein 1 |
| KIAA0753 | KIAA0753 |
| KIF15 | kinesin family member 15 |
| LMNB1 | lamin B1 |
| LRP8 | low density lipoprotein receptor-related protein 8, apolipoprotein e receptor |
| LTBR | lymphotoxin beta receptor (TNFR superfamily, member 3) |
| LUC7L2 | LUC7-like 2 (S. cerevisiae) |
| MCM9 | minichromosome maintenance complex component 9 |
| MEPCE | methylphosphate capping enzyme |
| MEX3C | mex-3 RNA binding family member C |
| MSL1 | male-specific lethal 1 homolog (Drosophila) |
| MYC | v-myc avian myelocytomatosis viral oncogene homolog |
| MYD88 | myeloid differentiation primary response 88 |
| NACC2 | NACC family member 2, BEN and BTB (POZ) domain containing |
| NCOA6 | nuclear receptor coactivator 6 |
| NPY1R | neuropeptide Y receptor Y1 |
| NRIP1 | nuclear receptor interacting protein 1 |
| NUAK1 | NUAK family, SNF1-like kinase, 1 |
| NUP62 | nucleoporin 62kDa |
| PAPD7 | PAP associated domain containing 7 |
| POGK | pogo transposable element with KRAB domain |
| PPAN | peter pan homolog (Drosophila) |
| PPRC1 | peroxisome proliferator-activated receptor gamma, coactivator-related 1 |
| PRR15L | proline rich 15-like |
| RASGRP1 | RAS guanyl releasing protein 1 (calcium and DAG-regulated) |
| RBM23 | RNA binding motif protein 23 |
| RBM39 | RNA binding motif protein 39 |
| RPRD2 | regulation of nuclear pre-mRNA domain containing 2 |
| SCAF8 | SR-related CTD-associated factor 8 |
| SETD1B | SET domain containing 1B |
| SLC35F2 | solute carrier family 35, member F2 |
| SMAD7 | SMAD family member 7 |
| SMARCB1 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 |
| SPIN1 | spindlin 1 |
| SREK1 | splicing regulatory glutamine/lysine-rich protein 1 |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| ST3GAL1 | ST3 beta-galactoside alpha-2,3-sialyltransferase 1 |
| STC2 | stanniocalcin 2 |
| TGIF1 | TGFB-induced factor homeobox 1 |
| TMEM223 | transmembrane protein 223 |
| TMEM30B | transmembrane protein 30B |
| TNS3 | tensin 3 |
| TRIB3 | tribbles pseudokinase 3 |
| TRIM16 | tripartite motif containing 16 |
| TRIM8 | tripartite motif containing 8 |
| TRPS1 | trichorhinophalangeal syndrome I |
| TSKU | tsukushi, small leucine rich proteoglycan |
| UNKL | unkempt family zinc finger-like |
| WDR43 | WD repeat domain 43 |
| WDR74 | WD repeat domain 74 |
| XBP1 | X-box binding protein 1 |
| YARS2 | tyrosyl-tRNA synthetase 2, mitochondrial |
| ZBED5 | zinc finger, BED-type containing 5 |
| ZC3H4 | zinc finger CCCH-type containing 4 |
| ZFHX3 | zinc finger homeobox 3 |
| ZHX2 | zinc fingers and homeoboxes 2 |
| ZIC1 | Zic family member 1 |
| ZMIZ1 | zinc finger, MIZ-type containing 1 |
| ZNF33B | zinc finger protein 33B |
| ZNF562 | zinc finger protein 562 |
| ZNF692 | zinc finger protein 692 |
| ZZZ3 | zinc finger, ZZ-type containing 3 |
