| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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199 genes differentially expressed following the trichostatin A-1112 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| AAMDC | adipogenesis associated, Mth938 domain containing |
| ADD3 | adducin 3 (gamma) |
| AHNAK2 | AHNAK nucleoprotein 2 |
| AKAP12 | A kinase (PRKA) anchor protein 12 |
| ALDOC | aldolase C, fructose-bisphosphate |
| ARL4C | ADP-ribosylation factor-like 4C |
| ARNTL | aryl hydrocarbon receptor nuclear translocator-like |
| BACE1 | beta-site APP-cleaving enzyme 1 |
| BNIP3L | BCL2/adenovirus E1B 19kDa interacting protein 3-like |
| C14ORF132 | chromosome 14 open reading frame 132 |
| CALCOCO1 | calcium binding and coiled-coil domain 1 |
| CBFA2T2 | core-binding factor, runt domain, alpha subunit 2; translocated to, 2 |
| CCDC28A | coiled-coil domain containing 28A |
| CHKA | choline kinase alpha |
| CHST12 | carbohydrate (chondroitin 4) sulfotransferase 12 |
| CNNM4 | cyclin and CBS domain divalent metal cation transport mediator 4 |
| CORO1A | coronin, actin binding protein, 1A |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CSRP2 | cysteine and glycine-rich protein 2 |
| DEGS1 | delta(4)-desaturase, sphingolipid 1 |
| DHRS2 | dehydrogenase/reductase (SDR family) member 2 |
| DNAJB4 | DnaJ (Hsp40) homolog, subfamily B, member 4 |
| DNAJC12 | DnaJ (Hsp40) homolog, subfamily C, member 12 |
| DNAJC6 | DnaJ (Hsp40) homolog, subfamily C, member 6 |
| DNMT3B | DNA (cytosine-5-)-methyltransferase 3 beta |
| EAF2 | ELL associated factor 2 |
| EFNB3 | ephrin-B3 |
| ELOVL4 | ELOVL fatty acid elongase 4 |
| EPHB3 | EPH receptor B3 |
| ETHE1 | ethylmalonic encephalopathy 1 |
| EXT1 | exostosin glycosyltransferase 1 |
| EXTL2 | exostosin-like glycosyltransferase 2 |
| FA2H | fatty acid 2-hydroxylase |
| FN1 | fibronectin 1 |
| FYN | FYN proto-oncogene, Src family tyrosine kinase |
| GCHFR | GTP cyclohydrolase I feedback regulator |
| GEM | GTP binding protein overexpressed in skeletal muscle |
| GLRX | glutaredoxin (thioltransferase) |
| GLS | glutaminase |
| GTF2B | general transcription factor IIB |
| HEY1 | hes-related family bHLH transcription factor with YRPW motif 1 |
| HSPA2 | heat shock 70kDa protein 2 |
| HSPB11 | heat shock protein family B (small), member 11 |
| IRF7 | interferon regulatory factor 7 |
| ISG15 | ISG15 ubiquitin-like modifier |
| KDM4B | lysine (K)-specific demethylase 4B |
| KIAA0513 | KIAA0513 |
| KIF5C | kinesin family member 5C |
| KLHDC10 | kelch domain containing 10 |
| KLHL24 | kelch-like family member 24 |
| LIMA1 | LIM domain and actin binding 1 |
| MAPRE2 | microtubule-associated protein, RP/EB family, member 2 |
| MBNL2 | muscleblind-like splicing regulator 2 |
| MLXIP | MLX interacting protein |
| MMD | monocyte to macrophage differentiation-associated |
| MOSPD2 | motile sperm domain containing 2 |
| MT2A | metallothionein 2A |
| MXI1 | MAX interactor 1, dimerization protein |
| NEK1 | NIMA-related kinase 1 |
| NEU1 | sialidase 1 (lysosomal sialidase) |
| NME7 | NME/NM23 family member 7 |
| NPC1 | Niemann-Pick disease, type C1 |
| OPTN | optineurin |
| PKIA | protein kinase (cAMP-dependent, catalytic) inhibitor alpha |
| PPARD | peroxisome proliferator-activated receptor delta |
| PPM1E | protein phosphatase, Mg2+/Mn2+ dependent, 1E |
| PRPH | peripherin |
| RAB29 | RAB29, member RAS oncogene family |
| RAB40B | RAB40B, member RAS oncogene family |
| RAB8B | RAB8B, member RAS oncogene family |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RIMS3 | regulating synaptic membrane exocytosis 3 |
| RIPK4 | receptor-interacting serine-threonine kinase 4 |
| RPS6KA5 | ribosomal protein S6 kinase, 90kDa, polypeptide 5 |
| SAT1 | spermidine/spermine N1-acetyltransferase 1 |
| SCML1 | sex comb on midleg-like 1 (Drosophila) |
| SERPINB9 | serpin peptidase inhibitor, clade B (ovalbumin), member 9 |
| SFXN3 | sideroflexin 3 |
| SH3BGR | SH3 domain binding glutamate-rich protein |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SIKE1 | suppressor of IKBKE 1 |
| SLC31A2 | solute carrier family 31 (copper transporter), member 2 |
| SNN | stannin |
| SREBF1 | sterol regulatory element binding transcription factor 1 |
| SSBP2 | single-stranded DNA binding protein 2 |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STK17A | serine/threonine kinase 17a |
| STX2 | syntaxin 2 |
| STXBP1 | syntaxin binding protein 1 |
| SWAP70 | SWAP switching B-cell complex 70kDa subunit |
| TAOK3 | TAO kinase 3 |
| TRIM2 | tripartite motif containing 2 |
| TUBA4A | tubulin, alpha 4a |
| TUFT1 | tuftelin 1 |
| TXNIP | thioredoxin interacting protein |
| VCL | vinculin |
| WDR19 | WD repeat domain 19 |
| WDR47 | WD repeat domain 47 |
| WIPI1 | WD repeat domain, phosphoinositide interacting 1 |
| Symbol | Name |
|---|---|
| ACKR3 | atypical chemokine receptor 3 |
| ADNP | activity-dependent neuroprotector homeobox |
| AMIGO2 | adhesion molecule with Ig-like domain 2 |
| AP5S1 | adaptor-related protein complex 5, sigma 1 subunit |
| ARAF | A-Raf proto-oncogene, serine/threonine kinase |
| ATF1 | activating transcription factor 1 |
| B3GALNT1 | beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) |
| BANP | BTG3 associated nuclear protein |
| BATF | basic leucine zipper transcription factor, ATF-like |
| BRINP3 | bone morphogenetic protein/retinoic acid inducible neural-specific 3 |
| C7ORF49 | chromosome 7 open reading frame 49 |
| C9ORF3 | chromosome 9 open reading frame 3 |
| CBFA2T3 | core-binding factor, runt domain, alpha subunit 2; translocated to, 3 |
| CCND1 | cyclin D1 |
| CDKN1B | cyclin-dependent kinase inhibitor 1B (p27, Kip1) |
| COA7 | cytochrome c oxidase assembly factor 7 (putative) |
| COIL | coilin |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| CTPS1 | CTP synthase 1 |
| CUL1 | cullin 1 |
| CXCL12 | chemokine (C-X-C motif) ligand 12 |
| DENND4B | DENN/MADD domain containing 4B |
| DKK1 | dickkopf WNT signaling pathway inhibitor 1 |
| DTWD1 | DTW domain containing 1 |
| EGR3 | early growth response 3 |
| ERBB2IP | erbb2 interacting protein |
| ERF | Ets2 repressor factor |
| FAM57A | family with sequence similarity 57, member A |
| FJX1 | four jointed box 1 (Drosophila) |
| FOXA1 | forkhead box A1 |
| GABPB1 | GA binding protein transcription factor, beta subunit 1 |
| GATA3 | GATA binding protein 3 |
| GTF2I | general transcription factor IIi |
| GTF2IRD1 | GTF2I repeat domain containing 1 |
| HIRIP3 | HIRA interacting protein 3 |
| INHBB | inhibin, beta B |
| INPPL1 | inositol polyphosphate phosphatase-like 1 |
| IRS1 | insulin receptor substrate 1 |
| IRX5 | iroquois homeobox 5 |
| KEAP1 | kelch-like ECH-associated protein 1 |
| LANCL2 | LanC lantibiotic synthetase component C-like 2 (bacterial) |
| LMNB1 | lamin B1 |
| LRP8 | low density lipoprotein receptor-related protein 8, apolipoprotein e receptor |
| LTBR | lymphotoxin beta receptor (TNFR superfamily, member 3) |
| MCRS1 | microspherule protein 1 |
| MEPCE | methylphosphate capping enzyme |
| MEX3C | mex-3 RNA binding family member C |
| MSL1 | male-specific lethal 1 homolog (Drosophila) |
| MYC | v-myc avian myelocytomatosis viral oncogene homolog |
| NCOA6 | nuclear receptor coactivator 6 |
| NETO2 | neuropilin (NRP) and tolloid (TLL)-like 2 |
| NFKB1 | nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 |
| NRIP1 | nuclear receptor interacting protein 1 |
| NUAK1 | NUAK family, SNF1-like kinase, 1 |
| NUP62 | nucleoporin 62kDa |
| PAPD7 | PAP associated domain containing 7 |
| POGK | pogo transposable element with KRAB domain |
| POLR3E | polymerase (RNA) III (DNA directed) polypeptide E (80kD) |
| PPAN | peter pan homolog (Drosophila) |
| PPRC1 | peroxisome proliferator-activated receptor gamma, coactivator-related 1 |
| PRR15L | proline rich 15-like |
| PUS1 | pseudouridylate synthase 1 |
| QRICH1 | glutamine-rich 1 |
| RASGRP1 | RAS guanyl releasing protein 1 (calcium and DAG-regulated) |
| RBM23 | RNA binding motif protein 23 |
| RBM39 | RNA binding motif protein 39 |
| RBM4B | RNA binding motif protein 4B |
| RNF44 | ring finger protein 44 |
| RPRD2 | regulation of nuclear pre-mRNA domain containing 2 |
| SCAF8 | SR-related CTD-associated factor 8 |
| SMARCB1 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 |
| SPIN1 | spindlin 1 |
| SREK1 | splicing regulatory glutamine/lysine-rich protein 1 |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| STC2 | stanniocalcin 2 |
| SUV420H1 | suppressor of variegation 4-20 homolog 1 (Drosophila) |
| TBL1XR1 | transducin (beta)-like 1 X-linked receptor 1 |
| TCERG1 | transcription elongation regulator 1 |
| TMEM30B | transmembrane protein 30B |
| TOE1 | target of EGR1, member 1 (nuclear) |
| TOR3A | torsin family 3, member A |
| TRIB3 | tribbles pseudokinase 3 |
| TRIM16 | tripartite motif containing 16 |
| TRIM8 | tripartite motif containing 8 |
| TRPS1 | trichorhinophalangeal syndrome I |
| TSEN2 | TSEN2 tRNA splicing endonuclease subunit |
| TSKU | tsukushi, small leucine rich proteoglycan |
| UBXN8 | UBX domain protein 8 |
| UNKL | unkempt family zinc finger-like |
| USP21 | ubiquitin specific peptidase 21 |
| VRK2 | vaccinia related kinase 2 |
| WDR6 | WD repeat domain 6 |
| XBP1 | X-box binding protein 1 |
| YAP1 | Yes-associated protein 1 |
| ZBED5 | zinc finger, BED-type containing 5 |
| ZC3H4 | zinc finger CCCH-type containing 4 |
| ZFHX3 | zinc finger homeobox 3 |
| ZHX2 | zinc fingers and homeoboxes 2 |
| ZIC1 | Zic family member 1 |
| ZZZ3 | zinc finger, ZZ-type containing 3 |
