| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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199 genes differentially expressed following the trichostatin A-1234 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABAT | 4-aminobutyrate aminotransferase |
| ABCG1 | ATP-binding cassette, sub-family G (WHITE), member 1 |
| ABHD17B | abhydrolase domain containing 17B |
| ABTB2 | ankyrin repeat and BTB (POZ) domain containing 2 |
| ADRB2 | adrenoceptor beta 2, surface |
| AHR | aryl hydrocarbon receptor |
| ANGPTL4 | angiopoietin-like 4 |
| AQP3 | aquaporin 3 (Gill blood group) |
| ARNTL | aryl hydrocarbon receptor nuclear translocator-like |
| ASMTL | acetylserotonin O-methyltransferase-like |
| BAIAP2 | BAI1-associated protein 2 |
| BAMBI | BMP and activin membrane-bound inhibitor |
| BCL6 | B-cell CLL/lymphoma 6 |
| C2CD2L | C2CD2-like |
| CCL20 | chemokine (C-C motif) ligand 20 |
| CDC42EP3 | CDC42 effector protein (Rho GTPase binding) 3 |
| CDKN1A | cyclin-dependent kinase inhibitor 1A (p21, Cip1) |
| CEP76 | centrosomal protein 76kDa |
| CFAP69 | cilia and flagella associated protein 69 |
| CHN2 | chimerin 2 |
| CPM | carboxypeptidase M |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CTGF | connective tissue growth factor |
| CTH | cystathionine gamma-lyase |
| CTNS | cystinosin, lysosomal cystine transporter |
| CXCR4 | chemokine (C-X-C motif) receptor 4 |
| CYR61 | cysteine-rich, angiogenic inducer, 61 |
| DENND3 | DENN/MADD domain containing 3 |
| DHRS2 | dehydrogenase/reductase (SDR family) member 2 |
| DNAJB1 | DnaJ (Hsp40) homolog, subfamily B, member 1 |
| DNAJC6 | DnaJ (Hsp40) homolog, subfamily C, member 6 |
| DNMT3B | DNA (cytosine-5-)-methyltransferase 3 beta |
| DUSP1 | dual specificity phosphatase 1 |
| DUSP10 | dual specificity phosphatase 10 |
| DUSP5 | dual specificity phosphatase 5 |
| DYRK3 | dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 |
| EFNB2 | ephrin-B2 |
| EGR2 | early growth response 2 |
| ELF3 | E74-like factor 3 (ets domain transcription factor, epithelial-specific ) |
| ELOVL4 | ELOVL fatty acid elongase 4 |
| EPHB3 | EPH receptor B3 |
| EPPK1 | epiplakin 1 |
| FABP4 | fatty acid binding protein 4, adipocyte |
| FAM134B | family with sequence similarity 134, member B |
| FLRT3 | fibronectin leucine rich transmembrane protein 3 |
| GLRX | glutaredoxin (thioltransferase) |
| GNA11 | guanine nucleotide binding protein (G protein), alpha 11 (Gq class) |
| GPRC5A | G protein-coupled receptor, class C, group 5, member A |
| GTF2B | general transcription factor IIB |
| H1FX | H1 histone family, member X |
| HERPUD1 | homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 |
| HMGCS1 | 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) |
| HSPA2 | heat shock 70kDa protein 2 |
| ID2 | inhibitor of DNA binding 2, dominant negative helix-loop-helix protein |
| ID4 | inhibitor of DNA binding 4, dominant negative helix-loop-helix protein |
| IL1RAP | interleukin 1 receptor accessory protein |
| INSIG1 | insulin induced gene 1 |
| IRF6 | interferon regulatory factor 6 |
| IRS2 | insulin receptor substrate 2 |
| LINC00312 | long intergenic non-protein coding RNA 312 |
| LINC00341 | long intergenic non-protein coding RNA 341 |
| LMCD1 | LIM and cysteine-rich domains 1 |
| LPIN1 | lipin 1 |
| LPPR4 | lipid phosphate phosphatase-related protein type 4 |
| MAP2K3 | mitogen-activated protein kinase kinase 3 |
| MERTK | MER proto-oncogene, tyrosine kinase |
| MICA | MHC class I polypeptide-related sequence A |
| MMP1 | matrix metallopeptidase 1 |
| NEAT1 | nuclear paraspeckle assembly transcript 1 (non-protein coding) |
| NEDD4L | neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase |
| NEDD9 | neural precursor cell expressed, developmentally down-regulated 9 |
| NFIL3 | nuclear factor, interleukin 3 regulated |
| NR4A2 | nuclear receptor subfamily 4, group A, member 2 |
| OASL | 2'-5'-oligoadenylate synthetase-like |
| PCDH9 | protocadherin 9 |
| PDGFRA | platelet-derived growth factor receptor, alpha polypeptide |
| PKP2 | plakophilin 2 |
| PLK2 | polo-like kinase 2 |
| PMAIP1 | phorbol-12-myristate-13-acetate-induced protein 1 |
| PRKAR2B | protein kinase, cAMP-dependent, regulatory, type II, beta |
| PTGER4 | prostaglandin E receptor 4 (subtype EP4) |
| RAB11FIP1 | RAB11 family interacting protein 1 (class I) |
| RAI2 | retinoic acid induced 2 |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS4 | regulator of G-protein signaling 4 |
| RHOB | ras homolog family member B |
| RND1 | Rho family GTPase 1 |
| RNF19B | ring finger protein 19B |
| RNF24 | ring finger protein 24 |
| SAT1 | spermidine/spermine N1-acetyltransferase 1 |
| SLC30A1 | solute carrier family 30 (zinc transporter), member 1 |
| SQLE | squalene epoxidase |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STC1 | stanniocalcin 1 |
| STK17B | serine/threonine kinase 17b |
| TBPL1 | TBP-like 1 |
| TUBB2B | tubulin, beta 2B class IIb |
| TUFT1 | tuftelin 1 |
| WDR19 | WD repeat domain 19 |
| ZNF217 | zinc finger protein 217 |
| Symbol | Name |
|---|---|
| ACTR8 | ARP8 actin-related protein 8 homolog (yeast) |
| ADNP | activity-dependent neuroprotector homeobox |
| ARSJ | arylsulfatase family, member J |
| ATF1 | activating transcription factor 1 |
| BANP | BTG3 associated nuclear protein |
| BCAR3 | breast cancer anti-estrogen resistance 3 |
| BCL7A | B-cell CLL/lymphoma 7A |
| BOLA1 | bolA family member 1 |
| C19ORF40 | chromosome 19 open reading frame 40 |
| C19ORF54 | chromosome 19 open reading frame 54 |
| CARD8 | caspase recruitment domain family, member 8 |
| CASD1 | CAS1 domain containing 1 |
| CBR3 | carbonyl reductase 3 |
| CCDC51 | coiled-coil domain containing 51 |
| CDC7 | cell division cycle 7 |
| CLCF1 | cardiotrophin-like cytokine factor 1 |
| COA7 | cytochrome c oxidase assembly factor 7 (putative) |
| COIL | coilin |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| CUL1 | cullin 1 |
| DEPDC1 | DEP domain containing 1 |
| DFFB | DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase) |
| DTWD1 | DTW domain containing 1 |
| FAM111A | family with sequence similarity 111, member A |
| FAM57A | family with sequence similarity 57, member A |
| FOSL1 | FOS-like antigen 1 |
| FOXA1 | forkhead box A1 |
| FST | follistatin |
| GBX2 | gastrulation brain homeobox 2 |
| GTF2I | general transcription factor IIi |
| HAS2 | hyaluronan synthase 2 |
| HMGA2 | high mobility group AT-hook 2 |
| HMGXB4 | HMG box domain containing 4 |
| IFIT2 | interferon-induced protein with tetratricopeptide repeats 2 |
| IL7R | interleukin 7 receptor |
| INHBB | inhibin, beta B |
| IRF9 | interferon regulatory factor 9 |
| KAT6B | K(lysine) acetyltransferase 6B |
| KBTBD2 | kelch repeat and BTB (POZ) domain containing 2 |
| KBTBD4 | kelch repeat and BTB (POZ) domain containing 4 |
| KEAP1 | kelch-like ECH-associated protein 1 |
| LIF | leukemia inhibitory factor |
| LMNB1 | lamin B1 |
| LPAR1 | lysophosphatidic acid receptor 1 |
| LRIF1 | ligand dependent nuclear receptor interacting factor 1 |
| LRRC41 | leucine rich repeat containing 41 |
| MEPCE | methylphosphate capping enzyme |
| METTL4 | methyltransferase like 4 |
| METTL8 | methyltransferase like 8 |
| NHEJ1 | nonhomologous end-joining factor 1 |
| NMI | N-myc (and STAT) interactor |
| NPM3 | nucleophosmin/nucleoplasmin 3 |
| NRIP1 | nuclear receptor interacting protein 1 |
| NSD1 | nuclear receptor binding SET domain protein 1 |
| NUPR1 | nuclear protein, transcriptional regulator, 1 |
| P3H4 | prolyl 3-hydroxylase family member 4 (non-enzymatic) |
| PAGR1 | PAXIP1 associated glutamate-rich protein 1 |
| PARP2 | poly (ADP-ribose) polymerase 2 |
| PEX14 | peroxisomal biogenesis factor 14 |
| PGGT1B | protein geranylgeranyltransferase type I, beta subunit |
| PLEKHA2 | pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 |
| PLK1 | polo-like kinase 1 |
| PPAP2B | phosphatidic acid phosphatase type 2B |
| PPRC1 | peroxisome proliferator-activated receptor gamma, coactivator-related 1 |
| PTPN9 | protein tyrosine phosphatase, non-receptor type 9 |
| QRICH1 | glutamine-rich 1 |
| RBM23 | RNA binding motif protein 23 |
| RIN2 | Ras and Rab interactor 2 |
| RNF146 | ring finger protein 146 |
| RPP38 | ribonuclease P/MRP 38kDa subunit |
| SCAF8 | SR-related CTD-associated factor 8 |
| SCO2 | SCO2 cytochrome c oxidase assembly protein |
| SERPINH1 | serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) |
| SETD1B | SET domain containing 1B |
| SFMBT1 | Scm-like with four mbt domains 1 |
| SLC29A3 | solute carrier family 29 (equilibrative nucleoside transporter), member 3 |
| SMAGP | small cell adhesion glycoprotein |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| SUV39H1 | suppressor of variegation 3-9 homolog 1 (Drosophila) |
| SUV420H1 | suppressor of variegation 4-20 homolog 1 (Drosophila) |
| SYNPO | synaptopodin |
| TACO1 | translational activator of mitochondrially encoded cytochrome c oxidase I |
| TAF15 | TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa |
| TGFB1I1 | transforming growth factor beta 1 induced transcript 1 |
| TMC5 | transmembrane channel-like 5 |
| TMEM168 | transmembrane protein 168 |
| TRIB3 | tribbles pseudokinase 3 |
| TRPM2 | transient receptor potential cation channel, subfamily M, member 2 |
| USP21 | ubiquitin specific peptidase 21 |
| VEGFC | vascular endothelial growth factor C |
| XBP1 | X-box binding protein 1 |
| ZBTB3 | zinc finger and BTB domain containing 3 |
| ZC3H4 | zinc finger CCCH-type containing 4 |
| ZC3H7A | zinc finger CCCH-type containing 7A |
| ZCCHC10 | zinc finger, CCHC domain containing 10 |
| ZNF16 | zinc finger protein 16 |
| ZNF165 | zinc finger protein 165 |
| ZNF32 | zinc finger protein 32 |
| ZNF532 | zinc finger protein 532 |
