| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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200 genes differentially expressed following the trichostatin A-1672 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| AAMDC | adipogenesis associated, Mth938 domain containing |
| ABCB9 | ATP-binding cassette, sub-family B (MDR/TAP), member 9 |
| ACSBG1 | acyl-CoA synthetase bubblegum family member 1 |
| ADD3 | adducin 3 (gamma) |
| ADM | adrenomedullin |
| AHNAK2 | AHNAK nucleoprotein 2 |
| ALDOC | aldolase C, fructose-bisphosphate |
| ARMCX2 | armadillo repeat containing, X-linked 2 |
| ASAP3 | ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 |
| CCDC28A | coiled-coil domain containing 28A |
| CDKN2D | cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) |
| CEP112 | centrosomal protein 112kDa |
| CLGN | calmegin |
| CORO1A | coronin, actin binding protein, 1A |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CSRP2 | cysteine and glycine-rich protein 2 |
| CXADR | coxsackie virus and adenovirus receptor |
| CYLD | cylindromatosis (turban tumor syndrome) |
| CYP46A1 | cytochrome P450, family 46, subfamily A, polypeptide 1 |
| DEGS1 | delta(4)-desaturase, sphingolipid 1 |
| DHRS2 | dehydrogenase/reductase (SDR family) member 2 |
| DLX2 | distal-less homeobox 2 |
| DNAJB4 | DnaJ (Hsp40) homolog, subfamily B, member 4 |
| DNAJC12 | DnaJ (Hsp40) homolog, subfamily C, member 12 |
| DNAJC6 | DnaJ (Hsp40) homolog, subfamily C, member 6 |
| DPYSL4 | dihydropyrimidinase-like 4 |
| DYRK3 | dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 |
| EFNA3 | ephrin-A3 |
| EFNB3 | ephrin-B3 |
| ELOVL4 | ELOVL fatty acid elongase 4 |
| EPOR | erythropoietin receptor |
| FKBP1B | FK506 binding protein 1B, 12.6 kDa |
| FYN | FYN proto-oncogene, Src family tyrosine kinase |
| GCHFR | GTP cyclohydrolase I feedback regulator |
| GEM | GTP binding protein overexpressed in skeletal muscle |
| GLCE | glucuronic acid epimerase |
| GLRX | glutaredoxin (thioltransferase) |
| GRK5 | G protein-coupled receptor kinase 5 |
| GSDMB | gasdermin B |
| GTF2B | general transcription factor IIB |
| HEY1 | hes-related family bHLH transcription factor with YRPW motif 1 |
| HSD17B11 | hydroxysteroid (17-beta) dehydrogenase 11 |
| INSIG1 | insulin induced gene 1 |
| KIAA0513 | KIAA0513 |
| KIF5C | kinesin family member 5C |
| LIMA1 | LIM domain and actin binding 1 |
| LYST | lysosomal trafficking regulator |
| MAP1B | microtubule-associated protein 1B |
| MAPRE2 | microtubule-associated protein, RP/EB family, member 2 |
| MARK4 | MAP/microtubule affinity-regulating kinase 4 |
| MLF1 | myeloid leukemia factor 1 |
| MMD | monocyte to macrophage differentiation-associated |
| MXI1 | MAX interactor 1, dimerization protein |
| NEK1 | NIMA-related kinase 1 |
| NPC1 | Niemann-Pick disease, type C1 |
| NXN | nucleoredoxin |
| OASL | 2'-5'-oligoadenylate synthetase-like |
| PADI3 | peptidyl arginine deiminase, type III |
| PAIP2B | poly(A) binding protein interacting protein 2B |
| PCDH9 | protocadherin 9 |
| PIK3CD | phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta |
| PLCG2 | phospholipase C, gamma 2 (phosphatidylinositol-specific) |
| PMP22 | peripheral myelin protein 22 |
| PPARD | peroxisome proliferator-activated receptor delta |
| PPM1E | protein phosphatase, Mg2+/Mn2+ dependent, 1E |
| PRPH | peripherin |
| PTCH1 | patched 1 |
| PTRF | polymerase I and transcript release factor |
| REEP1 | receptor accessory protein 1 |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS2 | regulator of G-protein signaling 2 |
| RPS6KA5 | ribosomal protein S6 kinase, 90kDa, polypeptide 5 |
| RTN2 | reticulon 2 |
| RUNDC3B | RUN domain containing 3B |
| SAT1 | spermidine/spermine N1-acetyltransferase 1 |
| SCML1 | sex comb on midleg-like 1 (Drosophila) |
| SEPP1 | selenoprotein P, plasma, 1 |
| SERPINB9 | serpin peptidase inhibitor, clade B (ovalbumin), member 9 |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SIRT4 | sirtuin 4 |
| SLC17A7 | solute carrier family 17 (vesicular glutamate transporter), member 7 |
| SSBP2 | single-stranded DNA binding protein 2 |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STARD5 | StAR-related lipid transfer (START) domain containing 5 |
| STON1 | stonin 1 |
| STXBP1 | syntaxin binding protein 1 |
| TMSB15A | thymosin beta 15a |
| TRAFD1 | TRAF-type zinc finger domain containing 1 |
| TRIM2 | tripartite motif containing 2 |
| TUBA4A | tubulin, alpha 4a |
| TUFT1 | tuftelin 1 |
| TXNIP | thioredoxin interacting protein |
| ULBP2 | UL16 binding protein 2 |
| WDR19 | WD repeat domain 19 |
| WIPI1 | WD repeat domain, phosphoinositide interacting 1 |
| ZCCHC24 | zinc finger, CCHC domain containing 24 |
| ZDHHC11 | zinc finger, DHHC-type containing 11 |
| ZNF204P | zinc finger protein 204, pseudogene |
| ZNF324 | zinc finger protein 324 |
| Symbol | Name |
|---|---|
| ACIN1 | apoptotic chromatin condensation inducer 1 |
| ACKR3 | atypical chemokine receptor 3 |
| ADNP | activity-dependent neuroprotector homeobox |
| AP5S1 | adaptor-related protein complex 5, sigma 1 subunit |
| ASPSCR1 | alveolar soft part sarcoma chromosome region, candidate 1 |
| ATAD2B | ATPase family, AAA domain containing 2B |
| AXIN1 | axin 1 |
| BRINP3 | bone morphogenetic protein/retinoic acid inducible neural-specific 3 |
| C11ORF68 | chromosome 11 open reading frame 68 |
| C9ORF91 | chromosome 9 open reading frame 91 |
| CALHM2 | calcium homeostasis modulator 2 |
| CASD1 | CAS1 domain containing 1 |
| CBFA2T3 | core-binding factor, runt domain, alpha subunit 2; translocated to, 3 |
| CCDC94 | coiled-coil domain containing 94 |
| CCND1 | cyclin D1 |
| COA7 | cytochrome c oxidase assembly factor 7 (putative) |
| COIL | coilin |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| CXCL12 | chemokine (C-X-C motif) ligand 12 |
| CYP26A1 | cytochrome P450, family 26, subfamily A, polypeptide 1 |
| DKK1 | dickkopf WNT signaling pathway inhibitor 1 |
| DNAJC22 | DnaJ (Hsp40) homolog, subfamily C, member 22 |
| EGR3 | early growth response 3 |
| EXOSC10 | exosome component 10 |
| FAM57A | family with sequence similarity 57, member A |
| FBRS | fibrosin |
| FJX1 | four jointed box 1 (Drosophila) |
| FOXA1 | forkhead box A1 |
| GABPB1 | GA binding protein transcription factor, beta subunit 1 |
| GATA3 | GATA binding protein 3 |
| GTF2I | general transcription factor IIi |
| GTF2IRD1 | GTF2I repeat domain containing 1 |
| H2AFY2 | H2A histone family, member Y2 |
| HIRIP3 | HIRA interacting protein 3 |
| HOXC11 | homeobox C11 |
| IFNGR2 | interferon gamma receptor 2 (interferon gamma transducer 1) |
| INHBB | inhibin, beta B |
| IRS1 | insulin receptor substrate 1 |
| IRX4 | iroquois homeobox 4 |
| IRX5 | iroquois homeobox 5 |
| KEAP1 | kelch-like ECH-associated protein 1 |
| KIAA0125 | KIAA0125 |
| LMNB2 | lamin B2 |
| LRFN4 | leucine rich repeat and fibronectin type III domain containing 4 |
| LRP8 | low density lipoprotein receptor-related protein 8, apolipoprotein e receptor |
| LUC7L2 | LUC7-like 2 (S. cerevisiae) |
| MCM9 | minichromosome maintenance complex component 9 |
| MEPCE | methylphosphate capping enzyme |
| METTL8 | methyltransferase like 8 |
| MSL1 | male-specific lethal 1 homolog (Drosophila) |
| MYC | v-myc avian myelocytomatosis viral oncogene homolog |
| MYD88 | myeloid differentiation primary response 88 |
| NPY1R | neuropeptide Y receptor Y1 |
| NR1H2 | nuclear receptor subfamily 1, group H, member 2 |
| NR1H3 | nuclear receptor subfamily 1, group H, member 3 |
| NRIP1 | nuclear receptor interacting protein 1 |
| NUAK1 | NUAK family, SNF1-like kinase, 1 |
| NUP62 | nucleoporin 62kDa |
| P2RY6 | pyrimidinergic receptor P2Y, G-protein coupled, 6 |
| PCNT | pericentrin |
| POGK | pogo transposable element with KRAB domain |
| PRR15L | proline rich 15-like |
| RASGRP1 | RAS guanyl releasing protein 1 (calcium and DAG-regulated) |
| RCOR3 | REST corepressor 3 |
| RGS19 | regulator of G-protein signaling 19 |
| RIPPLY3 | ripply transcriptional repressor 3 |
| SCAF8 | SR-related CTD-associated factor 8 |
| SEMA4C | sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C |
| SETD1B | SET domain containing 1B |
| SLC25A22 | solute carrier family 25 (mitochondrial carrier: glutamate), member 22 |
| SLC6A14 | solute carrier family 6 (amino acid transporter), member 14 |
| SMG9 | SMG9 nonsense mediated mRNA decay factor |
| SNHG20 | small nucleolar RNA host gene 20 |
| SOX12 | SRY (sex determining region Y)-box 12 |
| SPHK1 | sphingosine kinase 1 |
| SREK1 | splicing regulatory glutamine/lysine-rich protein 1 |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| STC2 | stanniocalcin 2 |
| SUZ12P1 | suppressor of zeste 12 homolog pseudogene 1 |
| TNFRSF1A | tumor necrosis factor receptor superfamily, member 1A |
| TOE1 | target of EGR1, member 1 (nuclear) |
| TRIB3 | tribbles pseudokinase 3 |
| TRIM16 | tripartite motif containing 16 |
| TRIM8 | tripartite motif containing 8 |
| TRPS1 | trichorhinophalangeal syndrome I |
| TSKU | tsukushi, small leucine rich proteoglycan |
| UBTF | upstream binding transcription factor, RNA polymerase I |
| UBXN8 | UBX domain protein 8 |
| URGCP | upregulator of cell proliferation |
| XBP1 | X-box binding protein 1 |
| YAP1 | Yes-associated protein 1 |
| ZBED1 | zinc finger, BED-type containing 1 |
| ZHX2 | zinc fingers and homeoboxes 2 |
| ZIC1 | Zic family member 1 |
| ZMIZ1 | zinc finger, MIZ-type containing 1 |
| ZNF33B | zinc finger protein 33B |
| ZNF652 | zinc finger protein 652 |
| ZNF692 | zinc finger protein 692 |
| ZNF787 | zinc finger protein 787 |
| ZNHIT2 | zinc finger, HIT-type containing 2 |
