| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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200 genes differentially expressed following the trichostatin A-1793 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABHD6 | abhydrolase domain containing 6 |
| ABTB2 | ankyrin repeat and BTB (POZ) domain containing 2 |
| ACSL3 | acyl-CoA synthetase long-chain family member 3 |
| ADRB2 | adrenoceptor beta 2, surface |
| ANGPTL4 | angiopoietin-like 4 |
| AQP3 | aquaporin 3 (Gill blood group) |
| ARG2 | arginase 2 |
| ARHGAP26 | Rho GTPase activating protein 26 |
| ARID5B | AT rich interactive domain 5B (MRF1-like) |
| ARNTL | aryl hydrocarbon receptor nuclear translocator-like |
| ASMTL | acetylserotonin O-methyltransferase-like |
| ATP7A | ATPase, Cu++ transporting, alpha polypeptide |
| AVPI1 | arginine vasopressin-induced 1 |
| BACH2 | BTB and CNC homology 1, basic leucine zipper transcription factor 2 |
| BAIAP2 | BAI1-associated protein 2 |
| BAMBI | BMP and activin membrane-bound inhibitor |
| BCL6 | B-cell CLL/lymphoma 6 |
| CCNA1 | cyclin A1 |
| CDC42EP3 | CDC42 effector protein (Rho GTPase binding) 3 |
| CDKN1A | cyclin-dependent kinase inhibitor 1A (p21, Cip1) |
| CFAP69 | cilia and flagella associated protein 69 |
| CORO1A | coronin, actin binding protein, 1A |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CTGF | connective tissue growth factor |
| CTH | cystathionine gamma-lyase |
| CXCR4 | chemokine (C-X-C motif) receptor 4 |
| CYR61 | cysteine-rich, angiogenic inducer, 61 |
| DHRS2 | dehydrogenase/reductase (SDR family) member 2 |
| DNAJC12 | DnaJ (Hsp40) homolog, subfamily C, member 12 |
| DNAJC6 | DnaJ (Hsp40) homolog, subfamily C, member 6 |
| DOPEY1 | dopey family member 1 |
| DUSP1 | dual specificity phosphatase 1 |
| DUSP10 | dual specificity phosphatase 10 |
| DUSP5 | dual specificity phosphatase 5 |
| DUSP6 | dual specificity phosphatase 6 |
| EFNB2 | ephrin-B2 |
| EGR2 | early growth response 2 |
| ELF3 | E74-like factor 3 (ets domain transcription factor, epithelial-specific ) |
| ELOVL4 | ELOVL fatty acid elongase 4 |
| EMP1 | epithelial membrane protein 1 |
| F11R | F11 receptor |
| FABP4 | fatty acid binding protein 4, adipocyte |
| FLRT3 | fibronectin leucine rich transmembrane protein 3 |
| FSCN1 | fascin actin-bundling protein 1 |
| FYN | FYN proto-oncogene, Src family tyrosine kinase |
| GLRX | glutaredoxin (thioltransferase) |
| GMCL1 | germ cell-less, spermatogenesis associated 1 |
| GMPR | guanosine monophosphate reductase |
| GPRC5A | G protein-coupled receptor, class C, group 5, member A |
| GTF2B | general transcription factor IIB |
| H1F0 | H1 histone family, member 0 |
| H1FX | H1 histone family, member X |
| ID2 | inhibitor of DNA binding 2, dominant negative helix-loop-helix protein |
| IL1RAP | interleukin 1 receptor accessory protein |
| INSIG1 | insulin induced gene 1 |
| IRF6 | interferon regulatory factor 6 |
| IRS2 | insulin receptor substrate 2 |
| KIF5C | kinesin family member 5C |
| LINC00341 | long intergenic non-protein coding RNA 341 |
| LMCD1 | LIM and cysteine-rich domains 1 |
| LPIN1 | lipin 1 |
| MAP2K3 | mitogen-activated protein kinase kinase 3 |
| MAT2A | methionine adenosyltransferase II, alpha |
| MGAT2 | mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase |
| MMP1 | matrix metallopeptidase 1 |
| MYBL1 | v-myb avian myeloblastosis viral oncogene homolog-like 1 |
| NEAT1 | nuclear paraspeckle assembly transcript 1 (non-protein coding) |
| NEDD4L | neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase |
| NEDD9 | neural precursor cell expressed, developmentally down-regulated 9 |
| NFIL3 | nuclear factor, interleukin 3 regulated |
| PCDH9 | protocadherin 9 |
| PDGFRA | platelet-derived growth factor receptor, alpha polypeptide |
| PI4K2A | phosphatidylinositol 4-kinase type 2 alpha |
| PMAIP1 | phorbol-12-myristate-13-acetate-induced protein 1 |
| PRKCD | protein kinase C, delta |
| PTGER4 | prostaglandin E receptor 4 (subtype EP4) |
| RAB11FIP1 | RAB11 family interacting protein 1 (class I) |
| RAI2 | retinoic acid induced 2 |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS4 | regulator of G-protein signaling 4 |
| RHOB | ras homolog family member B |
| RNF24 | ring finger protein 24 |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SLC30A1 | solute carrier family 30 (zinc transporter), member 1 |
| SLC9A3R1 | solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1 |
| SPTAN1 | spectrin, alpha, non-erythrocytic 1 |
| SQLE | squalene epoxidase |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STARD5 | StAR-related lipid transfer (START) domain containing 5 |
| STAT1 | signal transducer and activator of transcription 1, 91kDa |
| STC1 | stanniocalcin 1 |
| STK17B | serine/threonine kinase 17b |
| STOM | stomatin |
| SYT1 | synaptotagmin I |
| SYTL2 | synaptotagmin-like 2 |
| TAOK3 | TAO kinase 3 |
| TNIK | TRAF2 and NCK interacting kinase |
| TUBB2B | tubulin, beta 2B class IIb |
| TUFT1 | tuftelin 1 |
| ZCCHC24 | zinc finger, CCHC domain containing 24 |
| Symbol | Name |
|---|---|
| ADCY7 | adenylate cyclase 7 |
| ADNP | activity-dependent neuroprotector homeobox |
| AKAP8 | A kinase (PRKA) anchor protein 8 |
| AP5S1 | adaptor-related protein complex 5, sigma 1 subunit |
| ARHGEF5 | Rho guanine nucleotide exchange factor (GEF) 5 |
| BCAR3 | breast cancer anti-estrogen resistance 3 |
| BRIX1 | BRX1, biogenesis of ribosomes |
| CASD1 | CAS1 domain containing 1 |
| CBR3 | carbonyl reductase 3 |
| CLCF1 | cardiotrophin-like cytokine factor 1 |
| COA7 | cytochrome c oxidase assembly factor 7 (putative) |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| CUL1 | cullin 1 |
| DDX54 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 |
| DECR2 | 2,4-dienoyl CoA reductase 2, peroxisomal |
| DEPDC1 | DEP domain containing 1 |
| EXOSC10 | exosome component 10 |
| FADD | Fas (TNFRSF6)-associated via death domain |
| FAIM | Fas apoptotic inhibitory molecule |
| FOSL1 | FOS-like antigen 1 |
| FOXA1 | forkhead box A1 |
| FST | follistatin |
| GBX2 | gastrulation brain homeobox 2 |
| GLMN | glomulin, FKBP associated protein |
| GTF2IRD1 | GTF2I repeat domain containing 1 |
| H2AFY2 | H2A histone family, member Y2 |
| HAS2 | hyaluronan synthase 2 |
| HIRIP3 | HIRA interacting protein 3 |
| HMGA2 | high mobility group AT-hook 2 |
| INHBB | inhibin, beta B |
| IRF9 | interferon regulatory factor 9 |
| JADE1 | jade family PHD finger 1 |
| KAT5 | K(lysine) acetyltransferase 5 |
| KEAP1 | kelch-like ECH-associated protein 1 |
| LIF | leukemia inhibitory factor |
| LMNB1 | lamin B1 |
| LPAR1 | lysophosphatidic acid receptor 1 |
| LRFN4 | leucine rich repeat and fibronectin type III domain containing 4 |
| LRIF1 | ligand dependent nuclear receptor interacting factor 1 |
| LUC7L2 | LUC7-like 2 (S. cerevisiae) |
| MEPCE | methylphosphate capping enzyme |
| METTL8 | methyltransferase like 8 |
| MISP | mitotic spindle positioning |
| MSL2 | male-specific lethal 2 homolog (Drosophila) |
| MTPAP | mitochondrial poly(A) polymerase |
| MX1 | MX dynamin-like GTPase 1 |
| NACC2 | NACC family member 2, BEN and BTB (POZ) domain containing |
| NSD1 | nuclear receptor binding SET domain protein 1 |
| NUDT2 | nudix (nucleoside diphosphate linked moiety X)-type motif 2 |
| NUP62 | nucleoporin 62kDa |
| NUPR1 | nuclear protein, transcriptional regulator, 1 |
| PAGR1 | PAXIP1 associated glutamate-rich protein 1 |
| PHF11 | PHD finger protein 11 |
| PMM2 | phosphomannomutase 2 |
| PPAN | peter pan homolog (Drosophila) |
| PPCS | phosphopantothenoylcysteine synthetase |
| PRKRIP1 | PRKR interacting protein 1 (IL11 inducible) |
| PXDC1 | PX domain containing 1 |
| PYCARD | PYD and CARD domain containing |
| RBL1 | retinoblastoma-like 1 |
| RBM4B | RNA binding motif protein 4B |
| RIN2 | Ras and Rab interactor 2 |
| RPRD2 | regulation of nuclear pre-mRNA domain containing 2 |
| SCAF8 | SR-related CTD-associated factor 8 |
| SCO2 | SCO2 cytochrome c oxidase assembly protein |
| SERPINH1 | serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) |
| SETD1B | SET domain containing 1B |
| SETMAR | SET domain and mariner transposase fusion gene |
| SFMBT1 | Scm-like with four mbt domains 1 |
| SIM2 | single-minded family bHLH transcription factor 2 |
| SLC4A1AP | solute carrier family 4 (anion exchanger), member 1, adaptor protein |
| SMAGP | small cell adhesion glycoprotein |
| SMARCAL1 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 |
| SMYD5 | SMYD family member 5 |
| SNRNP35 | small nuclear ribonucleoprotein 35kDa (U11/U12) |
| SPHK1 | sphingosine kinase 1 |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| STBD1 | starch binding domain 1 |
| STRN4 | striatin, calmodulin binding protein 4 |
| STXBP3 | syntaxin binding protein 3 |
| SUV420H1 | suppressor of variegation 4-20 homolog 1 (Drosophila) |
| TACO1 | translational activator of mitochondrially encoded cytochrome c oxidase I |
| TGFB1I1 | transforming growth factor beta 1 induced transcript 1 |
| TOR3A | torsin family 3, member A |
| TRIB3 | tribbles pseudokinase 3 |
| TTC31 | tetratricopeptide repeat domain 31 |
| VEGFC | vascular endothelial growth factor C |
| VPS54 | vacuolar protein sorting 54 homolog (S. cerevisiae) |
| WBSCR16 | Williams-Beuren syndrome chromosome region 16 |
| WDR6 | WD repeat domain 6 |
| YARS2 | tyrosyl-tRNA synthetase 2, mitochondrial |
| ZC3H4 | zinc finger CCCH-type containing 4 |
| ZC3H7A | zinc finger CCCH-type containing 7A |
| ZCCHC10 | zinc finger, CCHC domain containing 10 |
| ZNF165 | zinc finger protein 165 |
| ZNF532 | zinc finger protein 532 |
| ZNF562 | zinc finger protein 562 |
| ZNF787 | zinc finger protein 787 |
| ZSCAN31 | zinc finger and SCAN domain containing 31 |
| ZZZ3 | zinc finger, ZZ-type containing 3 |
