| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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200 genes differentially expressed following the trichostatin A-1835 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| AAMDC | adipogenesis associated, Mth938 domain containing |
| ABCA7 | ATP-binding cassette, sub-family A (ABC1), member 7 |
| ABHD6 | abhydrolase domain containing 6 |
| APBB2 | amyloid beta (A4) precursor protein-binding, family B, member 2 |
| APOE | apolipoprotein E |
| APP | amyloid beta (A4) precursor protein |
| ARMC9 | armadillo repeat containing 9 |
| ARNTL | aryl hydrocarbon receptor nuclear translocator-like |
| ATP10D | ATPase, class V, type 10D |
| ATP13A2 | ATPase type 13A2 |
| ATP1B1 | ATPase, Na+/K+ transporting, beta 1 polypeptide |
| ATP8B2 | ATPase, aminophospholipid transporter, class I, type 8B, member 2 |
| BACE1 | beta-site APP-cleaving enzyme 1 |
| BHLHE41 | basic helix-loop-helix family, member e41 |
| BIK | BCL2-interacting killer (apoptosis-inducing) |
| BTN2A2 | butyrophilin, subfamily 2, member A2 |
| CAMSAP2 | calmodulin regulated spectrin-associated protein family, member 2 |
| CAPRIN2 | caprin family member 2 |
| CD59 | CD59 molecule, complement regulatory protein |
| CD70 | CD70 molecule |
| CDKN1C | cyclin-dependent kinase inhibitor 1C (p57, Kip2) |
| CDR2L | cerebellar degeneration-related protein 2-like |
| CEP70 | centrosomal protein 70kDa |
| CPM | carboxypeptidase M |
| CPNE3 | copine III |
| CREB3 | cAMP responsive element binding protein 3 |
| CRYL1 | crystallin, lambda 1 |
| CYB5R1 | cytochrome b5 reductase 1 |
| CYP2A6 | cytochrome P450, family 2, subfamily A, polypeptide 6 |
| DFNA5 | deafness, autosomal dominant 5 |
| DNAJC6 | DnaJ (Hsp40) homolog, subfamily C, member 6 |
| ECI2 | enoyl-CoA delta isomerase 2 |
| EFNA3 | ephrin-A3 |
| EPB41L2 | erythrocyte membrane protein band 4.1-like 2 |
| ERN2 | endoplasmic reticulum to nucleus signaling 2 |
| EXTL2 | exostosin-like glycosyltransferase 2 |
| F12 | coagulation factor XII (Hageman factor) |
| FEZ1 | fasciculation and elongation protein zeta 1 (zygin I) |
| FNBP1L | formin binding protein 1-like |
| FUCA1 | fucosidase, alpha-L- 1, tissue |
| GCDH | glutaryl-CoA dehydrogenase |
| GCH1 | GTP cyclohydrolase 1 |
| GPR65 | G protein-coupled receptor 65 |
| H1F0 | H1 histone family, member 0 |
| HOXA1 | homeobox A1 |
| ID3 | inhibitor of DNA binding 3, dominant negative helix-loop-helix protein |
| ITIH4 | inter-alpha-trypsin inhibitor heavy chain family, member 4 |
| KDELC1 | KDEL (Lys-Asp-Glu-Leu) containing 1 |
| KIAA0040 | KIAA0040 |
| KIF5C | kinesin family member 5C |
| KMO | kynurenine 3-monooxygenase (kynurenine 3-hydroxylase) |
| KRCC1 | lysine-rich coiled-coil 1 |
| LIMA1 | LIM domain and actin binding 1 |
| MAP2K6 | mitogen-activated protein kinase kinase 6 |
| MAPRE2 | microtubule-associated protein, RP/EB family, member 2 |
| MARCKS | myristoylated alanine-rich protein kinase C substrate |
| MARK4 | MAP/microtubule affinity-regulating kinase 4 |
| MAST2 | microtubule associated serine/threonine kinase 2 |
| MBOAT2 | membrane bound O-acyltransferase domain containing 2 |
| MLLT3 | myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 |
| MPZL1 | myelin protein zero-like 1 |
| MYBL1 | v-myb avian myeloblastosis viral oncogene homolog-like 1 |
| MYH10 | myosin, heavy chain 10, non-muscle |
| NCAM1 | neural cell adhesion molecule 1 |
| NDRG2 | NDRG family member 2 |
| PCGF2 | polycomb group ring finger 2 |
| PCNXL2 | pecanex-like 2 (Drosophila) |
| PEX1 | peroxisomal biogenesis factor 1 |
| PEX3 | peroxisomal biogenesis factor 3 |
| PFN2 | profilin 2 |
| PLS1 | plastin 1 |
| POU4F1 | POU class 4 homeobox 1 |
| PPFIBP1 | PTPRF interacting protein, binding protein 1 (liprin beta 1) |
| PRKAR2B | protein kinase, cAMP-dependent, regulatory, type II, beta |
| PROCR | protein C receptor, endothelial |
| PTCH1 | patched 1 |
| RABAC1 | Rab acceptor 1 (prenylated) |
| RECK | reversion-inducing-cysteine-rich protein with kazal motifs |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RIMS3 | regulating synaptic membrane exocytosis 3 |
| RIN2 | Ras and Rab interactor 2 |
| RPS4Y1 | ribosomal protein S4, Y-linked 1 |
| SCML1 | sex comb on midleg-like 1 (Drosophila) |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SPINT1 | serine peptidase inhibitor, Kunitz type 1 |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STXBP1 | syntaxin binding protein 1 |
| SUGP1 | SURP and G patch domain containing 1 |
| TCN1 | transcobalamin I (vitamin B12 binding protein, R binder family) |
| TESK2 | testis-specific kinase 2 |
| TPBG | trophoblast glycoprotein |
| TPD52L1 | tumor protein D52-like 1 |
| TPST1 | tyrosylprotein sulfotransferase 1 |
| TSPAN13 | tetraspanin 13 |
| TSPAN4 | tetraspanin 4 |
| TSPYL2 | TSPY-like 2 |
| TUBB2A | tubulin, beta 2A class IIa |
| TUFT1 | tuftelin 1 |
| WDR19 | WD repeat domain 19 |
| WLS | wntless Wnt ligand secretion mediator |
| Symbol | Name |
|---|---|
| ADGRE5 | adhesion G protein-coupled receptor E5 |
| ANP32A-IT1 | ANP32A intronic transcript 1 |
| AP5S1 | adaptor-related protein complex 5, sigma 1 subunit |
| ATAD3A | ATPase family, AAA domain containing 3A |
| ATP8B1 | ATPase, aminophospholipid transporter, class I, type 8B, member 1 |
| AVEN | apoptosis, caspase activation inhibitor |
| BRD9 | bromodomain containing 9 |
| C4ORF29 | chromosome 4 open reading frame 29 |
| C8ORF33 | chromosome 8 open reading frame 33 |
| CARD9 | caspase recruitment domain family, member 9 |
| CBFA2T3 | core-binding factor, runt domain, alpha subunit 2; translocated to, 3 |
| CCDC94 | coiled-coil domain containing 94 |
| CCL2 | chemokine (C-C motif) ligand 2 |
| CCNJ | cyclin J |
| CENPT | centromere protein T |
| CISH | cytokine inducible SH2-containing protein |
| CLEC11A | C-type lectin domain family 11, member A |
| CLPB | ClpB homolog, mitochondrial AAA ATPase chaperonin |
| CLSPN | claspin |
| CLTCL1 | clathrin, heavy chain-like 1 |
| COG7 | component of oligomeric golgi complex 7 |
| CSF1R | colony stimulating factor 1 receptor |
| CXORF21 | chromosome X open reading frame 21 |
| DCUN1D2 | DCN1, defective in cullin neddylation 1, domain containing 2 |
| DDX54 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 |
| DIP2A | DIP2 disco-interacting protein 2 homolog A (Drosophila) |
| FAM172A | family with sequence similarity 172, member A |
| FES | FES proto-oncogene, tyrosine kinase |
| FHL3 | four and a half LIM domains 3 |
| FPGS | folylpolyglutamate synthase |
| GINS4 | GINS complex subunit 4 (Sld5 homolog) |
| GRAMD4 | GRAM domain containing 4 |
| GUSBP3 | glucuronidase, beta pseudogene 3 |
| HIRA | histone cell cycle regulator |
| HMGB3 | high mobility group box 3 |
| HMGB3P1 | high mobility group box 3 pseudogene 1 |
| HMHA1 | histocompatibility (minor) HA-1 |
| IFIT2 | interferon-induced protein with tetratricopeptide repeats 2 |
| IFIT3 | interferon-induced protein with tetratricopeptide repeats 3 |
| IFITM3 | interferon induced transmembrane protein 3 |
| ISG15 | ISG15 ubiquitin-like modifier |
| ITPKB | inositol-trisphosphate 3-kinase B |
| JUNB | jun B proto-oncogene |
| KAT2A | K(lysine) acetyltransferase 2A |
| KATNBL1 | katanin p80 subunit B-like 1 |
| KBTBD11 | kelch repeat and BTB (POZ) domain containing 11 |
| LANCL2 | LanC lantibiotic synthetase component C-like 2 (bacterial) |
| LRRC37A3 | leucine rich repeat containing 37, member A3 |
| MAFG | v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G |
| MCM9 | minichromosome maintenance complex component 9 |
| MCRS1 | microspherule protein 1 |
| MEPCE | methylphosphate capping enzyme |
| MON1B | MON1 secretory trafficking family member B |
| MPDU1 | mannose-P-dolichol utilization defect 1 |
| MRTO4 | mRNA turnover 4 homolog (S. cerevisiae) |
| MX1 | MX dynamin-like GTPase 1 |
| MX2 | MX dynamin-like GTPase 2 |
| NIP7 | NIP7, nucleolar pre-rRNA processing protein |
| PMF1 | polyamine-modulated factor 1 |
| PMM2 | phosphomannomutase 2 |
| PRRG4 | proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) |
| PSMB10 | proteasome (prosome, macropain) subunit, beta type, 10 |
| PTPN7 | protein tyrosine phosphatase, non-receptor type 7 |
| PTPRCAP | protein tyrosine phosphatase, receptor type, C-associated protein |
| PUS1 | pseudouridylate synthase 1 |
| PUS7 | pseudouridylate synthase 7 (putative) |
| RFWD3 | ring finger and WD repeat domain 3 |
| RGS19 | regulator of G-protein signaling 19 |
| RNF125 | ring finger protein 125, E3 ubiquitin protein ligase |
| RNH1 | ribonuclease/angiogenin inhibitor 1 |
| RPP40 | ribonuclease P/MRP 40kDa subunit |
| RRS1 | RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) |
| SCO2 | SCO2 cytochrome c oxidase assembly protein |
| SH2D3C | SH2 domain containing 3C |
| SLC43A1 | solute carrier family 43 (amino acid system L transporter), member 1 |
| SNHG3 | small nucleolar RNA host gene 3 |
| SUZ12P1 | suppressor of zeste 12 homolog pseudogene 1 |
| TINF2 | TERF1 (TRF1)-interacting nuclear factor 2 |
| TMEM186 | transmembrane protein 186 |
| TOR4A | torsin family 4, member A |
| TRMT2B | tRNA methyltransferase 2 homolog B (S. cerevisiae) |
| TRPM2 | transient receptor potential cation channel, subfamily M, member 2 |
| TUBA3C | tubulin, alpha 3c |
| UBE2O | ubiquitin-conjugating enzyme E2O |
| UBXN8 | UBX domain protein 8 |
| UEVLD | UEV and lactate/malate dehyrogenase domains |
| UNG | uracil-DNA glycosylase |
| UPK3A | uroplakin 3A |
| URB2 | URB2 ribosome biogenesis 2 homolog (S. cerevisiae) |
| UTP20 | UTP20, small subunit (SSU) processome component, homolog (yeast) |
| WBSCR16 | Williams-Beuren syndrome chromosome region 16 |
| XAF1 | XIAP associated factor 1 |
| ZBED1 | zinc finger, BED-type containing 1 |
| ZNF264 | zinc finger protein 264 |
| ZNF573 | zinc finger protein 573 |
| ZNF574 | zinc finger protein 574 |
| ZNF652 | zinc finger protein 652 |
| ZNF675 | zinc finger protein 675 |
| ZNF721 | zinc finger protein 721 |
| ZNF804A | zinc finger protein 804A |
