| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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198 genes differentially expressed following the trichostatin A-2137 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABCG1 | ATP-binding cassette, sub-family G (WHITE), member 1 |
| ADAM28 | ADAM metallopeptidase domain 28 |
| ADGRL1 | adhesion G protein-coupled receptor L1 |
| ADGRL2 | adhesion G protein-coupled receptor L2 |
| AMIGO2 | adhesion molecule with Ig-like domain 2 |
| ANG | angiogenin, ribonuclease, RNase A family, 5 |
| APBB2 | amyloid beta (A4) precursor protein-binding, family B, member 2 |
| APOE | apolipoprotein E |
| ARHGEF3 | Rho guanine nucleotide exchange factor (GEF) 3 |
| ARMC9 | armadillo repeat containing 9 |
| ATP13A2 | ATPase type 13A2 |
| ATP1B1 | ATPase, Na+/K+ transporting, beta 1 polypeptide |
| BIK | BCL2-interacting killer (apoptosis-inducing) |
| BIN1 | bridging integrator 1 |
| BMP6 | bone morphogenetic protein 6 |
| BTRC | beta-transducin repeat containing E3 ubiquitin protein ligase |
| C19ORF66 | chromosome 19 open reading frame 66 |
| CCDC92 | coiled-coil domain containing 92 |
| CD59 | CD59 molecule, complement regulatory protein |
| CDR2L | cerebellar degeneration-related protein 2-like |
| CFAP69 | cilia and flagella associated protein 69 |
| CLIP2 | CAP-GLY domain containing linker protein 2 |
| COLQ | collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase |
| CPTP | ceramide-1-phosphate transfer protein |
| CTNNA1 | catenin (cadherin-associated protein), alpha 1, 102kDa |
| DDAH2 | dimethylarginine dimethylaminohydrolase 2 |
| DHRS11 | dehydrogenase/reductase (SDR family) member 11 |
| DNAJB5 | DnaJ (Hsp40) homolog, subfamily B, member 5 |
| DNAJC6 | DnaJ (Hsp40) homolog, subfamily C, member 6 |
| DOCK4 | dedicator of cytokinesis 4 |
| DOCK6 | dedicator of cytokinesis 6 |
| DSP | desmoplakin |
| ECI2 | enoyl-CoA delta isomerase 2 |
| EFNA4 | ephrin-A4 |
| EFNB2 | ephrin-B2 |
| EPAS1 | endothelial PAS domain protein 1 |
| ETV1 | ets variant 1 |
| EXPH5 | exophilin 5 |
| FAM65A | family with sequence similarity 65, member A |
| FGF9 | fibroblast growth factor 9 |
| FNBP1L | formin binding protein 1-like |
| GNRH1 | gonadotropin-releasing hormone 1 (luteinizing-releasing hormone) |
| ICAM5 | intercellular adhesion molecule 5, telencephalin |
| ITGA7 | integrin, alpha 7 |
| ITIH4 | inter-alpha-trypsin inhibitor heavy chain family, member 4 |
| KIAA0040 | KIAA0040 |
| KIF5C | kinesin family member 5C |
| KLF3 | Kruppel-like factor 3 (basic) |
| KLHL36 | kelch-like family member 36 |
| KLRG1 | killer cell lectin-like receptor subfamily G, member 1 |
| LHX2 | LIM homeobox 2 |
| LIN7B | lin-7 homolog B (C. elegans) |
| MAN1A1 | mannosidase, alpha, class 1A, member 1 |
| MARCKS | myristoylated alanine-rich protein kinase C substrate |
| MEF2C | myocyte enhancer factor 2C |
| MKL2 | MKL/myocardin-like 2 |
| MLLT3 | myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 |
| MNX1 | motor neuron and pancreas homeobox 1 |
| MPZL1 | myelin protein zero-like 1 |
| MYBL1 | v-myb avian myeloblastosis viral oncogene homolog-like 1 |
| MYO1B | myosin IB |
| NCAM1 | neural cell adhesion molecule 1 |
| NDNF | neuron-derived neurotrophic factor |
| NOTCH4 | notch 4 |
| NR4A2 | nuclear receptor subfamily 4, group A, member 2 |
| OLFML2A | olfactomedin-like 2A |
| PADI2 | peptidyl arginine deiminase, type II |
| PALLD | palladin, cytoskeletal associated protein |
| PCDH17 | protocadherin 17 |
| PCDH9 | protocadherin 9 |
| PCNXL2 | pecanex-like 2 (Drosophila) |
| PDGFRL | platelet-derived growth factor receptor-like |
| PFN2 | profilin 2 |
| PGAP1 | post-GPI attachment to proteins 1 |
| PLEKHA5 | pleckstrin homology domain containing, family A member 5 |
| PLS1 | plastin 1 |
| PORCN | porcupine homolog (Drosophila) |
| POU4F1 | POU class 4 homeobox 1 |
| PPARD | peroxisome proliferator-activated receptor delta |
| PTPN13 | protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) |
| PYCRL | pyrroline-5-carboxylate reductase-like |
| RAB26 | RAB26, member RAS oncogene family |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RPL13P5 | ribosomal protein L13 pseudogene 5 |
| RRN3P1 | RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1 |
| SCML1 | sex comb on midleg-like 1 (Drosophila) |
| SGCE | sarcoglycan, epsilon |
| STON1 | stonin 1 |
| SV2A | synaptic vesicle glycoprotein 2A |
| TBC1D2 | TBC1 domain family, member 2 |
| THAP10 | THAP domain containing 10 |
| TJAP1 | tight junction associated protein 1 (peripheral) |
| TMEM255A | transmembrane protein 255A |
| TPD52L1 | tumor protein D52-like 1 |
| TPMT | thiopurine S-methyltransferase |
| TSPAN13 | tetraspanin 13 |
| TUBB2A | tubulin, beta 2A class IIa |
| TUFT1 | tuftelin 1 |
| ZCCHC24 | zinc finger, CCHC domain containing 24 |
| ZNF862 | zinc finger protein 862 |
| Symbol | Name |
|---|---|
| ADAMTS5 | ADAM metallopeptidase with thrombospondin type 1 motif, 5 |
| ADI1 | acireductone dioxygenase 1 |
| AEN | apoptosis enhancing nuclease |
| AGPAT3 | 1-acylglycerol-3-phosphate O-acyltransferase 3 |
| APOL6 | apolipoprotein L, 6 |
| ARRB1 | arrestin, beta 1 |
| ASPSCR1 | alveolar soft part sarcoma chromosome region, candidate 1 |
| AVEN | apoptosis, caspase activation inhibitor |
| BCAT1 | branched chain amino-acid transaminase 1, cytosolic |
| BPI | bactericidal/permeability-increasing protein |
| BRIX1 | BRX1, biogenesis of ribosomes |
| C1ORF159 | chromosome 1 open reading frame 159 |
| C22ORF46 | chromosome 22 open reading frame 46 |
| CBFA2T3 | core-binding factor, runt domain, alpha subunit 2; translocated to, 3 |
| CCDC186 | coiled-coil domain containing 186 |
| CCDC86 | coiled-coil domain containing 86 |
| CCRN4L | CCR4 carbon catabolite repression 4-like (S. cerevisiae) |
| CENPT | centromere protein T |
| CES3 | carboxylesterase 3 |
| CHRNA9 | cholinergic receptor, nicotinic, alpha 9 (neuronal) |
| CIDEB | cell death-inducing DFFA-like effector b |
| CLCF1 | cardiotrophin-like cytokine factor 1 |
| CLEC4E | C-type lectin domain family 4, member E |
| COMMD10 | COMM domain containing 10 |
| DDN | dendrin |
| DEAF1 | DEAF1 transcription factor |
| DENND2D | DENN/MADD domain containing 2D |
| DEPTOR | DEP domain containing MTOR-interacting protein |
| DNAJA4 | DnaJ (Hsp40) homolog, subfamily A, member 4 |
| EEF2KMT | eukaryotic elongation factor 2 lysine methyltransferase |
| ERN2 | endoplasmic reticulum to nucleus signaling 2 |
| FCGR1A | Fc fragment of IgG, high affinity Ia, receptor (CD64) |
| FXN | frataxin |
| GABPA | GA binding protein transcription factor, alpha subunit 60kDa |
| GMEB1 | glucocorticoid modulatory element binding protein 1 |
| GNA13 | guanine nucleotide binding protein (G protein), alpha 13 |
| GPR22 | G protein-coupled receptor 22 |
| GTF2I | general transcription factor IIi |
| GTF3C5 | general transcription factor IIIC, polypeptide 5, 63kDa |
| HMGB3P1 | high mobility group box 3 pseudogene 1 |
| HOXC8 | homeobox C8 |
| HSPA1L | heat shock 70kDa protein 1-like |
| KCNA3 | potassium channel, voltage gated shaker related subfamily A, member 3 |
| KDM5C | lysine (K)-specific demethylase 5C |
| KLK5 | kallikrein-related peptidase 5 |
| KPTN | kaptin (actin binding protein) |
| LANCL2 | LanC lantibiotic synthetase component C-like 2 (bacterial) |
| LPPR3 | lipid phosphate phosphatase-related protein type 3 |
| LRP5 | low density lipoprotein receptor-related protein 5 |
| MAGEF1 | melanoma antigen family F1 |
| MBTPS2 | membrane-bound transcription factor peptidase, site 2 |
| METTL2B | methyltransferase like 2B |
| MOCS3 | molybdenum cofactor synthesis 3 |
| MS4A6A | membrane-spanning 4-domains, subfamily A, member 6A |
| NAT6 | N-acetyltransferase 6 (GCN5-related) |
| NCS1 | neuronal calcium sensor 1 |
| NECAB3 | N-terminal EF-hand calcium binding protein 3 |
| NOL10 | nucleolar protein 10 |
| NTSR1 | neurotensin receptor 1 (high affinity) |
| NUDT15 | nudix (nucleoside diphosphate linked moiety X)-type motif 15 |
| NUDT2 | nudix (nucleoside diphosphate linked moiety X)-type motif 2 |
| OR7E156P | olfactory receptor, family 7, subfamily E, member 156 pseudogene |
| OR7E47P | olfactory receptor, family 7, subfamily E, member 47 pseudogene |
| OXCT2 | 3-oxoacid CoA transferase 2 |
| PARPBP | PARP1 binding protein |
| PMCH | pro-melanin-concentrating hormone |
| PPCS | phosphopantothenoylcysteine synthetase |
| PRICKLE3 | prickle homolog 3 (Drosophila) |
| PSAT1 | phosphoserine aminotransferase 1 |
| PYCR1 | pyrroline-5-carboxylate reductase 1 |
| QTRT1 | queuine tRNA-ribosyltransferase 1 |
| RAB13 | RAB13, member RAS oncogene family |
| RNFT1 | ring finger protein, transmembrane 1 |
| RPL10L | ribosomal protein L10-like |
| RRP9 | ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast) |
| SLC12A2 | solute carrier family 12 (sodium/potassium/chloride transporter), member 2 |
| SMEK2 | SMEK homolog 2, suppressor of mek1 (Dictyostelium) |
| TAB1 | TGF-beta activated kinase 1/MAP3K7 binding protein 1 |
| TAGLN | transgelin |
| TCTN2 | tectonic family member 2 |
| TGFBR1 | transforming growth factor, beta receptor 1 |
| TMA16 | translation machinery associated 16 homolog (S. cerevisiae) |
| TMEM212 | transmembrane protein 212 |
| TMEM254 | transmembrane protein 254 |
| TRIM25 | tripartite motif containing 25 |
| TTC27 | tetratricopeptide repeat domain 27 |
| TWSG1 | twisted gastrulation BMP signaling modulator 1 |
| UCK2 | uridine-cytidine kinase 2 |
| USP19 | ubiquitin specific peptidase 19 |
| USP5 | ubiquitin specific peptidase 5 (isopeptidase T) |
| VEGFB | vascular endothelial growth factor B |
| VNN2 | vanin 2 |
| ZBTB38 | zinc finger and BTB domain containing 38 |
| ZBTB6 | zinc finger and BTB domain containing 6 |
| ZNF675 | zinc finger protein 675 |
| ZNF749 | zinc finger protein 749 |
| ZNHIT2 | zinc finger, HIT-type containing 2 |
| ZSCAN5A | zinc finger and SCAN domain containing 5A |
