| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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200 genes differentially expressed following the trichostatin A-2208 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABCG1 | ATP-binding cassette, sub-family G (WHITE), member 1 |
| ADGRL2 | adhesion G protein-coupled receptor L2 |
| AMIGO2 | adhesion molecule with Ig-like domain 2 |
| APBB2 | amyloid beta (A4) precursor protein-binding, family B, member 2 |
| ARG2 | arginase 2 |
| ARMC9 | armadillo repeat containing 9 |
| ATP13A2 | ATPase type 13A2 |
| ATP8A1 | ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 |
| BIK | BCL2-interacting killer (apoptosis-inducing) |
| C17ORF59 | chromosome 17 open reading frame 59 |
| C21ORF2 | chromosome 21 open reading frame 2 |
| CD59 | CD59 molecule, complement regulatory protein |
| CDR2L | cerebellar degeneration-related protein 2-like |
| CKB | creatine kinase, brain |
| CNTN5 | contactin 5 |
| CREB3L1 | cAMP responsive element binding protein 3-like 1 |
| CTSV | cathepsin V |
| CYFIP2 | cytoplasmic FMR1 interacting protein 2 |
| DAB2 | Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) |
| DHRS9 | dehydrogenase/reductase (SDR family) member 9 |
| DKFZP434C153 | DKFZP434C153 protein |
| DNAJC6 | DnaJ (Hsp40) homolog, subfamily C, member 6 |
| DNPH1 | 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 |
| DOCK4 | dedicator of cytokinesis 4 |
| DOCK6 | dedicator of cytokinesis 6 |
| DSC3 | desmocollin 3 |
| DSE | dermatan sulfate epimerase |
| DSP | desmoplakin |
| ECI2 | enoyl-CoA delta isomerase 2 |
| EFNB2 | ephrin-B2 |
| EPAS1 | endothelial PAS domain protein 1 |
| ETV1 | ets variant 1 |
| F11R | F11 receptor |
| FAS | Fas cell surface death receptor |
| FBP1 | fructose-1,6-bisphosphatase 1 |
| FGF9 | fibroblast growth factor 9 |
| FZD4 | frizzled class receptor 4 |
| GIPC1 | GIPC PDZ domain containing family, member 1 |
| HNF1B | HNF1 homeobox B |
| HSF2BP | heat shock transcription factor 2 binding protein |
| HSPA2 | heat shock 70kDa protein 2 |
| ID3 | inhibitor of DNA binding 3, dominant negative helix-loop-helix protein |
| IGF2BP2 | insulin-like growth factor 2 mRNA binding protein 2 |
| IGFBP2 | insulin-like growth factor binding protein 2, 36kDa |
| IMPG2 | interphotoreceptor matrix proteoglycan 2 |
| INHBA | inhibin, beta A |
| ITGB1 | integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) |
| KDELC1 | KDEL (Lys-Asp-Glu-Leu) containing 1 |
| KIF5A | kinesin family member 5A |
| KIF5C | kinesin family member 5C |
| KLC2 | kinesin light chain 2 |
| LAD1 | ladinin 1 |
| LOC730101 | uncharacterized LOC730101 |
| MAL | mal, T-cell differentiation protein |
| MARCKS | myristoylated alanine-rich protein kinase C substrate |
| METTL7A | methyltransferase like 7A |
| MLF1 | myeloid leukemia factor 1 |
| MLLT3 | myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 |
| MPZL1 | myelin protein zero-like 1 |
| MTUS1 | microtubule associated tumor suppressor 1 |
| MVP | major vault protein |
| MYO1B | myosin IB |
| NCAM1 | neural cell adhesion molecule 1 |
| NOTCH4 | notch 4 |
| NPY6R | neuropeptide Y receptor Y6 (pseudogene) |
| NRP1 | neuropilin 1 |
| OLFML2A | olfactomedin-like 2A |
| PALLD | palladin, cytoskeletal associated protein |
| PAPSS2 | 3'-phosphoadenosine 5'-phosphosulfate synthase 2 |
| PAX5 | paired box 5 |
| PCNXL2 | pecanex-like 2 (Drosophila) |
| PDE4DIP | phosphodiesterase 4D interacting protein |
| PDGFRL | platelet-derived growth factor receptor-like |
| PFN2 | profilin 2 |
| PLCL1 | phospholipase C-like 1 |
| PLEKHA5 | pleckstrin homology domain containing, family A member 5 |
| PLS1 | plastin 1 |
| PLSCR3 | phospholipid scramblase 3 |
| PMP22 | peripheral myelin protein 22 |
| POU4F1 | POU class 4 homeobox 1 |
| RASAL2 | RAS protein activator like 2 |
| RIMS3 | regulating synaptic membrane exocytosis 3 |
| SLAMF7 | SLAM family member 7 |
| SPTLC2 | serine palmitoyltransferase, long chain base subunit 2 |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STAT4 | signal transducer and activator of transcription 4 |
| STON1 | stonin 1 |
| TCN1 | transcobalamin I (vitamin B12 binding protein, R binder family) |
| TEX15 | testis expressed 15 |
| TIMM8A | translocase of inner mitochondrial membrane 8 homolog A (yeast) |
| TNIK | TRAF2 and NCK interacting kinase |
| TNNT1 | troponin T type 1 (skeletal, slow) |
| TP53I11 | tumor protein p53 inducible protein 11 |
| TPD52L1 | tumor protein D52-like 1 |
| TPM1 | tropomyosin 1 (alpha) |
| TRIM9 | tripartite motif containing 9 |
| TSPAN13 | tetraspanin 13 |
| TTC38 | tetratricopeptide repeat domain 38 |
| TUBB2A | tubulin, beta 2A class IIa |
| TUFT1 | tuftelin 1 |
| Symbol | Name |
|---|---|
| ABCC6 | ATP-binding cassette, sub-family C (CFTR/MRP), member 6 |
| ACTR8 | ARP8 actin-related protein 8 homolog (yeast) |
| ADGRE3 | adhesion G protein-coupled receptor E3 |
| ADI1 | acireductone dioxygenase 1 |
| AIPL1 | aryl hydrocarbon receptor interacting protein-like 1 |
| ARSB | arylsulfatase B |
| ASAP1-IT1 | ASAP1 intronic transcript 1 |
| ASGR2 | asialoglycoprotein receptor 2 |
| AVEN | apoptosis, caspase activation inhibitor |
| B9D2 | B9 protein domain 2 |
| BAHCC1 | BAH domain and coiled-coil containing 1 |
| BGLAP | bone gamma-carboxyglutamate (gla) protein |
| C11ORF68 | chromosome 11 open reading frame 68 |
| C14ORF93 | chromosome 14 open reading frame 93 |
| C17ORF70 | chromosome 17 open reading frame 70 |
| C22ORF29 | chromosome 22 open reading frame 29 |
| CCDC85C | coiled-coil domain containing 85C |
| CCDC9 | coiled-coil domain containing 9 |
| CD320 | CD320 molecule |
| CENPO | centromere protein O |
| CHST7 | carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 |
| CNTN1 | contactin 1 |
| CORT | cortistatin |
| CPSF7 | cleavage and polyadenylation specific factor 7, 59kDa |
| DCPS | decapping enzyme, scavenger |
| DGKG | diacylglycerol kinase, gamma 90kDa |
| DOC2A | double C2-like domains, alpha |
| DOK3 | docking protein 3 |
| EEF2KMT | eukaryotic elongation factor 2 lysine methyltransferase |
| EPX | eosinophil peroxidase |
| FRMD1 | FERM domain containing 1 |
| GTPBP6 | GTP binding protein 6 (putative) |
| HERC6 | HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 |
| HIST1H4F | histone cluster 1, H4f |
| HS1BP3 | HCLS1 binding protein 3 |
| IDI2-AS1 | IDI2 antisense RNA 1 |
| IFRD2 | interferon-related developmental regulator 2 |
| IL12RB1 | interleukin 12 receptor, beta 1 |
| IL1RAPL2 | interleukin 1 receptor accessory protein-like 2 |
| IRF8 | interferon regulatory factor 8 |
| JADE1 | jade family PHD finger 1 |
| JMJD4 | jumonji domain containing 4 |
| KCNA3 | potassium channel, voltage gated shaker related subfamily A, member 3 |
| KCNK5 | potassium channel, two pore domain subfamily K, member 5 |
| KCNMB2 | potassium channel subfamily M regulatory beta subunit 2 |
| KDM8 | lysine (K)-specific demethylase 8 |
| KPTN | kaptin (actin binding protein) |
| LECT1 | leukocyte cell derived chemotaxin 1 |
| LIMS2 | LIM and senescent cell antigen-like domains 2 |
| LLPH | LLP homolog, long-term synaptic facilitation (Aplysia) |
| LRRK1 | leucine-rich repeat kinase 1 |
| ME3 | malic enzyme 3, NADP(+)-dependent, mitochondrial |
| METTL8 | methyltransferase like 8 |
| MMRN2 | multimerin 2 |
| MS4A6A | membrane-spanning 4-domains, subfamily A, member 6A |
| MUC3A | mucin 3A, cell surface associated |
| NCS1 | neuronal calcium sensor 1 |
| NDE1 | nudE neurodevelopment protein 1 |
| NFKBIB | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta |
| NFKBIL1 | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1 |
| NIPAL2 | NIPA-like domain containing 2 |
| NR3C2 | nuclear receptor subfamily 3, group C, member 2 |
| NT5M | 5',3'-nucleotidase, mitochondrial |
| NTF3 | neurotrophin 3 |
| NUDT15 | nudix (nucleoside diphosphate linked moiety X)-type motif 15 |
| OMG | oligodendrocyte myelin glycoprotein |
| OR1D2 | olfactory receptor, family 1, subfamily D, member 2 |
| PPDPF | pancreatic progenitor cell differentiation and proliferation factor |
| PROL1 | proline rich, lacrimal 1 |
| PTPRS | protein tyrosine phosphatase, receptor type, S |
| RABL6 | RAB, member RAS oncogene family-like 6 |
| RCL1 | RNA terminal phosphate cyclase-like 1 |
| RGS19 | regulator of G-protein signaling 19 |
| RIPK1 | receptor (TNFRSF)-interacting serine-threonine kinase 1 |
| RNASE3 | ribonuclease, RNase A family, 3 |
| RNASEL | ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent) |
| RNH1 | ribonuclease/angiogenin inhibitor 1 |
| RSAD1 | radical S-adenosyl methionine domain containing 1 |
| RWDD3 | RWD domain containing 3 |
| SH2D4A | SH2 domain containing 4A |
| SLC2A8 | solute carrier family 2 (facilitated glucose transporter), member 8 |
| SP1 | Sp1 transcription factor |
| SULT1B1 | sulfotransferase family, cytosolic, 1B, member 1 |
| SYNC | syncoilin, intermediate filament protein |
| TAF15 | TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa |
| TBKBP1 | TBK1 binding protein 1 |
| TERT | telomerase reverse transcriptase |
| TKFC | triokinase/FMN cyclase |
| TMEM2 | transmembrane protein 2 |
| TMEM212 | transmembrane protein 212 |
| TPM3 | tropomyosin 3 |
| TRMT12 | tRNA methyltransferase 12 homolog (S. cerevisiae) |
| TSC22D4 | TSC22 domain family, member 4 |
| TSPYL2 | TSPY-like 2 |
| TTC27 | tetratricopeptide repeat domain 27 |
| USP19 | ubiquitin specific peptidase 19 |
| USP36 | ubiquitin specific peptidase 36 |
| WBSCR16 | Williams-Beuren syndrome chromosome region 16 |
| ZBTB38 | zinc finger and BTB domain containing 38 |
| ZCWPW1 | zinc finger, CW type with PWWP domain 1 |
