| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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197 genes differentially expressed following the trichostatin A-2247 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ACSBG1 | acyl-CoA synthetase bubblegum family member 1 |
| ADM | adrenomedullin |
| AHNAK2 | AHNAK nucleoprotein 2 |
| ANG | angiogenin, ribonuclease, RNase A family, 5 |
| ANGPTL4 | angiopoietin-like 4 |
| ARMCX2 | armadillo repeat containing, X-linked 2 |
| ASAP3 | ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 |
| BAIAP3 | BAI1-associated protein 3 |
| BIRC3 | baculoviral IAP repeat containing 3 |
| CA5B | carbonic anhydrase VB, mitochondrial |
| CASC1 | cancer susceptibility candidate 1 |
| CDKN2D | cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) |
| CEP112 | centrosomal protein 112kDa |
| CLGN | calmegin |
| CORO1A | coronin, actin binding protein, 1A |
| CXADR | coxsackie virus and adenovirus receptor |
| CYLD | cylindromatosis (turban tumor syndrome) |
| CYP46A1 | cytochrome P450, family 46, subfamily A, polypeptide 1 |
| DHRS2 | dehydrogenase/reductase (SDR family) member 2 |
| DLX2 | distal-less homeobox 2 |
| DNAJC12 | DnaJ (Hsp40) homolog, subfamily C, member 12 |
| DOCK4 | dedicator of cytokinesis 4 |
| DPF1 | D4, zinc and double PHD fingers family 1 |
| DPYSL4 | dihydropyrimidinase-like 4 |
| DYRK3 | dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 |
| EFNB3 | ephrin-B3 |
| ELOVL4 | ELOVL fatty acid elongase 4 |
| FAM46C | family with sequence similarity 46, member C |
| FKBP1B | FK506 binding protein 1B, 12.6 kDa |
| FYN | FYN proto-oncogene, Src family tyrosine kinase |
| GEM | GTP binding protein overexpressed in skeletal muscle |
| GFPT2 | glutamine-fructose-6-phosphate transaminase 2 |
| GLDC | glycine dehydrogenase (decarboxylating) |
| GLRX | glutaredoxin (thioltransferase) |
| GMPR | guanosine monophosphate reductase |
| GRK5 | G protein-coupled receptor kinase 5 |
| HBEGF | heparin-binding EGF-like growth factor |
| HEY1 | hes-related family bHLH transcription factor with YRPW motif 1 |
| HLA-DMB | major histocompatibility complex, class II, DM beta |
| HOXA1 | homeobox A1 |
| HPCAL4 | hippocalcin like 4 |
| HYAL1 | hyaluronoglucosaminidase 1 |
| IFI6 | interferon, alpha-inducible protein 6 |
| IFIT1 | interferon-induced protein with tetratricopeptide repeats 1 |
| IL21R | interleukin 21 receptor |
| ITM2C | integral membrane protein 2C |
| KIAA0513 | KIAA0513 |
| KIF21B | kinesin family member 21B |
| KLHL24 | kelch-like family member 24 |
| LINC00341 | long intergenic non-protein coding RNA 341 |
| LYST | lysosomal trafficking regulator |
| MAPRE2 | microtubule-associated protein, RP/EB family, member 2 |
| MUC3B | mucin 3B, cell surface associated |
| NAP1L3 | nucleosome assembly protein 1-like 3 |
| NEAT1 | nuclear paraspeckle assembly transcript 1 (non-protein coding) |
| NPC1 | Niemann-Pick disease, type C1 |
| NR6A1 | nuclear receptor subfamily 6, group A, member 1 |
| OASL | 2'-5'-oligoadenylate synthetase-like |
| PADI3 | peptidyl arginine deiminase, type III |
| PLCD1 | phospholipase C, delta 1 |
| PLEKHF1 | pleckstrin homology domain containing, family F (with FYVE domain) member 1 |
| PPM1E | protein phosphatase, Mg2+/Mn2+ dependent, 1E |
| PRPH | peripherin |
| PSMB9 | proteasome (prosome, macropain) subunit, beta type, 9 |
| PTAFR | platelet-activating factor receptor |
| PTRF | polymerase I and transcript release factor |
| RAI2 | retinoic acid induced 2 |
| RGCC | regulator of cell cycle |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS2 | regulator of G-protein signaling 2 |
| RND1 | Rho family GTPase 1 |
| RNFT1 | ring finger protein, transmembrane 1 |
| RPL3L | ribosomal protein L3-like |
| RPS6KA5 | ribosomal protein S6 kinase, 90kDa, polypeptide 5 |
| RTN2 | reticulon 2 |
| RUNDC3B | RUN domain containing 3B |
| SEPP1 | selenoprotein P, plasma, 1 |
| SERPINB5 | serpin peptidase inhibitor, clade B (ovalbumin), member 5 |
| SERPINB9 | serpin peptidase inhibitor, clade B (ovalbumin), member 9 |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SIRT4 | sirtuin 4 |
| SLC17A7 | solute carrier family 17 (vesicular glutamate transporter), member 7 |
| SLC30A3 | solute carrier family 30 (zinc transporter), member 3 |
| SORBS1 | sorbin and SH3 domain containing 1 |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STON1 | stonin 1 |
| SYT11 | synaptotagmin XI |
| TBXA2R | thromboxane A2 receptor |
| TMEM45A | transmembrane protein 45A |
| TUFT1 | tuftelin 1 |
| TXNIP | thioredoxin interacting protein |
| VAMP1 | vesicle-associated membrane protein 1 (synaptobrevin 1) |
| ZBTB18 | zinc finger and BTB domain containing 18 |
| ZCCHC24 | zinc finger, CCHC domain containing 24 |
| ZDHHC11 | zinc finger, DHHC-type containing 11 |
| ZNF10 | zinc finger protein 10 |
| ZNF204P | zinc finger protein 204, pseudogene |
| Symbol | Name |
|---|---|
| ACKR3 | atypical chemokine receptor 3 |
| ADNP | activity-dependent neuroprotector homeobox |
| AMIGO2 | adhesion molecule with Ig-like domain 2 |
| AP5S1 | adaptor-related protein complex 5, sigma 1 subunit |
| ARHGEF1 | Rho guanine nucleotide exchange factor (GEF) 1 |
| ARHGEF16 | Rho guanine nucleotide exchange factor (GEF) 16 |
| ATAD2B | ATPase family, AAA domain containing 2B |
| BATF | basic leucine zipper transcription factor, ATF-like |
| BRINP3 | bone morphogenetic protein/retinoic acid inducible neural-specific 3 |
| C5AR2 | complement component 5a receptor 2 |
| CALHM2 | calcium homeostasis modulator 2 |
| CASD1 | CAS1 domain containing 1 |
| CBFA2T3 | core-binding factor, runt domain, alpha subunit 2; translocated to, 3 |
| CCDC94 | coiled-coil domain containing 94 |
| CCND1 | cyclin D1 |
| CDK5RAP2 | CDK5 regulatory subunit associated protein 2 |
| CLCF1 | cardiotrophin-like cytokine factor 1 |
| CNNM1 | cyclin and CBS domain divalent metal cation transport mediator 1 |
| COIL | coilin |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| CTDSP1 | CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 |
| CUL1 | cullin 1 |
| CXCL12 | chemokine (C-X-C motif) ligand 12 |
| CYP26A1 | cytochrome P450, family 26, subfamily A, polypeptide 1 |
| DKK1 | dickkopf WNT signaling pathway inhibitor 1 |
| DNAJC7 | DnaJ (Hsp40) homolog, subfamily C, member 7 |
| EGR3 | early growth response 3 |
| EOGT | EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase |
| FAM57A | family with sequence similarity 57, member A |
| FJX1 | four jointed box 1 (Drosophila) |
| FOSL1 | FOS-like antigen 1 |
| FOXA1 | forkhead box A1 |
| GABPA | GA binding protein transcription factor, alpha subunit 60kDa |
| GABPB1 | GA binding protein transcription factor, beta subunit 1 |
| GALNT14 | polypeptide N-acetylgalactosaminyltransferase 14 |
| GMEB1 | glucocorticoid modulatory element binding protein 1 |
| HIRIP3 | HIRA interacting protein 3 |
| HIVEP1 | human immunodeficiency virus type I enhancer binding protein 1 |
| IL4R | interleukin 4 receptor |
| INHBB | inhibin, beta B |
| IRS1 | insulin receptor substrate 1 |
| IRX5 | iroquois homeobox 5 |
| ITPKB | inositol-trisphosphate 3-kinase B |
| KCNN4 | potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 4 |
| KCTD15 | potassium channel tetramerization domain containing 15 |
| KEAP1 | kelch-like ECH-associated protein 1 |
| KIAA0125 | KIAA0125 |
| KLF3 | Kruppel-like factor 3 (basic) |
| LIG3 | ligase III, DNA, ATP-dependent |
| LRFN4 | leucine rich repeat and fibronectin type III domain containing 4 |
| LUC7L2 | LUC7-like 2 (S. cerevisiae) |
| LY6D | lymphocyte antigen 6 complex, locus D |
| LY6G5C | lymphocyte antigen 6 complex, locus G5C |
| MEPCE | methylphosphate capping enzyme |
| MRM1 | mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae) |
| MSL1 | male-specific lethal 1 homolog (Drosophila) |
| MYC | v-myc avian myelocytomatosis viral oncogene homolog |
| MYD88 | myeloid differentiation primary response 88 |
| NACC2 | NACC family member 2, BEN and BTB (POZ) domain containing |
| NLRX1 | NLR family member X1 |
| NR2F6 | nuclear receptor subfamily 2, group F, member 6 |
| NRIP1 | nuclear receptor interacting protein 1 |
| NSMAF | neutral sphingomyelinase (N-SMase) activation associated factor |
| NUAK1 | NUAK family, SNF1-like kinase, 1 |
| OSGIN1 | oxidative stress induced growth inhibitor 1 |
| P2RY6 | pyrimidinergic receptor P2Y, G-protein coupled, 6 |
| PCDHB3 | protocadherin beta 3 |
| PDGFA | platelet-derived growth factor alpha polypeptide |
| POGK | pogo transposable element with KRAB domain |
| PPCS | phosphopantothenoylcysteine synthetase |
| PRCC | papillary renal cell carcinoma (translocation-associated) |
| PRR15L | proline rich 15-like |
| RASGRP1 | RAS guanyl releasing protein 1 (calcium and DAG-regulated) |
| RNF220 | ring finger protein 220 |
| RWDD3 | RWD domain containing 3 |
| SEMA4C | sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C |
| SETD1B | SET domain containing 1B |
| SH2D4A | SH2 domain containing 4A |
| SLC6A14 | solute carrier family 6 (amino acid transporter), member 14 |
| SNHG3 | small nucleolar RNA host gene 3 |
| SREK1 | splicing regulatory glutamine/lysine-rich protein 1 |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| STC2 | stanniocalcin 2 |
| TNS3 | tensin 3 |
| TRIB3 | tribbles pseudokinase 3 |
| TRMT2A | tRNA methyltransferase 2 homolog A (S. cerevisiae) |
| TSKU | tsukushi, small leucine rich proteoglycan |
| UBTF | upstream binding transcription factor, RNA polymerase I |
| UBXN8 | UBX domain protein 8 |
| USP21 | ubiquitin specific peptidase 21 |
| VWA9 | von Willebrand factor A domain containing 9 |
| XBP1 | X-box binding protein 1 |
| ZBED1 | zinc finger, BED-type containing 1 |
| ZFHX3 | zinc finger homeobox 3 |
| ZHX2 | zinc fingers and homeoboxes 2 |
| ZIC1 | Zic family member 1 |
| ZMIZ1 | zinc finger, MIZ-type containing 1 |
| ZNF692 | zinc finger protein 692 |
| ZNHIT2 | zinc finger, HIT-type containing 2 |
