| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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200 genes differentially expressed following the trichostatin A-2375 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABCG1 | ATP-binding cassette, sub-family G (WHITE), member 1 |
| ACOX2 | acyl-CoA oxidase 2, branched chain |
| ADD3 | adducin 3 (gamma) |
| ADGRL1 | adhesion G protein-coupled receptor L1 |
| AMIGO2 | adhesion molecule with Ig-like domain 2 |
| APBB2 | amyloid beta (A4) precursor protein-binding, family B, member 2 |
| ATP1B1 | ATPase, Na+/K+ transporting, beta 1 polypeptide |
| C19ORF66 | chromosome 19 open reading frame 66 |
| CAMSAP2 | calmodulin regulated spectrin-associated protein family, member 2 |
| CCDC28B | coiled-coil domain containing 28B |
| CCKAR | cholecystokinin A receptor |
| CD24 | CD24 molecule |
| CD5 | CD5 molecule |
| CD59 | CD59 molecule, complement regulatory protein |
| CDKN1C | cyclin-dependent kinase inhibitor 1C (p57, Kip2) |
| CKB | creatine kinase, brain |
| CX3CR1 | chemokine (C-X3-C motif) receptor 1 |
| DFNA5 | deafness, autosomal dominant 5 |
| DHRS9 | dehydrogenase/reductase (SDR family) member 9 |
| DNAJC6 | DnaJ (Hsp40) homolog, subfamily C, member 6 |
| DST | dystonin |
| DUSP4 | dual specificity phosphatase 4 |
| DZIP3 | DAZ interacting zinc finger protein 3 |
| ECI2 | enoyl-CoA delta isomerase 2 |
| EFNA3 | ephrin-A3 |
| EFNB2 | ephrin-B2 |
| EGFR | epidermal growth factor receptor |
| ENO2 | enolase 2 (gamma, neuronal) |
| EPAS1 | endothelial PAS domain protein 1 |
| ERG | v-ets avian erythroblastosis virus E26 oncogene homolog |
| ETV1 | ets variant 1 |
| EXPH5 | exophilin 5 |
| FAM49A | family with sequence similarity 49, member A |
| FAM69A | family with sequence similarity 69, member A |
| FAT2 | FAT atypical cadherin 2 |
| FOXO1 | forkhead box O1 |
| GABRA5 | gamma-aminobutyric acid (GABA) A receptor, alpha 5 |
| GAS6 | growth arrest-specific 6 |
| GBP2 | guanylate binding protein 2, interferon-inducible |
| GCH1 | GTP cyclohydrolase 1 |
| GCNT4 | glucosaminyl (N-acetyl) transferase 4, core 2 |
| HNF1B | HNF1 homeobox B |
| JAM2 | junctional adhesion molecule 2 |
| KIF5C | kinesin family member 5C |
| LINC00652 | long intergenic non-protein coding RNA 652 |
| MARCKS | myristoylated alanine-rich protein kinase C substrate |
| MEF2C | myocyte enhancer factor 2C |
| MMP19 | matrix metallopeptidase 19 |
| MNX1 | motor neuron and pancreas homeobox 1 |
| MPZL1 | myelin protein zero-like 1 |
| MTSS1 | metastasis suppressor 1 |
| MYBL1 | v-myb avian myeloblastosis viral oncogene homolog-like 1 |
| NCAM1 | neural cell adhesion molecule 1 |
| NR4A1 | nuclear receptor subfamily 4, group A, member 1 |
| NRGN | neurogranin (protein kinase C substrate, RC3) |
| NTS | neurotensin |
| PCGF2 | polycomb group ring finger 2 |
| PCNXL2 | pecanex-like 2 (Drosophila) |
| PDE4DIP | phosphodiesterase 4D interacting protein |
| PFN2 | profilin 2 |
| PIK3C2B | phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta |
| PIP | prolactin-induced protein |
| PLCD1 | phospholipase C, delta 1 |
| PLXDC1 | plexin domain containing 1 |
| POU4F1 | POU class 4 homeobox 1 |
| PPP1R16B | protein phosphatase 1, regulatory subunit 16B |
| PRKCQ | protein kinase C, theta |
| RASAL1 | RAS protein activator like 1 (GAP1 like) |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RIMS3 | regulating synaptic membrane exocytosis 3 |
| RRAS | related RAS viral (r-ras) oncogene homolog |
| SCML1 | sex comb on midleg-like 1 (Drosophila) |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SLC10A1 | solute carrier family 10 (sodium/bile acid cotransporter), member 1 |
| SLC2A6 | solute carrier family 2 (facilitated glucose transporter), member 6 |
| SNED1 | sushi, nidogen and EGF-like domains 1 |
| SNTB2 | syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2) |
| SNX13 | sorting nexin 13 |
| SPINK2 | serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor) |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STXBP1 | syntaxin binding protein 1 |
| TCEA2 | transcription elongation factor A (SII), 2 |
| THAP10 | THAP domain containing 10 |
| TNFRSF12A | tumor necrosis factor receptor superfamily, member 12A |
| TNFRSF14 | tumor necrosis factor receptor superfamily, member 14 |
| TP63 | tumor protein p63 |
| TPBG | trophoblast glycoprotein |
| TPMT | thiopurine S-methyltransferase |
| TREM1 | triggering receptor expressed on myeloid cells 1 |
| TRH | thyrotropin-releasing hormone |
| TRIM62 | tripartite motif containing 62 |
| TSPAN13 | tetraspanin 13 |
| TUBB2A | tubulin, beta 2A class IIa |
| TUFT1 | tuftelin 1 |
| TULP3 | tubby like protein 3 |
| UBB | ubiquitin B |
| VWA5A | von Willebrand factor A domain containing 5A |
| WIPI1 | WD repeat domain, phosphoinositide interacting 1 |
| ZCCHC24 | zinc finger, CCHC domain containing 24 |
| ZNF219 | zinc finger protein 219 |
| Symbol | Name |
|---|---|
| ACTR8 | ARP8 actin-related protein 8 homolog (yeast) |
| ADI1 | acireductone dioxygenase 1 |
| ANKRD55 | ankyrin repeat domain 55 |
| ANP32A-IT1 | ANP32A intronic transcript 1 |
| ATAD2B | ATPase family, AAA domain containing 2B |
| AVEN | apoptosis, caspase activation inhibitor |
| BPI | bactericidal/permeability-increasing protein |
| C10ORF2 | chromosome 10 open reading frame 2 |
| C11ORF68 | chromosome 11 open reading frame 68 |
| CAPN5 | calpain 5 |
| CBL | Cbl proto-oncogene, E3 ubiquitin protein ligase |
| CBX4 | chromobox homolog 4 |
| CD14 | CD14 molecule |
| CD244 | CD244 molecule, natural killer cell receptor 2B4 |
| CDIP1 | cell death-inducing p53 target 1 |
| CISH | cytokine inducible SH2-containing protein |
| CPNE7 | copine VII |
| CPTP | ceramide-1-phosphate transfer protein |
| CXORF21 | chromosome X open reading frame 21 |
| CYP20A1 | cytochrome P450, family 20, subfamily A, polypeptide 1 |
| DGAT1 | diacylglycerol O-acyltransferase 1 |
| EEF2KMT | eukaryotic elongation factor 2 lysine methyltransferase |
| EMILIN2 | elastin microfibril interfacer 2 |
| ERLIN1 | ER lipid raft associated 1 |
| FGR | FGR proto-oncogene, Src family tyrosine kinase |
| FXN | frataxin |
| GSTCD | glutathione S-transferase, C-terminal domain containing |
| GTF2I | general transcription factor IIi |
| HAMP | hepcidin antimicrobial peptide |
| HMHA1 | histocompatibility (minor) HA-1 |
| HP1BP3 | heterochromatin protein 1, binding protein 3 |
| IFITM3 | interferon induced transmembrane protein 3 |
| IRF8 | interferon regulatory factor 8 |
| ISOC2 | isochorismatase domain containing 2 |
| ITGAL | integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide) |
| ITPKB | inositol-trisphosphate 3-kinase B |
| JUNB | jun B proto-oncogene |
| KCNN2 | potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 2 |
| KLF11 | Kruppel-like factor 11 |
| LANCL2 | LanC lantibiotic synthetase component C-like 2 (bacterial) |
| LILRB4 | leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4 |
| LRFN4 | leucine rich repeat and fibronectin type III domain containing 4 |
| LTBP2 | latent transforming growth factor beta binding protein 2 |
| MCRS1 | microspherule protein 1 |
| MEPCE | methylphosphate capping enzyme |
| METTL8 | methyltransferase like 8 |
| MICAL3 | microtubule associated monooxygenase, calponin and LIM domain containing 3 |
| MON1B | MON1 secretory trafficking family member B |
| MRTO4 | mRNA turnover 4 homolog (S. cerevisiae) |
| MTA2 | metastasis associated 1 family, member 2 |
| MTHFSD | methenyltetrahydrofolate synthetase domain containing |
| MXD3 | MAX dimerization protein 3 |
| NBEAL2 | neurobeachin-like 2 |
| NIP7 | NIP7, nucleolar pre-rRNA processing protein |
| NMI | N-myc (and STAT) interactor |
| NTSR1 | neurotensin receptor 1 (high affinity) |
| NUDT15 | nudix (nucleoside diphosphate linked moiety X)-type motif 15 |
| ODF2 | outer dense fiber of sperm tails 2 |
| OR7E47P | olfactory receptor, family 7, subfamily E, member 47 pseudogene |
| PMCH | pro-melanin-concentrating hormone |
| PMF1 | polyamine-modulated factor 1 |
| POM121 | POM121 transmembrane nucleoporin |
| POMZP3 | POM121 and ZP3 fusion |
| PTGES2 | prostaglandin E synthase 2 |
| PTPRCAP | protein tyrosine phosphatase, receptor type, C-associated protein |
| PUS7 | pseudouridylate synthase 7 (putative) |
| RAC3 | ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) |
| REXO4 | REX4, RNA exonuclease 4 homolog (S. cerevisiae) |
| RFNG | RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase |
| RGS19 | regulator of G-protein signaling 19 |
| RIPK1 | receptor (TNFRSF)-interacting serine-threonine kinase 1 |
| RNH1 | ribonuclease/angiogenin inhibitor 1 |
| RPP40 | ribonuclease P/MRP 40kDa subunit |
| RPS6KA4 | ribosomal protein S6 kinase, 90kDa, polypeptide 4 |
| SCO2 | SCO2 cytochrome c oxidase assembly protein |
| SIGIRR | single immunoglobulin and toll-interleukin 1 receptor (TIR) domain |
| SIL1 | SIL1 nucleotide exchange factor |
| SLC39A4 | solute carrier family 39 (zinc transporter), member 4 |
| SLC43A1 | solute carrier family 43 (amino acid system L transporter), member 1 |
| SMYD5 | SMYD family member 5 |
| SREK1 | splicing regulatory glutamine/lysine-rich protein 1 |
| TCTA | T-cell leukemia translocation altered |
| TERT | telomerase reverse transcriptase |
| TFB2M | transcription factor B2, mitochondrial |
| TIMM50 | translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) |
| TLN1 | talin 1 |
| TRIB3 | tribbles pseudokinase 3 |
| TRPV1 | transient receptor potential cation channel, subfamily V, member 1 |
| TUBA3C | tubulin, alpha 3c |
| UBE2NL | ubiquitin-conjugating enzyme E2N-like (gene/pseudogene) |
| WDR18 | WD repeat domain 18 |
| YIPF1 | Yip1 domain family, member 1 |
| ZNF134 | zinc finger protein 134 |
| ZNF222 | zinc finger protein 222 |
| ZNF322P1 | zinc finger protein 322 pseudogene 1 |
| ZNF493 | zinc finger protein 493 |
| ZNF692 | zinc finger protein 692 |
| ZNF696 | zinc finger protein 696 |
| ZNF747 | zinc finger protein 747 |
| ZNF804A | zinc finger protein 804A |
