| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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199 genes differentially expressed following the trichostatin A-2450 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| AAGAB | alpha- and gamma-adaptin binding protein |
| ACOX1 | acyl-CoA oxidase 1, palmitoyl |
| ACVR1B | activin A receptor, type IB |
| ADGRL2 | adhesion G protein-coupled receptor L2 |
| AFF1 | AF4/FMR2 family, member 1 |
| ALDH8A1 | aldehyde dehydrogenase 8 family, member A1 |
| AP4E1 | adaptor-related protein complex 4, epsilon 1 subunit |
| APBB2 | amyloid beta (A4) precursor protein-binding, family B, member 2 |
| AREG | amphiregulin |
| ATP1B1 | ATPase, Na+/K+ transporting, beta 1 polypeptide |
| ATP2A3 | ATPase, Ca++ transporting, ubiquitous |
| ATP6V1A | ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A |
| B9D1 | B9 protein domain 1 |
| BCL2 | B-cell CLL/lymphoma 2 |
| BEGAIN | brain-enriched guanylate kinase-associated |
| BLVRA | biliverdin reductase A |
| CCR2 | chemokine (C-C motif) receptor 2 |
| CD177 | CD177 molecule |
| CD59 | CD59 molecule, complement regulatory protein |
| CNIH3 | cornichon family AMPA receptor auxiliary protein 3 |
| CPM | carboxypeptidase M |
| CRAT | carnitine O-acetyltransferase |
| CRMP1 | collapsin response mediator protein 1 |
| CXCL6 | chemokine (C-X-C motif) ligand 6 |
| DHRS9 | dehydrogenase/reductase (SDR family) member 9 |
| DHX57 | DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 |
| DKK2 | dickkopf WNT signaling pathway inhibitor 2 |
| DNAJC6 | DnaJ (Hsp40) homolog, subfamily C, member 6 |
| DUSP4 | dual specificity phosphatase 4 |
| ECI2 | enoyl-CoA delta isomerase 2 |
| EFNA4 | ephrin-A4 |
| EPAS1 | endothelial PAS domain protein 1 |
| EPS8L1 | EPS8-like 1 |
| ETV1 | ets variant 1 |
| FAM118A | family with sequence similarity 118, member A |
| FAM153A | family with sequence similarity 153, member A |
| FCMR | Fc fragment of IgM receptor |
| FOXO1 | forkhead box O1 |
| GK | glycerol kinase |
| GM2A | GM2 ganglioside activator |
| GNAQ | guanine nucleotide binding protein (G protein), q polypeptide |
| GNS | glucosamine (N-acetyl)-6-sulfatase |
| GPR65 | G protein-coupled receptor 65 |
| GYPB | glycophorin B (MNS blood group) |
| HMGN5 | high mobility group nucleosome binding domain 5 |
| HOXA1 | homeobox A1 |
| HRH4 | histamine receptor H4 |
| IL36A | interleukin 36, alpha |
| IQCK | IQ motif containing K |
| ITIH4 | inter-alpha-trypsin inhibitor heavy chain family, member 4 |
| JAG1 | jagged 1 |
| KIAA0319L | KIAA0319-like |
| KIAA0513 | KIAA0513 |
| LEF1 | lymphoid enhancer-binding factor 1 |
| LMF1 | lipase maturation factor 1 |
| MAN1A1 | mannosidase, alpha, class 1A, member 1 |
| MARCKS | myristoylated alanine-rich protein kinase C substrate |
| MAX | MYC associated factor X |
| MCAM | melanoma cell adhesion molecule |
| MEF2C | myocyte enhancer factor 2C |
| MNX1 | motor neuron and pancreas homeobox 1 |
| MPZL1 | myelin protein zero-like 1 |
| MTSS1 | metastasis suppressor 1 |
| MTUS1 | microtubule associated tumor suppressor 1 |
| NCAM1 | neural cell adhesion molecule 1 |
| NDRG3 | NDRG family member 3 |
| NOTCH2 | notch 2 |
| OSBPL10 | oxysterol binding protein-like 10 |
| PCDH9 | protocadherin 9 |
| PDE4DIP | phosphodiesterase 4D interacting protein |
| PFKM | phosphofructokinase, muscle |
| PFN2 | profilin 2 |
| PLCL1 | phospholipase C-like 1 |
| PLS1 | plastin 1 |
| POU4F1 | POU class 4 homeobox 1 |
| PRAMEF11 | PRAME family member 11 |
| PTK2B | protein tyrosine kinase 2 beta |
| RAB26 | RAB26, member RAS oncogene family |
| RASAL2 | RAS protein activator like 2 |
| RBFOX2 | RNA binding protein, fox-1 homolog (C. elegans) 2 |
| RBPMS | RNA binding protein with multiple splicing |
| RNF126P1 | ring finger protein 126 pseudogene 1 |
| RNF6 | ring finger protein (C3H2C3 type) 6 |
| ROCK2 | Rho-associated, coiled-coil containing protein kinase 2 |
| RPGRIP1L | RPGRIP1-like |
| SCRN3 | secernin 3 |
| SLC1A3 | solute carrier family 1 (glial high affinity glutamate transporter), member 3 |
| SLC2A8 | solute carrier family 2 (facilitated glucose transporter), member 8 |
| SP110 | SP110 nuclear body protein |
| SPTLC2 | serine palmitoyltransferase, long chain base subunit 2 |
| ST3GAL4 | ST3 beta-galactoside alpha-2,3-sialyltransferase 4 |
| STON1 | stonin 1 |
| TNFAIP1 | tumor necrosis factor, alpha-induced protein 1 (endothelial) |
| TPMT | thiopurine S-methyltransferase |
| TUBB2A | tubulin, beta 2A class IIa |
| ZC2HC1A | zinc finger, C2HC-type containing 1A |
| ZER1 | zyg-11 related, cell cycle regulator |
| ZNF235 | zinc finger protein 235 |
| ZNF280B | zinc finger protein 280B |
| ZNF3 | zinc finger protein 3 |
| Symbol | Name |
|---|---|
| AAAS | achalasia, adrenocortical insufficiency, alacrimia |
| ACADS | acyl-CoA dehydrogenase, C-2 to C-3 short chain |
| ACVR2A | activin A receptor, type IIA |
| ACYP2 | acylphosphatase 2, muscle type |
| ASPSCR1 | alveolar soft part sarcoma chromosome region, candidate 1 |
| ATHL1 | ATH1, acid trehalase-like 1 (yeast) |
| AXIN1 | axin 1 |
| BEST1 | bestrophin 1 |
| BGLAP | bone gamma-carboxyglutamate (gla) protein |
| BTBD18 | BTB (POZ) domain containing 18 |
| C16ORF59 | chromosome 16 open reading frame 59 |
| C1ORF56 | chromosome 1 open reading frame 56 |
| CCRL2 | chemokine (C-C motif) receptor-like 2 |
| CD79A | CD79a molecule, immunoglobulin-associated alpha |
| CDK3 | cyclin-dependent kinase 3 |
| CDKL3 | cyclin-dependent kinase-like 3 |
| CEP170B | centrosomal protein 170B |
| CES3 | carboxylesterase 3 |
| CHML | choroideremia-like (Rab escort protein 2) |
| CLCN5 | chloride channel, voltage-sensitive 5 |
| CLPB | ClpB homolog, mitochondrial AAA ATPase chaperonin |
| CNPY4 | canopy FGF signaling regulator 4 |
| CTSO | cathepsin O |
| DCAF13 | DDB1 and CUL4 associated factor 13 |
| DOK3 | docking protein 3 |
| DVL1 | dishevelled segment polarity protein 1 |
| E4F1 | E4F transcription factor 1 |
| EMID1 | EMI domain containing 1 |
| ERN2 | endoplasmic reticulum to nucleus signaling 2 |
| FBXO46 | F-box protein 46 |
| FBXW4P1 | F-box and WD repeat domain containing 4 pseudogene 1 |
| FGL1 | fibrinogen-like 1 |
| GABRA2 | gamma-aminobutyric acid (GABA) A receptor, alpha 2 |
| GMIP | GEM interacting protein |
| GNRH1 | gonadotropin-releasing hormone 1 (luteinizing-releasing hormone) |
| GPR27 | G protein-coupled receptor 27 |
| GPX2 | glutathione peroxidase 2 |
| GRIP2 | glutamate receptor interacting protein 2 |
| GTPBP6 | GTP binding protein 6 (putative) |
| HAMP | hepcidin antimicrobial peptide |
| HIVEP3 | human immunodeficiency virus type I enhancer binding protein 3 |
| HOXC8 | homeobox C8 |
| HTR2B | 5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled |
| HYAL3 | hyaluronoglucosaminidase 3 |
| IFI6 | interferon, alpha-inducible protein 6 |
| IL1R2 | interleukin 1 receptor, type II |
| IL3RA | interleukin 3 receptor, alpha (low affinity) |
| KLHL28 | kelch-like family member 28 |
| LAIR2 | leukocyte-associated immunoglobulin-like receptor 2 |
| LANCL2 | LanC lantibiotic synthetase component C-like 2 (bacterial) |
| LIMD2 | LIM domain containing 2 |
| LINS | lines homolog (Drosophila) |
| LOC257152 | uncharacterized LOC257152 |
| MRAS | muscle RAS oncogene homolog |
| MRM1 | mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae) |
| NEUROD4 | neuronal differentiation 4 |
| NFS1 | NFS1 cysteine desulfurase |
| NINJ2 | ninjurin 2 |
| NIPAL2 | NIPA-like domain containing 2 |
| NOL6 | nucleolar protein 6 (RNA-associated) |
| NOTCH4 | notch 4 |
| NPFFR1 | neuropeptide FF receptor 1 |
| NXPH4 | neurexophilin 4 |
| OVGP1 | oviductal glycoprotein 1, 120kDa |
| OXCT2 | 3-oxoacid CoA transferase 2 |
| P2RY11 | purinergic receptor P2Y, G-protein coupled, 11 |
| PGGT1B | protein geranylgeranyltransferase type I, beta subunit |
| PIM2 | Pim-2 proto-oncogene, serine/threonine kinase |
| PNOC | prepronociceptin |
| PRSS12 | protease, serine, 12 (neurotrypsin, motopsin) |
| RASSF1 | Ras association (RalGDS/AF-6) domain family member 1 |
| RCAN3 | RCAN family member 3 |
| RNF122 | ring finger protein 122 |
| SCGB2A2 | secretoglobin, family 2A, member 2 |
| SH2D4A | SH2 domain containing 4A |
| SNAPC2 | small nuclear RNA activating complex, polypeptide 2, 45kDa |
| SPAG4 | sperm associated antigen 4 |
| SPATA2L | spermatogenesis associated 2-like |
| SPR | sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase) |
| STAG3L4 | stromal antigen 3-like 4 (pseudogene) |
| STX1A | syntaxin 1A (brain) |
| TERT | telomerase reverse transcriptase |
| TET3 | tet methylcytosine dioxygenase 3 |
| TIGD6 | tigger transposable element derived 6 |
| TMEM206 | transmembrane protein 206 |
| TRANK1 | tetratricopeptide repeat and ankyrin repeat containing 1 |
| TSPAN2 | tetraspanin 2 |
| TTLL1 | tubulin tyrosine ligase-like family member 1 |
| UPK3A | uroplakin 3A |
| USP36 | ubiquitin specific peptidase 36 |
| VEGFC | vascular endothelial growth factor C |
| VWA1 | von Willebrand factor A domain containing 1 |
| ZNF137P | zinc finger protein 137, pseudogene |
| ZNF177 | zinc finger protein 177 |
| ZNF480 | zinc finger protein 480 |
| ZNF668 | zinc finger protein 668 |
| ZNF747 | zinc finger protein 747 |
| ZNF76 | zinc finger protein 76 |
| ZNF804A | zinc finger protein 804A |
