| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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200 genes differentially expressed following the trichostatin A-3643 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ACSBG1 | acyl-CoA synthetase bubblegum family member 1 |
| ADM | adrenomedullin |
| AHNAK2 | AHNAK nucleoprotein 2 |
| AIM1L | absent in melanoma 1-like |
| ANG | angiogenin, ribonuclease, RNase A family, 5 |
| ANGPTL4 | angiopoietin-like 4 |
| AQP1 | aquaporin 1 (Colton blood group) |
| ASAP3 | ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 |
| BAIAP3 | BAI1-associated protein 3 |
| BIRC3 | baculoviral IAP repeat containing 3 |
| CASC1 | cancer susceptibility candidate 1 |
| CCNA1 | cyclin A1 |
| CDK5R2 | cyclin-dependent kinase 5, regulatory subunit 2 (p39) |
| CDKN2D | cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) |
| CELP | carboxyl ester lipase pseudogene |
| CEP112 | centrosomal protein 112kDa |
| CES3 | carboxylesterase 3 |
| CFAP69 | cilia and flagella associated protein 69 |
| CLCN4 | chloride channel, voltage-sensitive 4 |
| CSRP2 | cysteine and glycine-rich protein 2 |
| CXADR | coxsackie virus and adenovirus receptor |
| CYLD | cylindromatosis (turban tumor syndrome) |
| CYP26B1 | cytochrome P450, family 26, subfamily B, polypeptide 1 |
| CYP46A1 | cytochrome P450, family 46, subfamily A, polypeptide 1 |
| DENND3 | DENN/MADD domain containing 3 |
| DHRS2 | dehydrogenase/reductase (SDR family) member 2 |
| DLX2 | distal-less homeobox 2 |
| DNAJC12 | DnaJ (Hsp40) homolog, subfamily C, member 12 |
| EFNA3 | ephrin-A3 |
| EFNB3 | ephrin-B3 |
| ELL2 | elongation factor, RNA polymerase II, 2 |
| EPOR | erythropoietin receptor |
| FAM13A | family with sequence similarity 13, member A |
| FAM46C | family with sequence similarity 46, member C |
| FKBP1B | FK506 binding protein 1B, 12.6 kDa |
| FSCN1 | fascin actin-bundling protein 1 |
| FYN | FYN proto-oncogene, Src family tyrosine kinase |
| GEM | GTP binding protein overexpressed in skeletal muscle |
| GLDC | glycine dehydrogenase (decarboxylating) |
| GLRX | glutaredoxin (thioltransferase) |
| GPR161 | G protein-coupled receptor 161 |
| GRK5 | G protein-coupled receptor kinase 5 |
| HEY1 | hes-related family bHLH transcription factor with YRPW motif 1 |
| HIST1H1T | histone cluster 1, H1t |
| IBA57 | IBA57, iron-sulfur cluster assembly homolog (S. cerevisiae) |
| IFI6 | interferon, alpha-inducible protein 6 |
| ITGA3 | integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) |
| KIF21B | kinesin family member 21B |
| LINC00341 | long intergenic non-protein coding RNA 341 |
| MAF | v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog |
| MAOA | monoamine oxidase A |
| MAPK8IP3 | mitogen-activated protein kinase 8 interacting protein 3 |
| MARK4 | MAP/microtubule affinity-regulating kinase 4 |
| MEF2C | myocyte enhancer factor 2C |
| MKL1 | megakaryoblastic leukemia (translocation) 1 |
| MMD | monocyte to macrophage differentiation-associated |
| NAP1L3 | nucleosome assembly protein 1-like 3 |
| NEAT1 | nuclear paraspeckle assembly transcript 1 (non-protein coding) |
| NES | nestin |
| NIPAL3 | NIPA-like domain containing 3 |
| NME5 | NME/NM23 family member 5 |
| NRTN | neurturin |
| NXN | nucleoredoxin |
| PADI3 | peptidyl arginine deiminase, type III |
| PBXIP1 | pre-B-cell leukemia homeobox interacting protein 1 |
| PIK3CD | phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta |
| PKNOX2 | PBX/knotted 1 homeobox 2 |
| PLAC1 | placenta-specific 1 |
| PMEL | premelanosome protein |
| RASGRP2 | RAS guanyl releasing protein 2 (calcium and DAG-regulated) |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS2 | regulator of G-protein signaling 2 |
| RNASE4 | ribonuclease, RNase A family, 4 |
| RND1 | Rho family GTPase 1 |
| RPL3L | ribosomal protein L3-like |
| RUNDC3B | RUN domain containing 3B |
| SAT1 | spermidine/spermine N1-acetyltransferase 1 |
| SEPP1 | selenoprotein P, plasma, 1 |
| SERPINB5 | serpin peptidase inhibitor, clade B (ovalbumin), member 5 |
| SERPINB9 | serpin peptidase inhibitor, clade B (ovalbumin), member 9 |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SIRT4 | sirtuin 4 |
| SLC17A7 | solute carrier family 17 (vesicular glutamate transporter), member 7 |
| SLC30A3 | solute carrier family 30 (zinc transporter), member 3 |
| SORBS1 | sorbin and SH3 domain containing 1 |
| SPOCK2 | sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2 |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STON1 | stonin 1 |
| SYT11 | synaptotagmin XI |
| TBC1D2 | TBC1 domain family, member 2 |
| TBXA2R | thromboxane A2 receptor |
| THEMIS2 | thymocyte selection associated family member 2 |
| TIMP3 | TIMP metallopeptidase inhibitor 3 |
| TUBA4A | tubulin, alpha 4a |
| TUFT1 | tuftelin 1 |
| ULBP2 | UL16 binding protein 2 |
| WDR19 | WD repeat domain 19 |
| ZCCHC14 | zinc finger, CCHC domain containing 14 |
| ZNF204P | zinc finger protein 204, pseudogene |
| Symbol | Name |
|---|---|
| ACKR3 | atypical chemokine receptor 3 |
| ADGRA3 | adhesion G protein-coupled receptor A3 |
| ADNP | activity-dependent neuroprotector homeobox |
| ASPSCR1 | alveolar soft part sarcoma chromosome region, candidate 1 |
| BATF | basic leucine zipper transcription factor, ATF-like |
| BRINP3 | bone morphogenetic protein/retinoic acid inducible neural-specific 3 |
| CALHM2 | calcium homeostasis modulator 2 |
| CBFA2T3 | core-binding factor, runt domain, alpha subunit 2; translocated to, 3 |
| CCDC94 | coiled-coil domain containing 94 |
| CNNM1 | cyclin and CBS domain divalent metal cation transport mediator 1 |
| COA7 | cytochrome c oxidase assembly factor 7 (putative) |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| CTDSP1 | CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 |
| CYP26A1 | cytochrome P450, family 26, subfamily A, polypeptide 1 |
| DEAF1 | DEAF1 transcription factor |
| DEPDC1 | DEP domain containing 1 |
| DFFB | DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase) |
| DHX35 | DEAH (Asp-Glu-Ala-His) box polypeptide 35 |
| DKK1 | dickkopf WNT signaling pathway inhibitor 1 |
| DSCAM | Down syndrome cell adhesion molecule |
| EGR3 | early growth response 3 |
| ERBB2IP | erbb2 interacting protein |
| ERMAP | erythroblast membrane-associated protein (Scianna blood group) |
| FAM57A | family with sequence similarity 57, member A |
| FJX1 | four jointed box 1 (Drosophila) |
| FOXD1 | forkhead box D1 |
| GMEB1 | glucocorticoid modulatory element binding protein 1 |
| GPR87 | G protein-coupled receptor 87 |
| GTF2I | general transcription factor IIi |
| INHBB | inhibin, beta B |
| IRS1 | insulin receptor substrate 1 |
| IRX5 | iroquois homeobox 5 |
| KAT6B | K(lysine) acetyltransferase 6B |
| KEAP1 | kelch-like ECH-associated protein 1 |
| KIAA0125 | KIAA0125 |
| KLF3 | Kruppel-like factor 3 (basic) |
| KPTN | kaptin (actin binding protein) |
| LANCL2 | LanC lantibiotic synthetase component C-like 2 (bacterial) |
| LINC00115 | long intergenic non-protein coding RNA 115 |
| LY6G5C | lymphocyte antigen 6 complex, locus G5C |
| MCM9 | minichromosome maintenance complex component 9 |
| MCOLN3 | mucolipin 3 |
| MEPCE | methylphosphate capping enzyme |
| METTL8 | methyltransferase like 8 |
| MICALL1 | MICAL-like 1 |
| MSL1 | male-specific lethal 1 homolog (Drosophila) |
| NFKB1 | nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 |
| NPY1R | neuropeptide Y receptor Y1 |
| NUDT15 | nudix (nucleoside diphosphate linked moiety X)-type motif 15 |
| P2RY6 | pyrimidinergic receptor P2Y, G-protein coupled, 6 |
| PHLDA3 | pleckstrin homology-like domain, family A, member 3 |
| PLCB3 | phospholipase C, beta 3 (phosphatidylinositol-specific) |
| POGK | pogo transposable element with KRAB domain |
| PPRC1 | peroxisome proliferator-activated receptor gamma, coactivator-related 1 |
| PRICKLE3 | prickle homolog 3 (Drosophila) |
| PRR15L | proline rich 15-like |
| RARS | arginyl-tRNA synthetase |
| RASGRP1 | RAS guanyl releasing protein 1 (calcium and DAG-regulated) |
| REV1 | REV1, polymerase (DNA directed) |
| RNF146 | ring finger protein 146 |
| RPS6KA4 | ribosomal protein S6 kinase, 90kDa, polypeptide 4 |
| S100A9 | S100 calcium binding protein A9 |
| SARS2 | seryl-tRNA synthetase 2, mitochondrial |
| SBNO2 | strawberry notch homolog 2 (Drosophila) |
| SEMA4A | sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A |
| SEMA4C | sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C |
| SETD1B | SET domain containing 1B |
| SLC27A3 | solute carrier family 27 (fatty acid transporter), member 3 |
| SLC35C1 | solute carrier family 35 (GDP-fucose transporter), member C1 |
| SLC6A14 | solute carrier family 6 (amino acid transporter), member 14 |
| SNHG20 | small nucleolar RNA host gene 20 |
| SP1 | Sp1 transcription factor |
| SREK1 | splicing regulatory glutamine/lysine-rich protein 1 |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| ST6GALNAC2 | ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 |
| STC2 | stanniocalcin 2 |
| SUV420H1 | suppressor of variegation 4-20 homolog 1 (Drosophila) |
| TCTN2 | tectonic family member 2 |
| TRIB3 | tribbles pseudokinase 3 |
| TRIM16 | tripartite motif containing 16 |
| TRIM8 | tripartite motif containing 8 |
| TRPS1 | trichorhinophalangeal syndrome I |
| TSKU | tsukushi, small leucine rich proteoglycan |
| TTC31 | tetratricopeptide repeat domain 31 |
| UBTF | upstream binding transcription factor, RNA polymerase I |
| UBXN8 | UBX domain protein 8 |
| USF2 | upstream transcription factor 2, c-fos interacting |
| VRK2 | vaccinia related kinase 2 |
| WDR82 | WD repeat domain 82 |
| XBP1 | X-box binding protein 1 |
| ZFP69B | ZFP69 zinc finger protein B |
| ZHX2 | zinc fingers and homeoboxes 2 |
| ZIC1 | Zic family member 1 |
| ZMIZ1 | zinc finger, MIZ-type containing 1 |
| ZNF16 | zinc finger protein 16 |
| ZNF329 | zinc finger protein 329 |
| ZNF668 | zinc finger protein 668 |
| ZNF692 | zinc finger protein 692 |
| ZNF787 | zinc finger protein 787 |
| ZNHIT2 | zinc finger, HIT-type containing 2 |
