| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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198 genes differentially expressed following the trichostatin A-3868 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ACSBG1 | acyl-CoA synthetase bubblegum family member 1 |
| ADD3 | adducin 3 (gamma) |
| ADM | adrenomedullin |
| AHNAK2 | AHNAK nucleoprotein 2 |
| ALDOC | aldolase C, fructose-bisphosphate |
| ANGPTL4 | angiopoietin-like 4 |
| ARMCX2 | armadillo repeat containing, X-linked 2 |
| BAIAP3 | BAI1-associated protein 3 |
| BIRC3 | baculoviral IAP repeat containing 3 |
| C19ORF66 | chromosome 19 open reading frame 66 |
| CA5B | carbonic anhydrase VB, mitochondrial |
| CASC1 | cancer susceptibility candidate 1 |
| CCNA1 | cyclin A1 |
| CDH15 | cadherin 15, type 1, M-cadherin (myotubule) |
| CDKN2D | cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) |
| CEP112 | centrosomal protein 112kDa |
| CLGN | calmegin |
| CORO1A | coronin, actin binding protein, 1A |
| CSRP2 | cysteine and glycine-rich protein 2 |
| CXADR | coxsackie virus and adenovirus receptor |
| CYLD | cylindromatosis (turban tumor syndrome) |
| CYP46A1 | cytochrome P450, family 46, subfamily A, polypeptide 1 |
| DHRS2 | dehydrogenase/reductase (SDR family) member 2 |
| DIXDC1 | DIX domain containing 1 |
| DNAJB4 | DnaJ (Hsp40) homolog, subfamily B, member 4 |
| DNAJC12 | DnaJ (Hsp40) homolog, subfamily C, member 12 |
| DPYSL4 | dihydropyrimidinase-like 4 |
| DYRK3 | dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 |
| EFNB3 | ephrin-B3 |
| FAM13A | family with sequence similarity 13, member A |
| FAM49A | family with sequence similarity 49, member A |
| FSCN1 | fascin actin-bundling protein 1 |
| FYN | FYN proto-oncogene, Src family tyrosine kinase |
| GABARAPL1 | GABA(A) receptor-associated protein like 1 |
| GEM | GTP binding protein overexpressed in skeletal muscle |
| GLDC | glycine dehydrogenase (decarboxylating) |
| GLRX | glutaredoxin (thioltransferase) |
| GRK5 | G protein-coupled receptor kinase 5 |
| HBEGF | heparin-binding EGF-like growth factor |
| HEY1 | hes-related family bHLH transcription factor with YRPW motif 1 |
| HOXA1 | homeobox A1 |
| HSPA2 | heat shock 70kDa protein 2 |
| IFIT1 | interferon-induced protein with tetratricopeptide repeats 1 |
| IL21R | interleukin 21 receptor |
| ITM2C | integral membrane protein 2C |
| KIF5C | kinesin family member 5C |
| LINC00341 | long intergenic non-protein coding RNA 341 |
| LSS | lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) |
| MAP1B | microtubule-associated protein 1B |
| MAPRE2 | microtubule-associated protein, RP/EB family, member 2 |
| MAPRE3 | microtubule-associated protein, RP/EB family, member 3 |
| MCOLN1 | mucolipin 1 |
| MMD | monocyte to macrophage differentiation-associated |
| NAP1L3 | nucleosome assembly protein 1-like 3 |
| NEAT1 | nuclear paraspeckle assembly transcript 1 (non-protein coding) |
| NEK1 | NIMA-related kinase 1 |
| NES | nestin |
| NIPAL3 | NIPA-like domain containing 3 |
| NME5 | NME/NM23 family member 5 |
| NXN | nucleoredoxin |
| OASL | 2'-5'-oligoadenylate synthetase-like |
| PADI3 | peptidyl arginine deiminase, type III |
| PAIP2B | poly(A) binding protein interacting protein 2B |
| PIK3CD | phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta |
| PRPH | peripherin |
| PSMB9 | proteasome (prosome, macropain) subunit, beta type, 9 |
| RAI2 | retinoic acid induced 2 |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS2 | regulator of G-protein signaling 2 |
| RNASE4 | ribonuclease, RNase A family, 4 |
| RND1 | Rho family GTPase 1 |
| RPL3L | ribosomal protein L3-like |
| RTN2 | reticulon 2 |
| RUNDC3B | RUN domain containing 3B |
| SAT1 | spermidine/spermine N1-acetyltransferase 1 |
| SEPP1 | selenoprotein P, plasma, 1 |
| SERPINB5 | serpin peptidase inhibitor, clade B (ovalbumin), member 5 |
| SERPINB9 | serpin peptidase inhibitor, clade B (ovalbumin), member 9 |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SIRT4 | sirtuin 4 |
| SLC16A3 | solute carrier family 16 (monocarboxylate transporter), member 3 |
| SLC17A7 | solute carrier family 17 (vesicular glutamate transporter), member 7 |
| SLC30A3 | solute carrier family 30 (zinc transporter), member 3 |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STXBP1 | syntaxin binding protein 1 |
| SYT11 | synaptotagmin XI |
| TBXA2R | thromboxane A2 receptor |
| TMEM45A | transmembrane protein 45A |
| TMOD2 | tropomodulin 2 (neuronal) |
| TNFAIP3 | tumor necrosis factor, alpha-induced protein 3 |
| TXNIP | thioredoxin interacting protein |
| ULBP2 | UL16 binding protein 2 |
| WDR19 | WD repeat domain 19 |
| ZCCHC24 | zinc finger, CCHC domain containing 24 |
| ZDHHC11 | zinc finger, DHHC-type containing 11 |
| ZNF10 | zinc finger protein 10 |
| ZNF204P | zinc finger protein 204, pseudogene |
| Symbol | Name |
|---|---|
| ACKR3 | atypical chemokine receptor 3 |
| ADNP | activity-dependent neuroprotector homeobox |
| ADRA2C | adrenoceptor alpha 2C |
| AMIGO2 | adhesion molecule with Ig-like domain 2 |
| AP5S1 | adaptor-related protein complex 5, sigma 1 subunit |
| ARHGEF5 | Rho guanine nucleotide exchange factor (GEF) 5 |
| B9D2 | B9 protein domain 2 |
| BRINP3 | bone morphogenetic protein/retinoic acid inducible neural-specific 3 |
| C9ORF91 | chromosome 9 open reading frame 91 |
| CALHM2 | calcium homeostasis modulator 2 |
| CBFA2T3 | core-binding factor, runt domain, alpha subunit 2; translocated to, 3 |
| CCDC94 | coiled-coil domain containing 94 |
| CCNO | cyclin O |
| CDK5RAP2 | CDK5 regulatory subunit associated protein 2 |
| COIL | coilin |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| CXCL12 | chemokine (C-X-C motif) ligand 12 |
| CYP20A1 | cytochrome P450, family 20, subfamily A, polypeptide 1 |
| DKK1 | dickkopf WNT signaling pathway inhibitor 1 |
| EFNA1 | ephrin-A1 |
| EGR3 | early growth response 3 |
| EOGT | EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase |
| ERMAP | erythroblast membrane-associated protein (Scianna blood group) |
| FAM57A | family with sequence similarity 57, member A |
| FJX1 | four jointed box 1 (Drosophila) |
| FOSL1 | FOS-like antigen 1 |
| FOXA1 | forkhead box A1 |
| FOXC1 | forkhead box C1 |
| FOXD1 | forkhead box D1 |
| GATA3 | GATA binding protein 3 |
| GPR87 | G protein-coupled receptor 87 |
| GTF2IRD1 | GTF2I repeat domain containing 1 |
| INHBB | inhibin, beta B |
| IRS1 | insulin receptor substrate 1 |
| IRX5 | iroquois homeobox 5 |
| ITPKB | inositol-trisphosphate 3-kinase B |
| KEAP1 | kelch-like ECH-associated protein 1 |
| KIAA0125 | KIAA0125 |
| LMNB1 | lamin B1 |
| LRFN4 | leucine rich repeat and fibronectin type III domain containing 4 |
| LTBR | lymphotoxin beta receptor (TNFR superfamily, member 3) |
| LUC7L2 | LUC7-like 2 (S. cerevisiae) |
| MCM9 | minichromosome maintenance complex component 9 |
| MDM4 | MDM4, p53 regulator |
| MEPCE | methylphosphate capping enzyme |
| MID1IP1 | MID1 interacting protein 1 |
| MSL1 | male-specific lethal 1 homolog (Drosophila) |
| MTHFS | 5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase) |
| MTHFSD | methenyltetrahydrofolate synthetase domain containing |
| MYC | v-myc avian myelocytomatosis viral oncogene homolog |
| NOD1 | nucleotide-binding oligomerization domain containing 1 |
| NRIP1 | nuclear receptor interacting protein 1 |
| NSD1 | nuclear receptor binding SET domain protein 1 |
| NUAK1 | NUAK family, SNF1-like kinase, 1 |
| P2RY6 | pyrimidinergic receptor P2Y, G-protein coupled, 6 |
| POGK | pogo transposable element with KRAB domain |
| PPAN | peter pan homolog (Drosophila) |
| PRR15L | proline rich 15-like |
| RASGRP1 | RAS guanyl releasing protein 1 (calcium and DAG-regulated) |
| RBM23 | RNA binding motif protein 23 |
| RPRD2 | regulation of nuclear pre-mRNA domain containing 2 |
| SFMBT1 | Scm-like with four mbt domains 1 |
| SIDT1 | SID1 transmembrane family, member 1 |
| SLC6A14 | solute carrier family 6 (amino acid transporter), member 14 |
| SMYD5 | SMYD family member 5 |
| SNHG20 | small nucleolar RNA host gene 20 |
| SREK1 | splicing regulatory glutamine/lysine-rich protein 1 |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| STC2 | stanniocalcin 2 |
| SUV39H1 | suppressor of variegation 3-9 homolog 1 (Drosophila) |
| TAOK1 | TAO kinase 1 |
| TBL1XR1 | transducin (beta)-like 1 X-linked receptor 1 |
| TCERG1 | transcription elongation regulator 1 |
| TFAP4 | transcription factor AP-4 (activating enhancer binding protein 4) |
| THBD | thrombomodulin |
| TLK1 | tousled-like kinase 1 |
| TNFRSF1A | tumor necrosis factor receptor superfamily, member 1A |
| TNS3 | tensin 3 |
| TOE1 | target of EGR1, member 1 (nuclear) |
| TRIB3 | tribbles pseudokinase 3 |
| TRIM16 | tripartite motif containing 16 |
| TRIM8 | tripartite motif containing 8 |
| TRPS1 | trichorhinophalangeal syndrome I |
| TSKU | tsukushi, small leucine rich proteoglycan |
| UBTF | upstream binding transcription factor, RNA polymerase I |
| UBXN8 | UBX domain protein 8 |
| XBP1 | X-box binding protein 1 |
| YARS2 | tyrosyl-tRNA synthetase 2, mitochondrial |
| ZBED1 | zinc finger, BED-type containing 1 |
| ZBTB1 | zinc finger and BTB domain containing 1 |
| ZBTB22 | zinc finger and BTB domain containing 22 |
| ZC3H4 | zinc finger CCCH-type containing 4 |
| ZHX2 | zinc fingers and homeoboxes 2 |
| ZIC1 | Zic family member 1 |
| ZMIZ1 | zinc finger, MIZ-type containing 1 |
| ZNF282 | zinc finger protein 282 |
| ZNF532 | zinc finger protein 532 |
| ZNF573 | zinc finger protein 573 |
| ZNF692 | zinc finger protein 692 |
| ZNF747 | zinc finger protein 747 |
