| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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198 genes differentially expressed following the trichostatin A-3872 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABCB4 | ATP-binding cassette, sub-family B (MDR/TAP), member 4 |
| ABCC8 | ATP-binding cassette, sub-family C (CFTR/MRP), member 8 |
| ACRV1 | acrosomal vesicle protein 1 |
| ACTG2 | actin, gamma 2, smooth muscle, enteric |
| AJAP1 | adherens junctions associated protein 1 |
| ARC | activity-regulated cytoskeleton-associated protein |
| ARR3 | arrestin 3, retinal (X-arrestin) |
| ARVCF | armadillo repeat gene deleted in velocardiofacial syndrome |
| BAX | BCL2-associated X protein |
| BRINP2 | bone morphogenetic protein/retinoic acid inducible neural-specific 2 |
| BZRAP1 | benzodiazepine receptor (peripheral) associated protein 1 |
| C4BPA | complement component 4 binding protein, alpha |
| CA5B | carbonic anhydrase VB, mitochondrial |
| CACNA1A | calcium channel, voltage-dependent, P/Q type, alpha 1A subunit |
| CAMK2B | calcium/calmodulin-dependent protein kinase II beta |
| CDC25C | cell division cycle 25C |
| CDC42 | cell division cycle 42 |
| CDRT1 | CMT1A duplicated region transcript 1 |
| CHRNB2 | cholinergic receptor, nicotinic, beta 2 (neuronal) |
| CLCN7 | chloride channel, voltage-sensitive 7 |
| COL16A1 | collagen, type XVI, alpha 1 |
| CREBBP | CREB binding protein |
| CYP2A6 | cytochrome P450, family 2, subfamily A, polypeptide 6 |
| CYP4F12 | cytochrome P450, family 4, subfamily F, polypeptide 12 |
| DGCR14 | DiGeorge syndrome critical region gene 14 |
| DLC1 | DLC1 Rho GTPase activating protein |
| EGR1 | early growth response 1 |
| ELOVL5 | ELOVL fatty acid elongase 5 |
| FAXDC2 | fatty acid hydroxylase domain containing 2 |
| FBXL8 | F-box and leucine-rich repeat protein 8 |
| FXYD5 | FXYD domain containing ion transport regulator 5 |
| GGT1 | gamma-glutamyltransferase 1 |
| GK | glycerol kinase |
| GML | glycosylphosphatidylinositol anchored molecule like |
| GPR137 | G protein-coupled receptor 137 |
| GRIK5 | glutamate receptor, ionotropic, kainate 5 |
| HAND1 | heart and neural crest derivatives expressed 1 |
| HIST1H3B | histone cluster 1, H3b |
| HMGN5 | high mobility group nucleosome binding domain 5 |
| HTR3B | 5-hydroxytryptamine (serotonin) receptor 3B, ionotropic |
| ICOSLG | inducible T-cell co-stimulator ligand |
| IFI27 | interferon, alpha-inducible protein 27 |
| IFI6 | interferon, alpha-inducible protein 6 |
| IFIT1 | interferon-induced protein with tetratricopeptide repeats 1 |
| IFITM1 | interferon induced transmembrane protein 1 |
| ING1 | inhibitor of growth family, member 1 |
| INHBE | inhibin, beta E |
| ITIH2 | inter-alpha-trypsin inhibitor heavy chain 2 |
| ITPK1 | inositol-tetrakisphosphate 1-kinase |
| KIAA1109 | KIAA1109 |
| LAT2 | linker for activation of T cells family, member 2 |
| LDLRAD4 | low density lipoprotein receptor class A domain containing 4 |
| LRP12 | low density lipoprotein receptor-related protein 12 |
| MAGOH2P | mago-nashi homolog 2, pseudogene |
| MBD2 | methyl-CpG binding domain protein 2 |
| MMP13 | matrix metallopeptidase 13 |
| MMP25 | matrix metallopeptidase 25 |
| MS4A1 | membrane-spanning 4-domains, subfamily A, member 1 |
| MYOZ1 | myozenin 1 |
| N4BP2L2-IT2 | N4BPL2 intronic transcript 2 |
| NDUFAF5 | NADH dehydrogenase (ubiquinone) complex I, assembly factor 5 |
| NEUROG2 | neurogenin 2 |
| NPHS1 | nephrosis 1, congenital, Finnish type (nephrin) |
| NPY4R | neuropeptide Y receptor Y4 |
| OBSL1 | obscurin-like 1 |
| PARP3 | poly (ADP-ribose) polymerase family, member 3 |
| PARVA | parvin, alpha |
| PDE10A | phosphodiesterase 10A |
| PDPN | podoplanin |
| PIP5K1A | phosphatidylinositol-4-phosphate 5-kinase, type I, alpha |
| PKP2 | plakophilin 2 |
| PLEKHH3 | pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 |
| PPP3R1 | protein phosphatase 3, regulatory subunit B, alpha |
| PSG6 | pregnancy specific beta-1-glycoprotein 6 |
| RAB40C | RAB40C, member RAS oncogene family |
| RB1 | retinoblastoma 1 |
| RBM5 | RNA binding motif protein 5 |
| RECQL5 | RecQ protein-like 5 |
| RPS6KA2 | ribosomal protein S6 kinase, 90kDa, polypeptide 2 |
| RUSC2 | RUN and SH3 domain containing 2 |
| SATB1 | SATB homeobox 1 |
| SEL1L | sel-1 suppressor of lin-12-like (C. elegans) |
| SLC12A4 | solute carrier family 12 (potassium/chloride transporter), member 4 |
| SLCO1A2 | solute carrier organic anion transporter family, member 1A2 |
| SP100 | SP100 nuclear antigen |
| SPTBN5 | spectrin, beta, non-erythrocytic 5 |
| SSTR1 | somatostatin receptor 1 |
| SSX3 | synovial sarcoma, X breakpoint 3 |
| SUN1 | Sad1 and UNC84 domain containing 1 |
| TAOK2 | TAO kinase 2 |
| TBXA2R | thromboxane A2 receptor |
| TEF | thyrotrophic embryonic factor |
| TERT | telomerase reverse transcriptase |
| TJAP1 | tight junction associated protein 1 (peripheral) |
| TPSG1 | tryptase gamma 1 |
| TRIB2 | tribbles pseudokinase 2 |
| TRPV1 | transient receptor potential cation channel, subfamily V, member 1 |
| TTC39A | tetratricopeptide repeat domain 39A |
| YY1 | YY1 transcription factor |
| ZNF230 | zinc finger protein 230 |
| Symbol | Name |
|---|---|
| A1CF | APOBEC1 complementation factor |
| ACAD10 | acyl-CoA dehydrogenase family, member 10 |
| ACBD4 | acyl-CoA binding domain containing 4 |
| AFAP1 | actin filament associated protein 1 |
| AGMAT | agmatine ureohydrolase (agmatinase) |
| ANP32A-IT1 | ANP32A intronic transcript 1 |
| B3GNT3 | UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 |
| C17ORF80 | chromosome 17 open reading frame 80 |
| C2ORF27A | chromosome 2 open reading frame 27A |
| C3 | complement component 3 |
| C4ORF29 | chromosome 4 open reading frame 29 |
| CCDC132 | coiled-coil domain containing 132 |
| CCDC64 | coiled-coil domain containing 64 |
| CCNK | cyclin K |
| CD3D | CD3d molecule, delta (CD3-TCR complex) |
| CD83 | CD83 molecule |
| CDC42EP1 | CDC42 effector protein (Rho GTPase binding) 1 |
| CDK6 | cyclin-dependent kinase 6 |
| CES3 | carboxylesterase 3 |
| CLCN2 | chloride channel, voltage-sensitive 2 |
| CLSPN | claspin |
| CSF1R | colony stimulating factor 1 receptor |
| CTC1 | CTS telomere maintenance complex component 1 |
| CYP17A1 | cytochrome P450, family 17, subfamily A, polypeptide 1 |
| DGAT1 | diacylglycerol O-acyltransferase 1 |
| DNAJC28 | DnaJ (Hsp40) homolog, subfamily C, member 28 |
| DPY19L1P1 | DPY19L1 pseudogene 1 |
| DRD1 | dopamine receptor D1 |
| ERCC2 | excision repair cross-complementation group 2 |
| ERCC6 | excision repair cross-complementation group 6 |
| ERN2 | endoplasmic reticulum to nucleus signaling 2 |
| ERO1L | ERO1-like (S. cerevisiae) |
| ETAA1 | Ewing tumor-associated antigen 1 |
| FAM86C1 | family with sequence similarity 86, member C1 |
| FARP2 | FERM, RhoGEF and pleckstrin domain protein 2 |
| FKRP | fukutin related protein |
| FLCN | folliculin |
| FLJ11710 | uncharacterized protein FLJ11710 |
| FMOD | fibromodulin |
| GCNT2 | glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) |
| GFI1 | growth factor independent 1 transcription repressor |
| GID4 | GID complex subunit 4 |
| GLB1L | galactosidase, beta 1-like |
| GRTP1 | growth hormone regulated TBC protein 1 |
| GUSBP3 | glucuronidase, beta pseudogene 3 |
| HIVEP3 | human immunodeficiency virus type I enhancer binding protein 3 |
| IL12RB1 | interleukin 12 receptor, beta 1 |
| KDM5C | lysine (K)-specific demethylase 5C |
| KLF3 | Kruppel-like factor 3 (basic) |
| KRI1 | KRI1 homolog (S. cerevisiae) |
| KRT13 | keratin 13, type I |
| LMBR1L | limb development membrane protein 1-like |
| LRRC37A3 | leucine rich repeat containing 37, member A3 |
| LYL1 | lymphoblastic leukemia associated hematopoiesis regulator 1 |
| MAOB | monoamine oxidase B |
| MCOLN1 | mucolipin 1 |
| MMP17 | matrix metallopeptidase 17 (membrane-inserted) |
| MUC3A | mucin 3A, cell surface associated |
| NDUFAF7 | NADH dehydrogenase (ubiquinone) complex I, assembly factor 7 |
| NOL10 | nucleolar protein 10 |
| OR7E156P | olfactory receptor, family 7, subfamily E, member 156 pseudogene |
| PCDHGA8 | protocadherin gamma subfamily A, 8 |
| PLA2G3 | phospholipase A2, group III |
| PLD2 | phospholipase D2 |
| PLEKHF1 | pleckstrin homology domain containing, family F (with FYVE domain) member 1 |
| PODNL1 | podocan-like 1 |
| POM121 | POM121 transmembrane nucleoporin |
| PRRG4 | proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) |
| PTTG3P | pituitary tumor-transforming 3, pseudogene |
| RALGPS2 | Ral GEF with PH domain and SH3 binding motif 2 |
| REPS2 | RALBP1 associated Eps domain containing 2 |
| SCN1B | sodium channel, voltage gated, type I beta subunit |
| SCRN3 | secernin 3 |
| SIGLEC15 | sialic acid binding Ig-like lectin 15 |
| SIX1 | SIX homeobox 1 |
| SLC2A11 | solute carrier family 2 (facilitated glucose transporter), member 11 |
| SLC44A1 | solute carrier family 44 (choline transporter), member 1 |
| SP1 | Sp1 transcription factor |
| STON1 | stonin 1 |
| TBC1D19 | TBC1 domain family, member 19 |
| TBC1D2 | TBC1 domain family, member 2 |
| TEP1 | telomerase-associated protein 1 |
| TFAP4 | transcription factor AP-4 (activating enhancer binding protein 4) |
| TH | tyrosine hydroxylase |
| TLR2 | toll-like receptor 2 |
| TMEM121 | transmembrane protein 121 |
| TMPRSS3 | transmembrane protease, serine 3 |
| TOM1 | target of myb1 (chicken) |
| TTLL1 | tubulin tyrosine ligase-like family member 1 |
| TUBA3C | tubulin, alpha 3c |
| USP6NL | USP6 N-terminal like |
| WLS | wntless Wnt ligand secretion mediator |
| ZBTB22 | zinc finger and BTB domain containing 22 |
| ZBTB48 | zinc finger and BTB domain containing 48 |
| ZNF350 | zinc finger protein 350 |
| ZNF446 | zinc finger protein 446 |
| ZNF669 | zinc finger protein 669 |
| ZNF76 | zinc finger protein 76 |
