| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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199 genes differentially expressed following the trichostatin A-4112 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ACSBG1 | acyl-CoA synthetase bubblegum family member 1 |
| ADD3 | adducin 3 (gamma) |
| ADM | adrenomedullin |
| ADRB2 | adrenoceptor beta 2, surface |
| AHNAK2 | AHNAK nucleoprotein 2 |
| AKAP12 | A kinase (PRKA) anchor protein 12 |
| ARMCX2 | armadillo repeat containing, X-linked 2 |
| BAIAP3 | BAI1-associated protein 3 |
| CA5B | carbonic anhydrase VB, mitochondrial |
| CASC1 | cancer susceptibility candidate 1 |
| CCNA1 | cyclin A1 |
| CDC42EP3 | CDC42 effector protein (Rho GTPase binding) 3 |
| CDKN2D | cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) |
| CEP112 | centrosomal protein 112kDa |
| CLGN | calmegin |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CSRP2 | cysteine and glycine-rich protein 2 |
| CTGF | connective tissue growth factor |
| CXADR | coxsackie virus and adenovirus receptor |
| CYLD | cylindromatosis (turban tumor syndrome) |
| CYP46A1 | cytochrome P450, family 46, subfamily A, polypeptide 1 |
| DHRS2 | dehydrogenase/reductase (SDR family) member 2 |
| DIXDC1 | DIX domain containing 1 |
| DLX2 | distal-less homeobox 2 |
| DNAJC12 | DnaJ (Hsp40) homolog, subfamily C, member 12 |
| DNAJC6 | DnaJ (Hsp40) homolog, subfamily C, member 6 |
| DPYSL4 | dihydropyrimidinase-like 4 |
| EFNB3 | ephrin-B3 |
| ELOVL4 | ELOVL fatty acid elongase 4 |
| EPOR | erythropoietin receptor |
| FAM13A | family with sequence similarity 13, member A |
| FAM49A | family with sequence similarity 49, member A |
| FKBP1B | FK506 binding protein 1B, 12.6 kDa |
| FSCN1 | fascin actin-bundling protein 1 |
| FYN | FYN proto-oncogene, Src family tyrosine kinase |
| GEM | GTP binding protein overexpressed in skeletal muscle |
| GFPT2 | glutamine-fructose-6-phosphate transaminase 2 |
| GLDC | glycine dehydrogenase (decarboxylating) |
| GLRX | glutaredoxin (thioltransferase) |
| GRK5 | G protein-coupled receptor kinase 5 |
| HEY1 | hes-related family bHLH transcription factor with YRPW motif 1 |
| HOXA1 | homeobox A1 |
| IFIT1 | interferon-induced protein with tetratricopeptide repeats 1 |
| IL1RAP | interleukin 1 receptor accessory protein |
| KIF5C | kinesin family member 5C |
| KIFAP3 | kinesin-associated protein 3 |
| LIMCH1 | LIM and calponin homology domains 1 |
| LINC00341 | long intergenic non-protein coding RNA 341 |
| MAP1B | microtubule-associated protein 1B |
| MAPRE2 | microtubule-associated protein, RP/EB family, member 2 |
| MAST3 | microtubule associated serine/threonine kinase 3 |
| MLF1 | myeloid leukemia factor 1 |
| MMD | monocyte to macrophage differentiation-associated |
| MUC3B | mucin 3B, cell surface associated |
| NAP1L3 | nucleosome assembly protein 1-like 3 |
| NPC1 | Niemann-Pick disease, type C1 |
| NRTN | neurturin |
| NXN | nucleoredoxin |
| PADI3 | peptidyl arginine deiminase, type III |
| PBXIP1 | pre-B-cell leukemia homeobox interacting protein 1 |
| PDE4DIP | phosphodiesterase 4D interacting protein |
| PIK3CD | phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta |
| PKNOX2 | PBX/knotted 1 homeobox 2 |
| PLLP | plasmolipin |
| PRPH | peripherin |
| PSMB9 | proteasome (prosome, macropain) subunit, beta type, 9 |
| RALGPS1 | Ral GEF with PH domain and SH3 binding motif 1 |
| RGCC | regulator of cell cycle |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS2 | regulator of G-protein signaling 2 |
| RNASE4 | ribonuclease, RNase A family, 4 |
| RND1 | Rho family GTPase 1 |
| RPL3L | ribosomal protein L3-like |
| RUNDC3B | RUN domain containing 3B |
| SAT1 | spermidine/spermine N1-acetyltransferase 1 |
| SEPP1 | selenoprotein P, plasma, 1 |
| SERPINB5 | serpin peptidase inhibitor, clade B (ovalbumin), member 5 |
| SERPINB9 | serpin peptidase inhibitor, clade B (ovalbumin), member 9 |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SIRT4 | sirtuin 4 |
| SLC17A7 | solute carrier family 17 (vesicular glutamate transporter), member 7 |
| SLC1A1 | solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 |
| SORBS1 | sorbin and SH3 domain containing 1 |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STXBP1 | syntaxin binding protein 1 |
| SYT11 | synaptotagmin XI |
| TBXA2R | thromboxane A2 receptor |
| TUFT1 | tuftelin 1 |
| USP2 | ubiquitin specific peptidase 2 |
| VWA5A | von Willebrand factor A domain containing 5A |
| WDR19 | WD repeat domain 19 |
| WDR47 | WD repeat domain 47 |
| WIPI1 | WD repeat domain, phosphoinositide interacting 1 |
| ZBTB18 | zinc finger and BTB domain containing 18 |
| ZCCHC24 | zinc finger, CCHC domain containing 24 |
| ZDHHC11 | zinc finger, DHHC-type containing 11 |
| ZNF10 | zinc finger protein 10 |
| ZNF204P | zinc finger protein 204, pseudogene |
| Symbol | Name |
|---|---|
| ACKR3 | atypical chemokine receptor 3 |
| ADGRA3 | adhesion G protein-coupled receptor A3 |
| ADNP | activity-dependent neuroprotector homeobox |
| ADRA2C | adrenoceptor alpha 2C |
| AKAP8 | A kinase (PRKA) anchor protein 8 |
| ALOX12P2 | arachidonate 12-lipoxygenase pseudogene 2 |
| AP5S1 | adaptor-related protein complex 5, sigma 1 subunit |
| BANP | BTG3 associated nuclear protein |
| BATF | basic leucine zipper transcription factor, ATF-like |
| BCAR3 | breast cancer anti-estrogen resistance 3 |
| BRINP3 | bone morphogenetic protein/retinoic acid inducible neural-specific 3 |
| C9ORF91 | chromosome 9 open reading frame 91 |
| CALHM2 | calcium homeostasis modulator 2 |
| CBFA2T3 | core-binding factor, runt domain, alpha subunit 2; translocated to, 3 |
| CCDC94 | coiled-coil domain containing 94 |
| CCND1 | cyclin D1 |
| CHKB | choline kinase beta |
| CLCF1 | cardiotrophin-like cytokine factor 1 |
| COIL | coilin |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| DKK1 | dickkopf WNT signaling pathway inhibitor 1 |
| EFNA1 | ephrin-A1 |
| EGR3 | early growth response 3 |
| FAM57A | family with sequence similarity 57, member A |
| FJX1 | four jointed box 1 (Drosophila) |
| FKBP10 | FK506 binding protein 10, 65 kDa |
| FOXA1 | forkhead box A1 |
| GABPB1 | GA binding protein transcription factor, beta subunit 1 |
| GMEB1 | glucocorticoid modulatory element binding protein 1 |
| GPR87 | G protein-coupled receptor 87 |
| GTF2I | general transcription factor IIi |
| H2AFY2 | H2A histone family, member Y2 |
| HIRIP3 | HIRA interacting protein 3 |
| IGFBP4 | insulin-like growth factor binding protein 4 |
| INHBB | inhibin, beta B |
| IRS1 | insulin receptor substrate 1 |
| IRX5 | iroquois homeobox 5 |
| ITPKB | inositol-trisphosphate 3-kinase B |
| KAT2A | K(lysine) acetyltransferase 2A |
| KCNN4 | potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 4 |
| KEAP1 | kelch-like ECH-associated protein 1 |
| KIAA0125 | KIAA0125 |
| LMNB1 | lamin B1 |
| LRFN4 | leucine rich repeat and fibronectin type III domain containing 4 |
| LRRC41 | leucine rich repeat containing 41 |
| LY6G5C | lymphocyte antigen 6 complex, locus G5C |
| MED15 | mediator complex subunit 15 |
| MEPCE | methylphosphate capping enzyme |
| METTL8 | methyltransferase like 8 |
| MRM1 | mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae) |
| MSL1 | male-specific lethal 1 homolog (Drosophila) |
| MYC | v-myc avian myelocytomatosis viral oncogene homolog |
| NARFL | nuclear prelamin A recognition factor-like |
| NFIC | nuclear factor I/C (CCAAT-binding transcription factor) |
| NRIP1 | nuclear receptor interacting protein 1 |
| OSMR | oncostatin M receptor |
| P2RY6 | pyrimidinergic receptor P2Y, G-protein coupled, 6 |
| PAGR1 | PAXIP1 associated glutamate-rich protein 1 |
| PHLDA3 | pleckstrin homology-like domain, family A, member 3 |
| PLEKHM2 | pleckstrin homology domain containing, family M (with RUN domain) member 2 |
| POGK | pogo transposable element with KRAB domain |
| PRR15L | proline rich 15-like |
| RASGRP1 | RAS guanyl releasing protein 1 (calcium and DAG-regulated) |
| RBM23 | RNA binding motif protein 23 |
| SEMA4C | sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C |
| SETD1B | SET domain containing 1B |
| SFMBT1 | Scm-like with four mbt domains 1 |
| SIDT1 | SID1 transmembrane family, member 1 |
| SLC29A2 | solute carrier family 29 (equilibrative nucleoside transporter), member 2 |
| SMAGP | small cell adhesion glycoprotein |
| SMG9 | SMG9 nonsense mediated mRNA decay factor |
| SREK1 | splicing regulatory glutamine/lysine-rich protein 1 |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| ST6GALNAC2 | ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 |
| STC2 | stanniocalcin 2 |
| TNFRSF1A | tumor necrosis factor receptor superfamily, member 1A |
| TRIB3 | tribbles pseudokinase 3 |
| TRIM16 | tripartite motif containing 16 |
| TRIM8 | tripartite motif containing 8 |
| TRMT2A | tRNA methyltransferase 2 homolog A (S. cerevisiae) |
| TRPS1 | trichorhinophalangeal syndrome I |
| TSKU | tsukushi, small leucine rich proteoglycan |
| UBL4A | ubiquitin-like 4A |
| UBTF | upstream binding transcription factor, RNA polymerase I |
| WDR74 | WD repeat domain 74 |
| XBP1 | X-box binding protein 1 |
| YAP1 | Yes-associated protein 1 |
| ZBED1 | zinc finger, BED-type containing 1 |
| ZFHX3 | zinc finger homeobox 3 |
| ZFP36L2 | ZFP36 ring finger protein-like 2 |
| ZHX2 | zinc fingers and homeoboxes 2 |
| ZIC1 | Zic family member 1 |
| ZMIZ1 | zinc finger, MIZ-type containing 1 |
| ZNF254 | zinc finger protein 254 |
| ZNF586 | zinc finger protein 586 |
| ZNF668 | zinc finger protein 668 |
| ZNF672 | zinc finger protein 672 |
| ZNF692 | zinc finger protein 692 |
| ZNF787 | zinc finger protein 787 |
| ZNHIT2 | zinc finger, HIT-type containing 2 |
