| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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199 genes differentially expressed following the trichostatin A-4184 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABAT | 4-aminobutyrate aminotransferase |
| ABCG1 | ATP-binding cassette, sub-family G (WHITE), member 1 |
| AGTR1 | angiotensin II receptor, type 1 |
| AQP3 | aquaporin 3 (Gill blood group) |
| ARG2 | arginase 2 |
| ARNTL | aryl hydrocarbon receptor nuclear translocator-like |
| ASMTL | acetylserotonin O-methyltransferase-like |
| ATP7A | ATPase, Cu++ transporting, alpha polypeptide |
| AVPI1 | arginine vasopressin-induced 1 |
| BAIAP2 | BAI1-associated protein 2 |
| BAMBI | BMP and activin membrane-bound inhibitor |
| BBC3 | BCL2 binding component 3 |
| BCL6 | B-cell CLL/lymphoma 6 |
| CA5B | carbonic anhydrase VB, mitochondrial |
| CDC14B | cell division cycle 14B |
| CDC42EP3 | CDC42 effector protein (Rho GTPase binding) 3 |
| CDKN1A | cyclin-dependent kinase inhibitor 1A (p21, Cip1) |
| CFAP69 | cilia and flagella associated protein 69 |
| CHCHD7 | coiled-coil-helix-coiled-coil-helix domain containing 7 |
| COBL | cordon-bleu WH2 repeat protein |
| COL21A1 | collagen, type XXI, alpha 1 |
| CORO1A | coronin, actin binding protein, 1A |
| CPM | carboxypeptidase M |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CTGF | connective tissue growth factor |
| CTH | cystathionine gamma-lyase |
| CXADR | coxsackie virus and adenovirus receptor |
| CXCR4 | chemokine (C-X-C motif) receptor 4 |
| DHRS2 | dehydrogenase/reductase (SDR family) member 2 |
| DNAJC12 | DnaJ (Hsp40) homolog, subfamily C, member 12 |
| DNAJC6 | DnaJ (Hsp40) homolog, subfamily C, member 6 |
| DOPEY1 | dopey family member 1 |
| DUSP1 | dual specificity phosphatase 1 |
| DUSP10 | dual specificity phosphatase 10 |
| ELOVL4 | ELOVL fatty acid elongase 4 |
| ENOX1 | ecto-NOX disulfide-thiol exchanger 1 |
| EPHB3 | EPH receptor B3 |
| FABP4 | fatty acid binding protein 4, adipocyte |
| FAM69A | family with sequence similarity 69, member A |
| FEZ1 | fasciculation and elongation protein zeta 1 (zygin I) |
| HERPUD1 | homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 |
| HOXA1 | homeobox A1 |
| IRF6 | interferon regulatory factor 6 |
| KCNJ2 | potassium channel, inwardly rectifying subfamily J, member 2 |
| KCNJ5 | potassium channel, inwardly rectifying subfamily J, member 5 |
| KIF5C | kinesin family member 5C |
| LIFR | leukemia inhibitory factor receptor alpha |
| LINC00312 | long intergenic non-protein coding RNA 312 |
| LINC00341 | long intergenic non-protein coding RNA 341 |
| LMCD1 | LIM and cysteine-rich domains 1 |
| LPPR4 | lipid phosphate phosphatase-related protein type 4 |
| MAK | male germ cell-associated kinase |
| MAP2K3 | mitogen-activated protein kinase kinase 3 |
| MAP3K13 | mitogen-activated protein kinase kinase kinase 13 |
| MAPRE2 | microtubule-associated protein, RP/EB family, member 2 |
| MERTK | MER proto-oncogene, tyrosine kinase |
| MLF1 | myeloid leukemia factor 1 |
| MLLT3 | myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 |
| MMP1 | matrix metallopeptidase 1 |
| MMP3 | matrix metallopeptidase 3 |
| NBEA | neurobeachin |
| NEAT1 | nuclear paraspeckle assembly transcript 1 (non-protein coding) |
| NEDD9 | neural precursor cell expressed, developmentally down-regulated 9 |
| NOL4 | nucleolar protein 4 |
| NR4A2 | nuclear receptor subfamily 4, group A, member 2 |
| NR4A3 | nuclear receptor subfamily 4, group A, member 3 |
| OSR2 | odd-skipped related transciption factor 2 |
| PCDH17 | protocadherin 17 |
| PCDH9 | protocadherin 9 |
| PDE4DIP | phosphodiesterase 4D interacting protein |
| PDGFRA | platelet-derived growth factor receptor, alpha polypeptide |
| PELI2 | pellino E3 ubiquitin protein ligase family member 2 |
| PLA2G4A | phospholipase A2, group IVA (cytosolic, calcium-dependent) |
| PRKAR2B | protein kinase, cAMP-dependent, regulatory, type II, beta |
| PTGER4 | prostaglandin E receptor 4 (subtype EP4) |
| RAB11FIP1 | RAB11 family interacting protein 1 (class I) |
| RAI2 | retinoic acid induced 2 |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS4 | regulator of G-protein signaling 4 |
| RND1 | Rho family GTPase 1 |
| RPS6KA2 | ribosomal protein S6 kinase, 90kDa, polypeptide 2 |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SHROOM2 | shroom family member 2 |
| SIRT4 | sirtuin 4 |
| SLC9A7 | solute carrier family 9, subfamily A (NHE7, cation proton antiporter 7), member 7 |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STC1 | stanniocalcin 1 |
| STOM | stomatin |
| STON1 | stonin 1 |
| SYT1 | synaptotagmin I |
| SYT11 | synaptotagmin XI |
| TESK2 | testis-specific kinase 2 |
| TNFAIP3 | tumor necrosis factor, alpha-induced protein 3 |
| TNIK | TRAF2 and NCK interacting kinase |
| TRIM36 | tripartite motif containing 36 |
| TUBB2B | tubulin, beta 2B class IIb |
| TUFT1 | tuftelin 1 |
| VWA5A | von Willebrand factor A domain containing 5A |
| Symbol | Name |
|---|---|
| ADNP | activity-dependent neuroprotector homeobox |
| AKAP8 | A kinase (PRKA) anchor protein 8 |
| AP5S1 | adaptor-related protein complex 5, sigma 1 subunit |
| APOL6 | apolipoprotein L, 6 |
| ARHGEF5 | Rho guanine nucleotide exchange factor (GEF) 5 |
| ARSJ | arylsulfatase family, member J |
| BCAR3 | breast cancer anti-estrogen resistance 3 |
| BCL7A | B-cell CLL/lymphoma 7A |
| C19ORF40 | chromosome 19 open reading frame 40 |
| C7ORF49 | chromosome 7 open reading frame 49 |
| C9ORF40 | chromosome 9 open reading frame 40 |
| CABYR | calcium binding tyrosine-(Y)-phosphorylation regulated |
| CASD1 | CAS1 domain containing 1 |
| CBR3 | carbonyl reductase 3 |
| CBX8 | chromobox homolog 8 |
| CCNT1 | cyclin T1 |
| CDT1 | chromatin licensing and DNA replication factor 1 |
| CLCF1 | cardiotrophin-like cytokine factor 1 |
| COG7 | component of oligomeric golgi complex 7 |
| COIL | coilin |
| CTDSP1 | CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 |
| CUL1 | cullin 1 |
| DEPDC1 | DEP domain containing 1 |
| ERN2 | endoplasmic reticulum to nucleus signaling 2 |
| FADD | Fas (TNFRSF6)-associated via death domain |
| FJX1 | four jointed box 1 (Drosophila) |
| FOSL1 | FOS-like antigen 1 |
| FOXA1 | forkhead box A1 |
| FST | follistatin |
| FSTL3 | follistatin-like 3 (secreted glycoprotein) |
| FZD8 | frizzled class receptor 8 |
| GBX2 | gastrulation brain homeobox 2 |
| GRPR | gastrin-releasing peptide receptor |
| GTF2A1 | general transcription factor IIA, 1, 19/37kDa |
| H2AFY2 | H2A histone family, member Y2 |
| HAS2 | hyaluronan synthase 2 |
| HMGA2 | high mobility group AT-hook 2 |
| IFIT2 | interferon-induced protein with tetratricopeptide repeats 2 |
| INHBB | inhibin, beta B |
| INPP5E | inositol polyphosphate-5-phosphatase, 72 kDa |
| KAT6B | K(lysine) acetyltransferase 6B |
| KDM4D | lysine (K)-specific demethylase 4D |
| KEAP1 | kelch-like ECH-associated protein 1 |
| KIRREL | kin of IRRE like (Drosophila) |
| LIF | leukemia inhibitory factor |
| LIME1 | Lck interacting transmembrane adaptor 1 |
| LMNB1 | lamin B1 |
| LPAR1 | lysophosphatidic acid receptor 1 |
| LRFN4 | leucine rich repeat and fibronectin type III domain containing 4 |
| LRRC41 | leucine rich repeat containing 41 |
| LY6G5C | lymphocyte antigen 6 complex, locus G5C |
| MAP3K6 | mitogen-activated protein kinase kinase kinase 6 |
| MEPCE | methylphosphate capping enzyme |
| MFSD5 | major facilitator superfamily domain containing 5 |
| MRPS2 | mitochondrial ribosomal protein S2 |
| MSL1 | male-specific lethal 1 homolog (Drosophila) |
| NINJ1 | ninjurin 1 |
| NR1H2 | nuclear receptor subfamily 1, group H, member 2 |
| OR2F1 | olfactory receptor, family 2, subfamily F, member 1 (gene/pseudogene) |
| PARP4 | poly (ADP-ribose) polymerase family, member 4 |
| PMM2 | phosphomannomutase 2 |
| POGK | pogo transposable element with KRAB domain |
| PPRC1 | peroxisome proliferator-activated receptor gamma, coactivator-related 1 |
| PRB3 | proline-rich protein BstNI subfamily 3 |
| PRCC | papillary renal cell carcinoma (translocation-associated) |
| PXDC1 | PX domain containing 1 |
| RIN2 | Ras and Rab interactor 2 |
| RPRD2 | regulation of nuclear pre-mRNA domain containing 2 |
| SAYSD1 | SAYSVFN motif domain containing 1 |
| SERPINH1 | serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) |
| SETD1B | SET domain containing 1B |
| SH2D4A | SH2 domain containing 4A |
| SIM2 | single-minded family bHLH transcription factor 2 |
| SLC12A8 | solute carrier family 12, member 8 |
| SLITRK5 | SLIT and NTRK-like family, member 5 |
| SMAGP | small cell adhesion glycoprotein |
| SMPDL3A | sphingomyelin phosphodiesterase, acid-like 3A |
| SMYD5 | SMYD family member 5 |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| STBD1 | starch binding domain 1 |
| SUV39H1 | suppressor of variegation 3-9 homolog 1 (Drosophila) |
| TARBP2 | TAR (HIV-1) RNA binding protein 2 |
| TFAP4 | transcription factor AP-4 (activating enhancer binding protein 4) |
| TGFB1I1 | transforming growth factor beta 1 induced transcript 1 |
| TLN1 | talin 1 |
| TMEM39B | transmembrane protein 39B |
| TNFSF13 | tumor necrosis factor (ligand) superfamily, member 13 |
| TRPM2 | transient receptor potential cation channel, subfamily M, member 2 |
| USP21 | ubiquitin specific peptidase 21 |
| VEGFC | vascular endothelial growth factor C |
| WARS2 | tryptophanyl tRNA synthetase 2, mitochondrial |
| WNT7A | wingless-type MMTV integration site family, member 7A |
| XAB2 | XPA binding protein 2 |
| ZBED1 | zinc finger, BED-type containing 1 |
| ZC3H4 | zinc finger CCCH-type containing 4 |
| ZNF165 | zinc finger protein 165 |
| ZNF692 | zinc finger protein 692 |
| ZNF787 | zinc finger protein 787 |
| ZNF804A | zinc finger protein 804A |
| ZSCAN31 | zinc finger and SCAN domain containing 31 |
