| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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200 genes differentially expressed following the trichostatin A-4302 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABAT | 4-aminobutyrate aminotransferase |
| ABCG1 | ATP-binding cassette, sub-family G (WHITE), member 1 |
| ADGRB2 | adhesion G protein-coupled receptor B2 |
| AGTR1 | angiotensin II receptor, type 1 |
| AIM1L | absent in melanoma 1-like |
| AQP3 | aquaporin 3 (Gill blood group) |
| ARG2 | arginase 2 |
| ARNTL | aryl hydrocarbon receptor nuclear translocator-like |
| ASMTL | acetylserotonin O-methyltransferase-like |
| BAIAP2 | BAI1-associated protein 2 |
| BIRC3 | baculoviral IAP repeat containing 3 |
| BMP4 | bone morphogenetic protein 4 |
| BTF3P11 | basic transcription factor 3 pseudogene 11 |
| C5ORF45 | chromosome 5 open reading frame 45 |
| CD47 | CD47 molecule |
| CDC42EP3 | CDC42 effector protein (Rho GTPase binding) 3 |
| CDKN1A | cyclin-dependent kinase inhibitor 1A (p21, Cip1) |
| CLCN6 | chloride channel, voltage-sensitive 6 |
| CLDN8 | claudin 8 |
| CLTCL1 | clathrin, heavy chain-like 1 |
| COBL | cordon-bleu WH2 repeat protein |
| CORO1A | coronin, actin binding protein, 1A |
| CREB3L1 | cAMP responsive element binding protein 3-like 1 |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CRY2 | cryptochrome circadian clock 2 |
| CTGF | connective tissue growth factor |
| CTH | cystathionine gamma-lyase |
| CXCR4 | chemokine (C-X-C motif) receptor 4 |
| CYFIP2 | cytoplasmic FMR1 interacting protein 2 |
| DENND3 | DENN/MADD domain containing 3 |
| DFNB31 | deafness, autosomal recessive 31 |
| DOK4 | docking protein 4 |
| DUSP1 | dual specificity phosphatase 1 |
| ELOVL4 | ELOVL fatty acid elongase 4 |
| F3 | coagulation factor III (thromboplastin, tissue factor) |
| FABP4 | fatty acid binding protein 4, adipocyte |
| FLJ22184 | |
| GFPT2 | glutamine-fructose-6-phosphate transaminase 2 |
| GIT1 | G protein-coupled receptor kinase interacting ArfGAP 1 |
| GLRX | glutaredoxin (thioltransferase) |
| GLS | glutaminase |
| GMPR | guanosine monophosphate reductase |
| GNRH1 | gonadotropin-releasing hormone 1 (luteinizing-releasing hormone) |
| GPRC5B | G protein-coupled receptor, class C, group 5, member B |
| HOXA1 | homeobox A1 |
| IL1RAP | interleukin 1 receptor accessory protein |
| IRF6 | interferon regulatory factor 6 |
| KCNJ2 | potassium channel, inwardly rectifying subfamily J, member 2 |
| KIF13B | kinesin family member 13B |
| KIF5C | kinesin family member 5C |
| LMCD1 | LIM and cysteine-rich domains 1 |
| LPPR4 | lipid phosphate phosphatase-related protein type 4 |
| LSS | lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) |
| LTB4R | leukotriene B4 receptor |
| LUM | lumican |
| MAP1A | microtubule-associated protein 1A |
| MAP2 | microtubule-associated protein 2 |
| MAPRE2 | microtubule-associated protein, RP/EB family, member 2 |
| MARK4 | MAP/microtubule affinity-regulating kinase 4 |
| MERTK | MER proto-oncogene, tyrosine kinase |
| MMP15 | matrix metallopeptidase 15 (membrane-inserted) |
| NOL4 | nucleolar protein 4 |
| PBX2 | pre-B-cell leukemia homeobox 2 |
| PCDH7 | protocadherin 7 |
| PDE3B | phosphodiesterase 3B, cGMP-inhibited |
| PDE4DIP | phosphodiesterase 4D interacting protein |
| PELI2 | pellino E3 ubiquitin protein ligase family member 2 |
| PPL | periplakin |
| PQLC1 | PQ loop repeat containing 1 |
| PRKAR2B | protein kinase, cAMP-dependent, regulatory, type II, beta |
| PRPH | peripherin |
| PSMB9 | proteasome (prosome, macropain) subunit, beta type, 9 |
| RAI2 | retinoic acid induced 2 |
| RGCC | regulator of cell cycle |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS4 | regulator of G-protein signaling 4 |
| RPS6KA2 | ribosomal protein S6 kinase, 90kDa, polypeptide 2 |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SGCD | sarcoglycan, delta (35kDa dystrophin-associated glycoprotein) |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SLC17A7 | solute carrier family 17 (vesicular glutamate transporter), member 7 |
| SORBS1 | sorbin and SH3 domain containing 1 |
| SOSTDC1 | sclerostin domain containing 1 |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STAT4 | signal transducer and activator of transcription 4 |
| STC1 | stanniocalcin 1 |
| SYT1 | synaptotagmin I |
| SYT11 | synaptotagmin XI |
| TAOK3 | TAO kinase 3 |
| TBC1D16 | TBC1 domain family, member 16 |
| TJP3 | tight junction protein 3 |
| TNFSF9 | tumor necrosis factor (ligand) superfamily, member 9 |
| TRAFD1 | TRAF-type zinc finger domain containing 1 |
| TRIM36 | tripartite motif containing 36 |
| TRIM62 | tripartite motif containing 62 |
| TRIM9 | tripartite motif containing 9 |
| TTC21B | tetratricopeptide repeat domain 21B |
| TUBB2B | tubulin, beta 2B class IIb |
| TUFT1 | tuftelin 1 |
| ZFP36 | ZFP36 ring finger protein |
| Symbol | Name |
|---|---|
| ABL1 | ABL proto-oncogene 1, non-receptor tyrosine kinase |
| ADAM15 | ADAM metallopeptidase domain 15 |
| ADNP | activity-dependent neuroprotector homeobox |
| ANKRD36B | ankyrin repeat domain 36B |
| ARHGEF5 | Rho guanine nucleotide exchange factor (GEF) 5 |
| ARSJ | arylsulfatase family, member J |
| BCAR3 | breast cancer anti-estrogen resistance 3 |
| BCAS3 | breast carcinoma amplified sequence 3 |
| CBR3 | carbonyl reductase 3 |
| CCDC15 | coiled-coil domain containing 15 |
| CCDC88A | coiled-coil domain containing 88A |
| CCNT1 | cyclin T1 |
| COA7 | cytochrome c oxidase assembly factor 7 (putative) |
| COL4A3BP | collagen, type IV, alpha 3 (Goodpasture antigen) binding protein |
| CUL1 | cullin 1 |
| DCBLD2 | discoidin, CUB and LCCL domain containing 2 |
| DCTN4 | dynactin 4 (p62) |
| DENND5B | DENN/MADD domain containing 5B |
| DEPDC1 | DEP domain containing 1 |
| DNAJC17 | DnaJ (Hsp40) homolog, subfamily C, member 17 |
| EIF2S3 | eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa |
| ELAVL2 | ELAV like neuron-specific RNA binding protein 2 |
| EXOC5 | exocyst complex component 5 |
| FAM169A | family with sequence similarity 169, member A |
| FJX1 | four jointed box 1 (Drosophila) |
| FNDC3B | fibronectin type III domain containing 3B |
| FZD8 | frizzled class receptor 8 |
| GABPA | GA binding protein transcription factor, alpha subunit 60kDa |
| GABPB1 | GA binding protein transcription factor, beta subunit 1 |
| GATC | glutamyl-tRNA(Gln) amidotransferase, subunit C |
| GBX2 | gastrulation brain homeobox 2 |
| GINS4 | GINS complex subunit 4 (Sld5 homolog) |
| GTF2H3 | general transcription factor IIH, polypeptide 3, 34kDa |
| GUCY1A3 | guanylate cyclase 1, soluble, alpha 3 |
| HAS2 | hyaluronan synthase 2 |
| HIST1H1E | histone cluster 1, H1e |
| HIST1H4C | histone cluster 1, H4c |
| HMGA2 | high mobility group AT-hook 2 |
| INHBB | inhibin, beta B |
| IPP | intracisternal A particle-promoted polypeptide |
| KAT6B | K(lysine) acetyltransferase 6B |
| KCTD15 | potassium channel tetramerization domain containing 15 |
| KEAP1 | kelch-like ECH-associated protein 1 |
| KIRREL | kin of IRRE like (Drosophila) |
| LMNB1 | lamin B1 |
| MEPCE | methylphosphate capping enzyme |
| MIS18BP1 | MIS18 binding protein 1 |
| MPDU1 | mannose-P-dolichol utilization defect 1 |
| MRTO4 | mRNA turnover 4 homolog (S. cerevisiae) |
| MSL1 | male-specific lethal 1 homolog (Drosophila) |
| MTPAP | mitochondrial poly(A) polymerase |
| NAA15 | N(alpha)-acetyltransferase 15, NatA auxiliary subunit |
| NHEJ1 | nonhomologous end-joining factor 1 |
| NIP7 | NIP7, nucleolar pre-rRNA processing protein |
| NR1D2 | nuclear receptor subfamily 1, group D, member 2 |
| NR2C2 | nuclear receptor subfamily 2, group C, member 2 |
| PLEKHA2 | pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 |
| PPP1R9A | protein phosphatase 1, regulatory subunit 9A |
| PPP2R1A | protein phosphatase 2, regulatory subunit A, alpha |
| PRR3 | proline rich 3 |
| PSAT1 | phosphoserine aminotransferase 1 |
| PSMC3 | proteasome (prosome, macropain) 26S subunit, ATPase, 3 |
| PTK6 | protein tyrosine kinase 6 |
| RASSF8 | Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 |
| RBBP5 | retinoblastoma binding protein 5 |
| RBM41 | RNA binding motif protein 41 |
| RBM4B | RNA binding motif protein 4B |
| RIN2 | Ras and Rab interactor 2 |
| RNF146 | ring finger protein 146 |
| RSRC1 | arginine/serine-rich coiled-coil 1 |
| SCRN3 | secernin 3 |
| SCYL2 | SCY1-like 2 (S. cerevisiae) |
| SETD1B | SET domain containing 1B |
| SMG1 | SMG1 phosphatidylinositol 3-kinase-related kinase |
| SNRNP40 | small nuclear ribonucleoprotein 40kDa (U5) |
| SPIN1 | spindlin 1 |
| SPOP | speckle-type POZ protein |
| STT3A | STT3A, subunit of the oligosaccharyltransferase complex (catalytic) |
| SUV420H1 | suppressor of variegation 4-20 homolog 1 (Drosophila) |
| SUZ12P1 | suppressor of zeste 12 homolog pseudogene 1 |
| TBL1XR1 | transducin (beta)-like 1 X-linked receptor 1 |
| TGFBRAP1 | transforming growth factor, beta receptor associated protein 1 |
| TMEM230 | transmembrane protein 230 |
| TNFRSF12A | tumor necrosis factor receptor superfamily, member 12A |
| TOMM22 | translocase of outer mitochondrial membrane 22 homolog (yeast) |
| TRIM16 | tripartite motif containing 16 |
| UBE2M | ubiquitin-conjugating enzyme E2M |
| UTP20 | UTP20, small subunit (SSU) processome component, homolog (yeast) |
| VEGFC | vascular endothelial growth factor C |
| YIPF5 | Yip1 domain family, member 5 |
| ZBTB38 | zinc finger and BTB domain containing 38 |
| ZNF124 | zinc finger protein 124 |
| ZNF148 | zinc finger protein 148 |
| ZNF532 | zinc finger protein 532 |
| ZNF562 | zinc finger protein 562 |
| ZNF652 | zinc finger protein 652 |
| ZNF669 | zinc finger protein 669 |
| ZNF770 | zinc finger protein 770 |
| ZNF91 | zinc finger protein 91 |
| ZWILCH | zwilch kinetochore protein |
