| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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200 genes differentially expressed following the trichostatin A-4344 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABAT | 4-aminobutyrate aminotransferase |
| ABCG1 | ATP-binding cassette, sub-family G (WHITE), member 1 |
| AKAP13 | A kinase (PRKA) anchor protein 13 |
| AKR1C1 | aldo-keto reductase family 1, member C1 |
| AKR1C2 | aldo-keto reductase family 1, member C2 |
| APAF1 | apoptotic peptidase activating factor 1 |
| AQP3 | aquaporin 3 (Gill blood group) |
| ARG2 | arginase 2 |
| ARHGAP26 | Rho GTPase activating protein 26 |
| ASMTL | acetylserotonin O-methyltransferase-like |
| B3GNT4 | UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 |
| BAIAP2 | BAI1-associated protein 2 |
| BAMBI | BMP and activin membrane-bound inhibitor |
| CAMK4 | calcium/calmodulin-dependent protein kinase IV |
| CDC42EP3 | CDC42 effector protein (Rho GTPase binding) 3 |
| CDKN1A | cyclin-dependent kinase inhibitor 1A (p21, Cip1) |
| CFAP69 | cilia and flagella associated protein 69 |
| CLDN17 | claudin 17 |
| CLEC4E | C-type lectin domain family 4, member E |
| CLTCL1 | clathrin, heavy chain-like 1 |
| CORO1A | coronin, actin binding protein, 1A |
| CPM | carboxypeptidase M |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CTGF | connective tissue growth factor |
| DNAJC12 | DnaJ (Hsp40) homolog, subfamily C, member 12 |
| DNAJC6 | DnaJ (Hsp40) homolog, subfamily C, member 6 |
| DPF1 | D4, zinc and double PHD fingers family 1 |
| DPYSL4 | dihydropyrimidinase-like 4 |
| DUSP1 | dual specificity phosphatase 1 |
| DUSP10 | dual specificity phosphatase 10 |
| EFNB2 | ephrin-B2 |
| EGR2 | early growth response 2 |
| EPB41L5 | erythrocyte membrane protein band 4.1 like 5 |
| EPPK1 | epiplakin 1 |
| EXT1 | exostosin glycosyltransferase 1 |
| EZR | ezrin |
| F3 | coagulation factor III (thromboplastin, tissue factor) |
| FABP4 | fatty acid binding protein 4, adipocyte |
| FAM69A | family with sequence similarity 69, member A |
| FGFR1 | fibroblast growth factor receptor 1 |
| FYN | FYN proto-oncogene, Src family tyrosine kinase |
| GMPR | guanosine monophosphate reductase |
| HOXA1 | homeobox A1 |
| IRF6 | interferon regulatory factor 6 |
| KCNH2 | potassium channel, voltage gated eag related subfamily H, member 2 |
| KCNJ2 | potassium channel, inwardly rectifying subfamily J, member 2 |
| KIF5C | kinesin family member 5C |
| KRT86 | keratin 86, type II |
| LAT2 | linker for activation of T cells family, member 2 |
| LPPR4 | lipid phosphate phosphatase-related protein type 4 |
| LYST | lysosomal trafficking regulator |
| MAK | male germ cell-associated kinase |
| MAP1A | microtubule-associated protein 1A |
| MAPT | microtubule-associated protein tau |
| MLLT3 | myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 |
| MMP16 | matrix metallopeptidase 16 (membrane-inserted) |
| NEDD4L | neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase |
| NFASC | neurofascin |
| NFATC1 | nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 |
| NR6A1 | nuclear receptor subfamily 6, group A, member 1 |
| OSR2 | odd-skipped related transciption factor 2 |
| PDE4DIP | phosphodiesterase 4D interacting protein |
| PDGFRA | platelet-derived growth factor receptor, alpha polypeptide |
| PELI2 | pellino E3 ubiquitin protein ligase family member 2 |
| PER1 | period circadian clock 1 |
| PI4K2A | phosphatidylinositol 4-kinase type 2 alpha |
| PIK3CD | phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta |
| PRKAR2B | protein kinase, cAMP-dependent, regulatory, type II, beta |
| PTCH1 | patched 1 |
| RAB11FIP1 | RAB11 family interacting protein 1 (class I) |
| RAPGEF2 | Rap guanine nucleotide exchange factor (GEF) 2 |
| RGCC | regulator of cell cycle |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS4 | regulator of G-protein signaling 4 |
| RIMS3 | regulating synaptic membrane exocytosis 3 |
| RNF24 | ring finger protein 24 |
| RUNDC3B | RUN domain containing 3B |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SGCD | sarcoglycan, delta (35kDa dystrophin-associated glycoprotein) |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SIRT4 | sirtuin 4 |
| SIX3 | SIX homeobox 3 |
| SKI | SKI proto-oncogene |
| SORBS1 | sorbin and SH3 domain containing 1 |
| SQLE | squalene epoxidase |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STC1 | stanniocalcin 1 |
| STOM | stomatin |
| SYT1 | synaptotagmin I |
| SYT11 | synaptotagmin XI |
| TAOK3 | TAO kinase 3 |
| TBC1D2 | TBC1 domain family, member 2 |
| TBPL1 | TBP-like 1 |
| TMEM159 | transmembrane protein 159 |
| TNIK | TRAF2 and NCK interacting kinase |
| TRIM9 | tripartite motif containing 9 |
| TUBB2B | tubulin, beta 2B class IIb |
| TUFT1 | tuftelin 1 |
| UGCG | UDP-glucose ceramide glucosyltransferase |
| USP2 | ubiquitin specific peptidase 2 |
| Symbol | Name |
|---|---|
| ADGRG6 | adhesion G protein-coupled receptor G6 |
| ADNP | activity-dependent neuroprotector homeobox |
| ADPRM | ADP-ribose/CDP-alcohol diphosphatase, manganese-dependent |
| AKAP8 | A kinase (PRKA) anchor protein 8 |
| ARHGAP11A | Rho GTPase activating protein 11A |
| ASPSCR1 | alveolar soft part sarcoma chromosome region, candidate 1 |
| BAG2 | BCL2-associated athanogene 2 |
| BCAR3 | breast cancer anti-estrogen resistance 3 |
| BRD1 | bromodomain containing 1 |
| BRIP1 | BRCA1 interacting protein C-terminal helicase 1 |
| CAPN15 | calpain 15 |
| CASD1 | CAS1 domain containing 1 |
| CCDC94 | coiled-coil domain containing 94 |
| CLCF1 | cardiotrophin-like cytokine factor 1 |
| CMAS | cytidine monophosphate N-acetylneuraminic acid synthetase |
| CPEB1 | cytoplasmic polyadenylation element binding protein 1 |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| DCLRE1A | DNA cross-link repair 1A |
| DCTN4 | dynactin 4 (p62) |
| DHX35 | DEAH (Asp-Glu-Ala-His) box polypeptide 35 |
| EOGT | EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase |
| EXOC5 | exocyst complex component 5 |
| FAIM | Fas apoptotic inhibitory molecule |
| FAM57A | family with sequence similarity 57, member A |
| FOXA1 | forkhead box A1 |
| FST | follistatin |
| FZD8 | frizzled class receptor 8 |
| GABPB1 | GA binding protein transcription factor, beta subunit 1 |
| GBX2 | gastrulation brain homeobox 2 |
| GIN1 | gypsy retrotransposon integrase 1 |
| GMEB1 | glucocorticoid modulatory element binding protein 1 |
| GPR176 | G protein-coupled receptor 176 |
| GSTT1 | glutathione S-transferase theta 1 |
| GTF2I | general transcription factor IIi |
| GTPBP2 | GTP binding protein 2 |
| H2AFY2 | H2A histone family, member Y2 |
| HAS2 | hyaluronan synthase 2 |
| HIRIP3 | HIRA interacting protein 3 |
| HMGA2 | high mobility group AT-hook 2 |
| IFIT2 | interferon-induced protein with tetratricopeptide repeats 2 |
| IKZF5 | IKAROS family zinc finger 5 (Pegasus) |
| INHBB | inhibin, beta B |
| KBTBD4 | kelch repeat and BTB (POZ) domain containing 4 |
| KEAP1 | kelch-like ECH-associated protein 1 |
| LIF | leukemia inhibitory factor |
| LMNB1 | lamin B1 |
| LPAR1 | lysophosphatidic acid receptor 1 |
| LUC7L2 | LUC7-like 2 (S. cerevisiae) |
| MBTPS2 | membrane-bound transcription factor peptidase, site 2 |
| MEPCE | methylphosphate capping enzyme |
| METTL4 | methyltransferase like 4 |
| NMI | N-myc (and STAT) interactor |
| NNMT | nicotinamide N-methyltransferase |
| OPA3 | optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia) |
| OSMR | oncostatin M receptor |
| PAGR1 | PAXIP1 associated glutamate-rich protein 1 |
| PARP4 | poly (ADP-ribose) polymerase family, member 4 |
| PHF11 | PHD finger protein 11 |
| PLXNB3 | plexin B3 |
| PPP1R8 | protein phosphatase 1, regulatory subunit 8 |
| PSAT1 | phosphoserine aminotransferase 1 |
| PTK6 | protein tyrosine kinase 6 |
| PTPN9 | protein tyrosine phosphatase, non-receptor type 9 |
| RBM23 | RNA binding motif protein 23 |
| RBM39 | RNA binding motif protein 39 |
| RBM7 | RNA binding motif protein 7 |
| RIN2 | Ras and Rab interactor 2 |
| RWDD3 | RWD domain containing 3 |
| SCAF8 | SR-related CTD-associated factor 8 |
| SERPINH1 | serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) |
| SETD1B | SET domain containing 1B |
| SETD8 | SET domain containing (lysine methyltransferase) 8 |
| SFMBT1 | Scm-like with four mbt domains 1 |
| SIAH1 | siah E3 ubiquitin protein ligase 1 |
| SIM2 | single-minded family bHLH transcription factor 2 |
| SLC14A1 | solute carrier family 14 (urea transporter), member 1 (Kidd blood group) |
| SLC37A1 | solute carrier family 37 (glucose-6-phosphate transporter), member 1 |
| SLC4A3 | solute carrier family 4 (anion exchanger), member 3 |
| SMAGP | small cell adhesion glycoprotein |
| STBD1 | starch binding domain 1 |
| SUV420H1 | suppressor of variegation 4-20 homolog 1 (Drosophila) |
| TCEAL1 | transcription elongation factor A (SII)-like 1 |
| TGFB1I1 | transforming growth factor beta 1 induced transcript 1 |
| TMEM230 | transmembrane protein 230 |
| TNFRSF12A | tumor necrosis factor receptor superfamily, member 12A |
| TRIM13 | tripartite motif containing 13 |
| TRMT2A | tRNA methyltransferase 2 homolog A (S. cerevisiae) |
| TUBGCP3 | tubulin, gamma complex associated protein 3 |
| UBXN8 | UBX domain protein 8 |
| USP21 | ubiquitin specific peptidase 21 |
| VEGFC | vascular endothelial growth factor C |
| WDR74 | WD repeat domain 74 |
| ZBTB1 | zinc finger and BTB domain containing 1 |
| ZBTB14 | zinc finger and BTB domain containing 14 |
| ZFP30 | ZFP30 zinc finger protein |
| ZNF227 | zinc finger protein 227 |
| ZNF692 | zinc finger protein 692 |
| ZNF768 | zinc finger protein 768 |
| ZNF787 | zinc finger protein 787 |
| ZNF804A | zinc finger protein 804A |
