| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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197 genes differentially expressed following the trichostatin A-448 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABCF2 | ATP-binding cassette, sub-family F (GCN20), member 2 |
| ADAP2 | ArfGAP with dual PH domains 2 |
| AGFG2 | ArfGAP with FG repeats 2 |
| AHCYL2 | adenosylhomocysteinase-like 2 |
| ARHGAP26 | Rho GTPase activating protein 26 |
| ASAP3 | ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 |
| ASMTL | acetylserotonin O-methyltransferase-like |
| BAIAP2 | BAI1-associated protein 2 |
| BDNF | brain-derived neurotrophic factor |
| BMPR2 | bone morphogenetic protein receptor, type II (serine/threonine kinase) |
| CA12 | carbonic anhydrase XII |
| CAV3 | caveolin 3 |
| CCNA1 | cyclin A1 |
| CDC42EP3 | CDC42 effector protein (Rho GTPase binding) 3 |
| CFAP69 | cilia and flagella associated protein 69 |
| CHCHD7 | coiled-coil-helix-coiled-coil-helix domain containing 7 |
| CHRNA1 | cholinergic receptor, nicotinic, alpha 1 (muscle) |
| CHRNA3 | cholinergic receptor, nicotinic, alpha 3 (neuronal) |
| CHST7 | carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CTGF | connective tissue growth factor |
| CTIF | CBP80/20-dependent translation initiation factor |
| CYLD | cylindromatosis (turban tumor syndrome) |
| DUSP10 | dual specificity phosphatase 10 |
| DYRK2 | dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 |
| E2F6 | E2F transcription factor 6 |
| ELMO2 | engulfment and cell motility 2 |
| FABP4 | fatty acid binding protein 4, adipocyte |
| FAM134B | family with sequence similarity 134, member B |
| FARP2 | FERM, RhoGEF and pleckstrin domain protein 2 |
| FYN | FYN proto-oncogene, Src family tyrosine kinase |
| GALR3 | galanin receptor 3 |
| GFOD2 | glucose-fructose oxidoreductase domain containing 2 |
| GLS | glutaminase |
| GSK3A | glycogen synthase kinase 3 alpha |
| GUCY1B3 | guanylate cyclase 1, soluble, beta 3 |
| HAPLN2 | hyaluronan and proteoglycan link protein 2 |
| HTR4 | 5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled |
| IL1RAP | interleukin 1 receptor accessory protein |
| INSIG2 | insulin induced gene 2 |
| JUNB | jun B proto-oncogene |
| KCNB2 | potassium channel, voltage gated Shab related subfamily B, member 2 |
| KIF5C | kinesin family member 5C |
| KLF15 | Kruppel-like factor 15 |
| KLK12 | kallikrein-related peptidase 12 |
| LPPR4 | lipid phosphate phosphatase-related protein type 4 |
| LRP6 | low density lipoprotein receptor-related protein 6 |
| LRRC1 | leucine rich repeat containing 1 |
| LUZP1 | leucine zipper protein 1 |
| MAST2 | microtubule associated serine/threonine kinase 2 |
| MEGF9 | multiple EGF-like-domains 9 |
| MFSD12 | major facilitator superfamily domain containing 12 |
| MNAT1 | MNAT CDK-activating kinase assembly factor 1 |
| NEDD9 | neural precursor cell expressed, developmentally down-regulated 9 |
| NEU1 | sialidase 1 (lysosomal sialidase) |
| NFKBIE | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon |
| NIPAL3 | NIPA-like domain containing 3 |
| NXN | nucleoredoxin |
| NXPH4 | neurexophilin 4 |
| PAIP2B | poly(A) binding protein interacting protein 2B |
| PAX3 | paired box 3 |
| PDK2 | pyruvate dehydrogenase kinase, isozyme 2 |
| PDLIM5 | PDZ and LIM domain 5 |
| PHC1 | polyhomeotic homolog 1 (Drosophila) |
| PI4K2A | phosphatidylinositol 4-kinase type 2 alpha |
| PLCB1 | phospholipase C, beta 1 (phosphoinositide-specific) |
| PPM1F | protein phosphatase, Mg2+/Mn2+ dependent, 1F |
| PRB1 | proline-rich protein BstNI subfamily 1 |
| PRKCD | protein kinase C, delta |
| PRSS8 | protease, serine, 8 |
| PSIP1 | PC4 and SFRS1 interacting protein 1 |
| RAB8B | RAB8B, member RAS oncogene family |
| RNF24 | ring finger protein 24 |
| RRP9 | ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast) |
| RTN2 | reticulon 2 |
| SEPW1 | selenoprotein W, 1 |
| SERPINE1 | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 |
| SLC30A5 | solute carrier family 30 (zinc transporter), member 5 |
| SLC38A7 | solute carrier family 38, member 7 |
| SLC9A1 | solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1 |
| SMCHD1 | structural maintenance of chromosomes flexible hinge domain containing 1 |
| SMOX | spermine oxidase |
| SNAPC1 | small nuclear RNA activating complex, polypeptide 1, 43kDa |
| SNPH | syntaphilin |
| SPAM1 | sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding) |
| SSSCA1 | Sjogren syndrome/scleroderma autoantigen 1 |
| STC1 | stanniocalcin 1 |
| STK4 | serine/threonine kinase 4 |
| SYTL2 | synaptotagmin-like 2 |
| TMEM47 | transmembrane protein 47 |
| TNIK | TRAF2 and NCK interacting kinase |
| TNK1 | tyrosine kinase, non-receptor, 1 |
| TRIM62 | tripartite motif containing 62 |
| TSPAN32 | tetraspanin 32 |
| TUFT1 | tuftelin 1 |
| USP20 | ubiquitin specific peptidase 20 |
| WDR91 | WD repeat domain 91 |
| ZNF507 | zinc finger protein 507 |
| Symbol | Name |
|---|---|
| AAAS | achalasia, adrenocortical insufficiency, alacrimia |
| ADNP | activity-dependent neuroprotector homeobox |
| ARHGEF5 | Rho guanine nucleotide exchange factor (GEF) 5 |
| ARSJ | arylsulfatase family, member J |
| ATF1 | activating transcription factor 1 |
| ATF7IP2 | activating transcription factor 7 interacting protein 2 |
| ATG16L1 | autophagy related 16-like 1 (S. cerevisiae) |
| BANP | BTG3 associated nuclear protein |
| BATF3 | basic leucine zipper transcription factor, ATF-like 3 |
| BCAR3 | breast cancer anti-estrogen resistance 3 |
| BCL7A | B-cell CLL/lymphoma 7A |
| C19ORF57 | chromosome 19 open reading frame 57 |
| C1ORF109 | chromosome 1 open reading frame 109 |
| CDIPT | CDP-diacylglycerol--inositol 3-phosphatidyltransferase |
| CHAC1 | ChaC glutathione-specific gamma-glutamylcyclotransferase 1 |
| CLCF1 | cardiotrophin-like cytokine factor 1 |
| CLPB | ClpB homolog, mitochondrial AAA ATPase chaperonin |
| COA7 | cytochrome c oxidase assembly factor 7 (putative) |
| COIL | coilin |
| COMMD8 | COMM domain containing 8 |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| EMC9 | ER membrane protein complex subunit 9 |
| ERMP1 | endoplasmic reticulum metallopeptidase 1 |
| ESM1 | endothelial cell-specific molecule 1 |
| ETV4 | ets variant 4 |
| FADD | Fas (TNFRSF6)-associated via death domain |
| FAF1 | Fas (TNFRSF6) associated factor 1 |
| FOXC1 | forkhead box C1 |
| FST | follistatin |
| GSTZ1 | glutathione S-transferase zeta 1 |
| GUCY1A3 | guanylate cyclase 1, soluble, alpha 3 |
| HAS2 | hyaluronan synthase 2 |
| HIRIP3 | HIRA interacting protein 3 |
| HIVEP2 | human immunodeficiency virus type I enhancer binding protein 2 |
| HMGA2 | high mobility group AT-hook 2 |
| IFIT2 | interferon-induced protein with tetratricopeptide repeats 2 |
| IL15RA | interleukin 15 receptor, alpha |
| INHBB | inhibin, beta B |
| IRF9 | interferon regulatory factor 9 |
| ITPKB | inositol-trisphosphate 3-kinase B |
| KCTD15 | potassium channel tetramerization domain containing 15 |
| KEAP1 | kelch-like ECH-associated protein 1 |
| KIFC1 | kinesin family member C1 |
| LIF | leukemia inhibitory factor |
| LINC00339 | long intergenic non-protein coding RNA 339 |
| LMNB1 | lamin B1 |
| LOC100129361 | |
| LRFN4 | leucine rich repeat and fibronectin type III domain containing 4 |
| LRIF1 | ligand dependent nuclear receptor interacting factor 1 |
| MEPCE | methylphosphate capping enzyme |
| METTL2B | methyltransferase like 2B |
| MTIF2 | mitochondrial translational initiation factor 2 |
| MUC2 | mucin 2, oligomeric mucus/gel-forming |
| NDC80 | NDC80 kinetochore complex component |
| NFE2L2 | nuclear factor, erythroid 2-like 2 |
| NFKBIA | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha |
| NMI | N-myc (and STAT) interactor |
| NPY1R | neuropeptide Y receptor Y1 |
| NSUN5P1 | NOP2/Sun domain family, member 5 pseudogene 1 |
| PAF1 | Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) |
| PAGR1 | PAXIP1 associated glutamate-rich protein 1 |
| PCSK7 | proprotein convertase subtilisin/kexin type 7 |
| PFAS | phosphoribosylformylglycinamidine synthase |
| RBM22 | RNA binding motif protein 22 |
| RBM39 | RNA binding motif protein 39 |
| REXO4 | REX4, RNA exonuclease 4 homolog (S. cerevisiae) |
| RGP1 | RGP1 retrograde golgi transport homolog (S. cerevisiae) |
| RIN2 | Ras and Rab interactor 2 |
| RIPPLY3 | ripply transcriptional repressor 3 |
| RNF220 | ring finger protein 220 |
| RPRD2 | regulation of nuclear pre-mRNA domain containing 2 |
| SCAF8 | SR-related CTD-associated factor 8 |
| SLC17A4 | solute carrier family 17, member 4 |
| SMYD5 | SMYD family member 5 |
| SPOP | speckle-type POZ protein |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| STBD1 | starch binding domain 1 |
| STXBP3 | syntaxin binding protein 3 |
| SUV420H1 | suppressor of variegation 4-20 homolog 1 (Drosophila) |
| SYT2 | synaptotagmin II |
| TGFBRAP1 | transforming growth factor, beta receptor associated protein 1 |
| THUMPD1 | THUMP domain containing 1 |
| TMEM168 | transmembrane protein 168 |
| TNFRSF12A | tumor necrosis factor receptor superfamily, member 12A |
| TRIM5 | tripartite motif containing 5 |
| TSEN2 | TSEN2 tRNA splicing endonuclease subunit |
| TSSC4 | tumor suppressing subtransferable candidate 4 |
| TTC4 | tetratricopeptide repeat domain 4 |
| URGCP | upregulator of cell proliferation |
| USF2 | upstream transcription factor 2, c-fos interacting |
| VEGFC | vascular endothelial growth factor C |
| VWA9 | von Willebrand factor A domain containing 9 |
| WDR13 | WD repeat domain 13 |
| WDR41 | WD repeat domain 41 |
| WNT7A | wingless-type MMTV integration site family, member 7A |
| ZBED1 | zinc finger, BED-type containing 1 |
| ZNF322P1 | zinc finger protein 322 pseudogene 1 |
| ZNF329 | zinc finger protein 329 |
| ZNF652 | zinc finger protein 652 |
