| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
| Downloads & Tools |
200 genes differentially expressed following the trichostatin A-4632 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABAT | 4-aminobutyrate aminotransferase |
| ABCG1 | ATP-binding cassette, sub-family G (WHITE), member 1 |
| ABTB2 | ankyrin repeat and BTB (POZ) domain containing 2 |
| AGTR1 | angiotensin II receptor, type 1 |
| AKR1C2 | aldo-keto reductase family 1, member C2 |
| ANGPTL4 | angiopoietin-like 4 |
| AQP3 | aquaporin 3 (Gill blood group) |
| ARG2 | arginase 2 |
| ARHGAP26 | Rho GTPase activating protein 26 |
| ARL14 | ADP-ribosylation factor-like 14 |
| ARNTL | aryl hydrocarbon receptor nuclear translocator-like |
| ASMTL | acetylserotonin O-methyltransferase-like |
| AVPI1 | arginine vasopressin-induced 1 |
| BAIAP2 | BAI1-associated protein 2 |
| BAMBI | BMP and activin membrane-bound inhibitor |
| BCL6 | B-cell CLL/lymphoma 6 |
| CA5B | carbonic anhydrase VB, mitochondrial |
| CDC42EP3 | CDC42 effector protein (Rho GTPase binding) 3 |
| CFAP69 | cilia and flagella associated protein 69 |
| CITED1 | Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 |
| COBL | cordon-bleu WH2 repeat protein |
| CORO1A | coronin, actin binding protein, 1A |
| CPM | carboxypeptidase M |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CTGF | connective tissue growth factor |
| CTH | cystathionine gamma-lyase |
| CYR61 | cysteine-rich, angiogenic inducer, 61 |
| DENND3 | DENN/MADD domain containing 3 |
| DNAJC12 | DnaJ (Hsp40) homolog, subfamily C, member 12 |
| DUSP1 | dual specificity phosphatase 1 |
| DUSP10 | dual specificity phosphatase 10 |
| DYRK3 | dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 |
| EFNA3 | ephrin-A3 |
| EGR2 | early growth response 2 |
| ELF3 | E74-like factor 3 (ets domain transcription factor, epithelial-specific ) |
| ENTPD7 | ectonucleoside triphosphate diphosphohydrolase 7 |
| EPHB3 | EPH receptor B3 |
| FABP4 | fatty acid binding protein 4, adipocyte |
| FAM134B | family with sequence similarity 134, member B |
| FYN | FYN proto-oncogene, Src family tyrosine kinase |
| GRK5 | G protein-coupled receptor kinase 5 |
| GTF2B | general transcription factor IIB |
| HBEGF | heparin-binding EGF-like growth factor |
| HOXA1 | homeobox A1 |
| IRF6 | interferon regulatory factor 6 |
| JARID2 | jumonji, AT rich interactive domain 2 |
| KCNJ2 | potassium channel, inwardly rectifying subfamily J, member 2 |
| KDM4B | lysine (K)-specific demethylase 4B |
| KIF5C | kinesin family member 5C |
| LIFR | leukemia inhibitory factor receptor alpha |
| LIMA1 | LIM domain and actin binding 1 |
| LMCD1 | LIM and cysteine-rich domains 1 |
| LPPR4 | lipid phosphate phosphatase-related protein type 4 |
| MAP2K3 | mitogen-activated protein kinase kinase 3 |
| MTUS1 | microtubule associated tumor suppressor 1 |
| NEAT1 | nuclear paraspeckle assembly transcript 1 (non-protein coding) |
| NEDD4L | neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase |
| NEDD9 | neural precursor cell expressed, developmentally down-regulated 9 |
| NEU1 | sialidase 1 (lysosomal sialidase) |
| NR4A2 | nuclear receptor subfamily 4, group A, member 2 |
| PCDH9 | protocadherin 9 |
| PDE4DIP | phosphodiesterase 4D interacting protein |
| PDGFRA | platelet-derived growth factor receptor, alpha polypeptide |
| PHLDB1 | pleckstrin homology-like domain, family B, member 1 |
| PKP2 | plakophilin 2 |
| PLEKHF1 | pleckstrin homology domain containing, family F (with FYVE domain) member 1 |
| PLK2 | polo-like kinase 2 |
| PRKAR2B | protein kinase, cAMP-dependent, regulatory, type II, beta |
| PRKCD | protein kinase C, delta |
| PSMB9 | proteasome (prosome, macropain) subunit, beta type, 9 |
| PTCH1 | patched 1 |
| PTGER4 | prostaglandin E receptor 4 (subtype EP4) |
| RAB11FIP1 | RAB11 family interacting protein 1 (class I) |
| RAI2 | retinoic acid induced 2 |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS4 | regulator of G-protein signaling 4 |
| RHOB | ras homolog family member B |
| RNF24 | ring finger protein 24 |
| SAMD4A | sterile alpha motif domain containing 4A |
| SEPP1 | selenoprotein P, plasma, 1 |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SQLE | squalene epoxidase |
| SSBP2 | single-stranded DNA binding protein 2 |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STC1 | stanniocalcin 1 |
| STOM | stomatin |
| STON1 | stonin 1 |
| SYT1 | synaptotagmin I |
| TAGLN3 | transgelin 3 |
| TAOK3 | TAO kinase 3 |
| TAPBP | TAP binding protein (tapasin) |
| TESK2 | testis-specific kinase 2 |
| TNFAIP3 | tumor necrosis factor, alpha-induced protein 3 |
| TNFSF9 | tumor necrosis factor (ligand) superfamily, member 9 |
| TNIK | TRAF2 and NCK interacting kinase |
| TRAFD1 | TRAF-type zinc finger domain containing 1 |
| TUBB2B | tubulin, beta 2B class IIb |
| TUFT1 | tuftelin 1 |
| ZFP36 | ZFP36 ring finger protein |
| Symbol | Name |
|---|---|
| ADNP | activity-dependent neuroprotector homeobox |
| AP4M1 | adaptor-related protein complex 4, mu 1 subunit |
| AP5S1 | adaptor-related protein complex 5, sigma 1 subunit |
| ARAP3 | ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 |
| ATF1 | activating transcription factor 1 |
| BANP | BTG3 associated nuclear protein |
| BCAR3 | breast cancer anti-estrogen resistance 3 |
| C10ORF88 | chromosome 10 open reading frame 88 |
| C19ORF54 | chromosome 19 open reading frame 54 |
| C7ORF69 | chromosome 7 open reading frame 69 |
| CASD1 | CAS1 domain containing 1 |
| CBR3 | carbonyl reductase 3 |
| CDC42EP1 | CDC42 effector protein (Rho GTPase binding) 1 |
| CDC7 | cell division cycle 7 |
| CLCF1 | cardiotrophin-like cytokine factor 1 |
| CLPX | caseinolytic mitochondrial matrix peptidase chaperone subunit |
| COIL | coilin |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| DEPDC1 | DEP domain containing 1 |
| DOLPP1 | dolichyldiphosphatase 1 |
| DUSP4 | dual specificity phosphatase 4 |
| E2F8 | E2F transcription factor 8 |
| EN1 | engrailed homeobox 1 |
| EYA3 | EYA transcriptional coactivator and phosphatase 3 |
| FAM57A | family with sequence similarity 57, member A |
| FJX1 | four jointed box 1 (Drosophila) |
| FOSL1 | FOS-like antigen 1 |
| FOXA1 | forkhead box A1 |
| GABPA | GA binding protein transcription factor, alpha subunit 60kDa |
| GBX2 | gastrulation brain homeobox 2 |
| GLMN | glomulin, FKBP associated protein |
| HAS2 | hyaluronan synthase 2 |
| HIRIP3 | HIRA interacting protein 3 |
| HMGA2 | high mobility group AT-hook 2 |
| HMGXB4 | HMG box domain containing 4 |
| INHBB | inhibin, beta B |
| INPP5E | inositol polyphosphate-5-phosphatase, 72 kDa |
| IRS1 | insulin receptor substrate 1 |
| KAT6B | K(lysine) acetyltransferase 6B |
| KBTBD4 | kelch repeat and BTB (POZ) domain containing 4 |
| KEAP1 | kelch-like ECH-associated protein 1 |
| LIF | leukemia inhibitory factor |
| LMNB1 | lamin B1 |
| LY6G5C | lymphocyte antigen 6 complex, locus G5C |
| MED18 | mediator complex subunit 18 |
| MEPCE | methylphosphate capping enzyme |
| MSL1 | male-specific lethal 1 homolog (Drosophila) |
| NDP | Norrie disease (pseudoglioma) |
| NMI | N-myc (and STAT) interactor |
| NRIP1 | nuclear receptor interacting protein 1 |
| NUP62 | nucleoporin 62kDa |
| OTUB2 | OTU deubiquitinase, ubiquitin aldehyde binding 2 |
| PAK6 | p21 protein (Cdc42/Rac)-activated kinase 6 |
| PLEKHA6 | pleckstrin homology domain containing, family A member 6 |
| PPAN | peter pan homolog (Drosophila) |
| PPAP2B | phosphatidic acid phosphatase type 2B |
| PPCDC | phosphopantothenoylcysteine decarboxylase |
| PPP1R8 | protein phosphatase 1, regulatory subunit 8 |
| RBL1 | retinoblastoma-like 1 |
| RCBTB2 | regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 |
| RCOR3 | REST corepressor 3 |
| RIN2 | Ras and Rab interactor 2 |
| RPRD2 | regulation of nuclear pre-mRNA domain containing 2 |
| SAYSD1 | SAYSVFN motif domain containing 1 |
| SCAF8 | SR-related CTD-associated factor 8 |
| SCN1B | sodium channel, voltage gated, type I beta subunit |
| SETD1B | SET domain containing 1B |
| SLC37A1 | solute carrier family 37 (glucose-6-phosphate transporter), member 1 |
| SLTM | SAFB-like, transcription modulator |
| SMAGP | small cell adhesion glycoprotein |
| SMEK2 | SMEK homolog 2, suppressor of mek1 (Dictyostelium) |
| SMG9 | SMG9 nonsense mediated mRNA decay factor |
| SNHG3 | small nucleolar RNA host gene 3 |
| SNUPN | snurportin 1 |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| STBD1 | starch binding domain 1 |
| STK16 | serine/threonine kinase 16 |
| SUV39H1 | suppressor of variegation 3-9 homolog 1 (Drosophila) |
| TMEM53 | transmembrane protein 53 |
| TOE1 | target of EGR1, member 1 (nuclear) |
| TRIB3 | tribbles pseudokinase 3 |
| TRIM13 | tripartite motif containing 13 |
| TSSC4 | tumor suppressing subtransferable candidate 4 |
| TUBGCP3 | tubulin, gamma complex associated protein 3 |
| UBXN8 | UBX domain protein 8 |
| URGCP | upregulator of cell proliferation |
| USP21 | ubiquitin specific peptidase 21 |
| VEGFC | vascular endothelial growth factor C |
| VWA9 | von Willebrand factor A domain containing 9 |
| ZBED1 | zinc finger, BED-type containing 1 |
| ZC3H4 | zinc finger CCCH-type containing 4 |
| ZFP69B | ZFP69 zinc finger protein B |
| ZNF165 | zinc finger protein 165 |
| ZNF33B | zinc finger protein 33B |
| ZNF562 | zinc finger protein 562 |
| ZNF668 | zinc finger protein 668 |
| ZNF787 | zinc finger protein 787 |
| ZNF804A | zinc finger protein 804A |
| ZNHIT2 | zinc finger, HIT-type containing 2 |
| ZZZ3 | zinc finger, ZZ-type containing 3 |
