| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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197 genes differentially expressed following the trichostatin A-4821 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| AAMDC | adipogenesis associated, Mth938 domain containing |
| ACSBG1 | acyl-CoA synthetase bubblegum family member 1 |
| ADD3 | adducin 3 (gamma) |
| ADM | adrenomedullin |
| AGFG2 | ArfGAP with FG repeats 2 |
| AHNAK2 | AHNAK nucleoprotein 2 |
| ANGPTL4 | angiopoietin-like 4 |
| ARL4C | ADP-ribosylation factor-like 4C |
| ARMCX2 | armadillo repeat containing, X-linked 2 |
| BAIAP3 | BAI1-associated protein 3 |
| C19ORF66 | chromosome 19 open reading frame 66 |
| CA5B | carbonic anhydrase VB, mitochondrial |
| CCDC88A | coiled-coil domain containing 88A |
| CDKN1C | cyclin-dependent kinase inhibitor 1C (p57, Kip2) |
| CDKN2D | cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) |
| CLGN | calmegin |
| CORO1A | coronin, actin binding protein, 1A |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CXADR | coxsackie virus and adenovirus receptor |
| CYP46A1 | cytochrome P450, family 46, subfamily A, polypeptide 1 |
| DHRS2 | dehydrogenase/reductase (SDR family) member 2 |
| DLX2 | distal-less homeobox 2 |
| DNAJC12 | DnaJ (Hsp40) homolog, subfamily C, member 12 |
| DPYSL4 | dihydropyrimidinase-like 4 |
| EFNA3 | ephrin-A3 |
| EFNB3 | ephrin-B3 |
| FAM13A | family with sequence similarity 13, member A |
| FAM46C | family with sequence similarity 46, member C |
| FAM49A | family with sequence similarity 49, member A |
| FKBP1B | FK506 binding protein 1B, 12.6 kDa |
| FSCN1 | fascin actin-bundling protein 1 |
| FYN | FYN proto-oncogene, Src family tyrosine kinase |
| GEM | GTP binding protein overexpressed in skeletal muscle |
| GLDC | glycine dehydrogenase (decarboxylating) |
| GLRX | glutaredoxin (thioltransferase) |
| GRK5 | G protein-coupled receptor kinase 5 |
| GTF2B | general transcription factor IIB |
| HEY1 | hes-related family bHLH transcription factor with YRPW motif 1 |
| HLA-DQB1 | major histocompatibility complex, class II, DQ beta 1 |
| HYAL1 | hyaluronoglucosaminidase 1 |
| IFI6 | interferon, alpha-inducible protein 6 |
| IL21R | interleukin 21 receptor |
| ITM2C | integral membrane protein 2C |
| ITPR1 | inositol 1,4,5-trisphosphate receptor, type 1 |
| KIF13B | kinesin family member 13B |
| KIF21B | kinesin family member 21B |
| LINC00341 | long intergenic non-protein coding RNA 341 |
| LYST | lysosomal trafficking regulator |
| MAST3 | microtubule associated serine/threonine kinase 3 |
| MLXIPL | MLX interacting protein-like |
| MMD | monocyte to macrophage differentiation-associated |
| NAP1L3 | nucleosome assembly protein 1-like 3 |
| NEDD9 | neural precursor cell expressed, developmentally down-regulated 9 |
| NES | nestin |
| NME5 | NME/NM23 family member 5 |
| NXN | nucleoredoxin |
| PAIP2B | poly(A) binding protein interacting protein 2B |
| PCLO | piccolo presynaptic cytomatrix protein |
| PDE4DIP | phosphodiesterase 4D interacting protein |
| PIK3CD | phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta |
| PKNOX2 | PBX/knotted 1 homeobox 2 |
| PLCD1 | phospholipase C, delta 1 |
| PMEL | premelanosome protein |
| PRPH | peripherin |
| RAB11FIP1 | RAB11 family interacting protein 1 (class I) |
| RAI2 | retinoic acid induced 2 |
| RALGPS1 | Ral GEF with PH domain and SH3 binding motif 1 |
| RASGRP2 | RAS guanyl releasing protein 2 (calcium and DAG-regulated) |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS2 | regulator of G-protein signaling 2 |
| RNFT1 | ring finger protein, transmembrane 1 |
| RPL3L | ribosomal protein L3-like |
| RTN2 | reticulon 2 |
| RUNDC3B | RUN domain containing 3B |
| SAT1 | spermidine/spermine N1-acetyltransferase 1 |
| SEPP1 | selenoprotein P, plasma, 1 |
| SERPINB9 | serpin peptidase inhibitor, clade B (ovalbumin), member 9 |
| SERPINE2 | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SIRT4 | sirtuin 4 |
| SLC17A7 | solute carrier family 17 (vesicular glutamate transporter), member 7 |
| SLC30A3 | solute carrier family 30 (zinc transporter), member 3 |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STON1 | stonin 1 |
| STXBP1 | syntaxin binding protein 1 |
| SYT11 | synaptotagmin XI |
| TBXA2R | thromboxane A2 receptor |
| TMSB15A | thymosin beta 15a |
| TUBA4A | tubulin, alpha 4a |
| TUFT1 | tuftelin 1 |
| USP2 | ubiquitin specific peptidase 2 |
| WDR47 | WD repeat domain 47 |
| ZCCHC14 | zinc finger, CCHC domain containing 14 |
| ZCCHC24 | zinc finger, CCHC domain containing 24 |
| ZDHHC11 | zinc finger, DHHC-type containing 11 |
| ZNF204P | zinc finger protein 204, pseudogene |
| Symbol | Name |
|---|---|
| ACKR3 | atypical chemokine receptor 3 |
| ADNP | activity-dependent neuroprotector homeobox |
| AKAP8 | A kinase (PRKA) anchor protein 8 |
| AP5S1 | adaptor-related protein complex 5, sigma 1 subunit |
| ARHGEF16 | Rho guanine nucleotide exchange factor (GEF) 16 |
| ARHGEF5 | Rho guanine nucleotide exchange factor (GEF) 5 |
| ATAD2B | ATPase family, AAA domain containing 2B |
| BCAR3 | breast cancer anti-estrogen resistance 3 |
| BRINP3 | bone morphogenetic protein/retinoic acid inducible neural-specific 3 |
| C11ORF68 | chromosome 11 open reading frame 68 |
| C17ORF75 | chromosome 17 open reading frame 75 |
| C7ORF49 | chromosome 7 open reading frame 49 |
| C9ORF91 | chromosome 9 open reading frame 91 |
| CALHM2 | calcium homeostasis modulator 2 |
| CASD1 | CAS1 domain containing 1 |
| CBFA2T3 | core-binding factor, runt domain, alpha subunit 2; translocated to, 3 |
| CCND1 | cyclin D1 |
| CCNL2 | cyclin L2 |
| COA7 | cytochrome c oxidase assembly factor 7 (putative) |
| COIL | coilin |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| CTDSP1 | CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 |
| CUL1 | cullin 1 |
| DKK1 | dickkopf WNT signaling pathway inhibitor 1 |
| DNAJC7 | DnaJ (Hsp40) homolog, subfamily C, member 7 |
| EFNA1 | ephrin-A1 |
| EGR3 | early growth response 3 |
| FAM57A | family with sequence similarity 57, member A |
| FAM60A | family with sequence similarity 60, member A |
| FJX1 | four jointed box 1 (Drosophila) |
| FOXA1 | forkhead box A1 |
| GABPB1 | GA binding protein transcription factor, beta subunit 1 |
| GMEB1 | glucocorticoid modulatory element binding protein 1 |
| HNRNPF | heterogeneous nuclear ribonucleoprotein F |
| HOXC11 | homeobox C11 |
| INHBB | inhibin, beta B |
| IRS1 | insulin receptor substrate 1 |
| IRX4 | iroquois homeobox 4 |
| IRX5 | iroquois homeobox 5 |
| KEAP1 | kelch-like ECH-associated protein 1 |
| KIAA0125 | KIAA0125 |
| KIF15 | kinesin family member 15 |
| LMNB1 | lamin B1 |
| LTBR | lymphotoxin beta receptor (TNFR superfamily, member 3) |
| LY6G5C | lymphocyte antigen 6 complex, locus G5C |
| MED15 | mediator complex subunit 15 |
| MEPCE | methylphosphate capping enzyme |
| METTL8 | methyltransferase like 8 |
| MMACHC | methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria |
| MPDU1 | mannose-P-dolichol utilization defect 1 |
| MPPED2 | metallophosphoesterase domain containing 2 |
| MSL1 | male-specific lethal 1 homolog (Drosophila) |
| MYC | v-myc avian myelocytomatosis viral oncogene homolog |
| MYD88 | myeloid differentiation primary response 88 |
| NFKB1 | nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 |
| NRIP1 | nuclear receptor interacting protein 1 |
| NSD1 | nuclear receptor binding SET domain protein 1 |
| NSMAF | neutral sphingomyelinase (N-SMase) activation associated factor |
| P2RY6 | pyrimidinergic receptor P2Y, G-protein coupled, 6 |
| PHLDA3 | pleckstrin homology-like domain, family A, member 3 |
| PLK1 | polo-like kinase 1 |
| POGK | pogo transposable element with KRAB domain |
| PPRC1 | peroxisome proliferator-activated receptor gamma, coactivator-related 1 |
| PUS1 | pseudouridylate synthase 1 |
| RASGRP1 | RAS guanyl releasing protein 1 (calcium and DAG-regulated) |
| RASSF1 | Ras association (RalGDS/AF-6) domain family member 1 |
| RRS1 | RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) |
| SCRN1 | secernin 1 |
| SEMA4C | sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C |
| SIDT1 | SID1 transmembrane family, member 1 |
| SKA1 | spindle and kinetochore associated complex subunit 1 |
| SLC25A15 | solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15 |
| SLC29A2 | solute carrier family 29 (equilibrative nucleoside transporter), member 2 |
| SLC35C2 | solute carrier family 35 (GDP-fucose transporter), member C2 |
| SLC35F2 | solute carrier family 35, member F2 |
| SMG9 | SMG9 nonsense mediated mRNA decay factor |
| SNHG20 | small nucleolar RNA host gene 20 |
| SPAG7 | sperm associated antigen 7 |
| SREK1 | splicing regulatory glutamine/lysine-rich protein 1 |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| STC2 | stanniocalcin 2 |
| SYTL2 | synaptotagmin-like 2 |
| TMEM62 | transmembrane protein 62 |
| TRIB3 | tribbles pseudokinase 3 |
| TRMT2A | tRNA methyltransferase 2 homolog A (S. cerevisiae) |
| TRPS1 | trichorhinophalangeal syndrome I |
| TSKU | tsukushi, small leucine rich proteoglycan |
| UBTF | upstream binding transcription factor, RNA polymerase I |
| URGCP | upregulator of cell proliferation |
| XBP1 | X-box binding protein 1 |
| XPO7 | exportin 7 |
| YAP1 | Yes-associated protein 1 |
| ZHX2 | zinc fingers and homeoboxes 2 |
| ZIC1 | Zic family member 1 |
| ZMIZ1 | zinc finger, MIZ-type containing 1 |
| ZNF280D | zinc finger protein 280D |
| ZNF33B | zinc finger protein 33B |
| ZNF668 | zinc finger protein 668 |
| ZNF787 | zinc finger protein 787 |
| ZNHIT2 | zinc finger, HIT-type containing 2 |
