| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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198 genes differentially expressed following the trichostatin A-5209 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ACSBG1 | acyl-CoA synthetase bubblegum family member 1 |
| ADM | adrenomedullin |
| AHNAK2 | AHNAK nucleoprotein 2 |
| ALDOC | aldolase C, fructose-bisphosphate |
| ANG | angiogenin, ribonuclease, RNase A family, 5 |
| ARMCX2 | armadillo repeat containing, X-linked 2 |
| BEX4 | brain expressed, X-linked 4 |
| BMP7 | bone morphogenetic protein 7 |
| CCNG2 | cyclin G2 |
| CDKN1C | cyclin-dependent kinase inhibitor 1C (p57, Kip2) |
| CDKN2D | cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) |
| CEP112 | centrosomal protein 112kDa |
| CLGN | calmegin |
| CORO1A | coronin, actin binding protein, 1A |
| CSRP2 | cysteine and glycine-rich protein 2 |
| CXCR4 | chemokine (C-X-C motif) receptor 4 |
| CYLD | cylindromatosis (turban tumor syndrome) |
| DHRS2 | dehydrogenase/reductase (SDR family) member 2 |
| DIXDC1 | DIX domain containing 1 |
| DLX2 | distal-less homeobox 2 |
| DNAJC12 | DnaJ (Hsp40) homolog, subfamily C, member 12 |
| DNAJC6 | DnaJ (Hsp40) homolog, subfamily C, member 6 |
| DPYSL4 | dihydropyrimidinase-like 4 |
| EFNA3 | ephrin-A3 |
| EFNB3 | ephrin-B3 |
| EGR1 | early growth response 1 |
| ELOVL4 | ELOVL fatty acid elongase 4 |
| EMP1 | epithelial membrane protein 1 |
| ETV5 | ets variant 5 |
| FAM105A | family with sequence similarity 105, member A |
| FKBP1B | FK506 binding protein 1B, 12.6 kDa |
| FSCN1 | fascin actin-bundling protein 1 |
| FYN | FYN proto-oncogene, Src family tyrosine kinase |
| GEM | GTP binding protein overexpressed in skeletal muscle |
| GLRX | glutaredoxin (thioltransferase) |
| GRAMD1C | GRAM domain containing 1C |
| GRK5 | G protein-coupled receptor kinase 5 |
| HEY1 | hes-related family bHLH transcription factor with YRPW motif 1 |
| HSPA2 | heat shock 70kDa protein 2 |
| ITPR1 | inositol 1,4,5-trisphosphate receptor, type 1 |
| JAG1 | jagged 1 |
| KIAA0513 | KIAA0513 |
| KIF5C | kinesin family member 5C |
| LIMA1 | LIM domain and actin binding 1 |
| LINC00341 | long intergenic non-protein coding RNA 341 |
| MAP1B | microtubule-associated protein 1B |
| MAPRE2 | microtubule-associated protein, RP/EB family, member 2 |
| MLF1 | myeloid leukemia factor 1 |
| MMD | monocyte to macrophage differentiation-associated |
| MVP | major vault protein |
| MXRA7 | matrix-remodelling associated 7 |
| NES | nestin |
| NME5 | NME/NM23 family member 5 |
| NXN | nucleoredoxin |
| PADI3 | peptidyl arginine deiminase, type III |
| PAIP2B | poly(A) binding protein interacting protein 2B |
| PBXIP1 | pre-B-cell leukemia homeobox interacting protein 1 |
| PDE4DIP | phosphodiesterase 4D interacting protein |
| PIK3CD | phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta |
| PLLP | plasmolipin |
| PRPH | peripherin |
| PTRF | polymerase I and transcript release factor |
| RAB29 | RAB29, member RAS oncogene family |
| RAI2 | retinoic acid induced 2 |
| RALGPS1 | Ral GEF with PH domain and SH3 binding motif 1 |
| RASGRP2 | RAS guanyl releasing protein 2 (calcium and DAG-regulated) |
| RGCC | regulator of cell cycle |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS2 | regulator of G-protein signaling 2 |
| RNASE4 | ribonuclease, RNase A family, 4 |
| RTN2 | reticulon 2 |
| RUNDC3B | RUN domain containing 3B |
| SEPP1 | selenoprotein P, plasma, 1 |
| SERPINB5 | serpin peptidase inhibitor, clade B (ovalbumin), member 5 |
| SERPINB9 | serpin peptidase inhibitor, clade B (ovalbumin), member 9 |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SFXN3 | sideroflexin 3 |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SIRT4 | sirtuin 4 |
| SLC17A7 | solute carrier family 17 (vesicular glutamate transporter), member 7 |
| SLC1A1 | solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 |
| SORBS1 | sorbin and SH3 domain containing 1 |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STARD5 | StAR-related lipid transfer (START) domain containing 5 |
| STON1 | stonin 1 |
| STXBP1 | syntaxin binding protein 1 |
| TBXA2R | thromboxane A2 receptor |
| TNIK | TRAF2 and NCK interacting kinase |
| TRAFD1 | TRAF-type zinc finger domain containing 1 |
| TTC33 | tetratricopeptide repeat domain 33 |
| ULBP2 | UL16 binding protein 2 |
| WDR19 | WD repeat domain 19 |
| WIPI1 | WD repeat domain, phosphoinositide interacting 1 |
| ZBTB18 | zinc finger and BTB domain containing 18 |
| ZCCHC24 | zinc finger, CCHC domain containing 24 |
| ZDHHC11 | zinc finger, DHHC-type containing 11 |
| ZNF10 | zinc finger protein 10 |
| ZNF204P | zinc finger protein 204, pseudogene |
| Symbol | Name |
|---|---|
| ACKR3 | atypical chemokine receptor 3 |
| ADGRA3 | adhesion G protein-coupled receptor A3 |
| ADNP | activity-dependent neuroprotector homeobox |
| ADRA2C | adrenoceptor alpha 2C |
| AEN | apoptosis enhancing nuclease |
| AKAP8 | A kinase (PRKA) anchor protein 8 |
| AP5S1 | adaptor-related protein complex 5, sigma 1 subunit |
| ARMC6 | armadillo repeat containing 6 |
| ASPSCR1 | alveolar soft part sarcoma chromosome region, candidate 1 |
| BRINP3 | bone morphogenetic protein/retinoic acid inducible neural-specific 3 |
| C9ORF91 | chromosome 9 open reading frame 91 |
| CASD1 | CAS1 domain containing 1 |
| CBFA2T3 | core-binding factor, runt domain, alpha subunit 2; translocated to, 3 |
| CCDC94 | coiled-coil domain containing 94 |
| CCND1 | cyclin D1 |
| CHKB | choline kinase beta |
| COA7 | cytochrome c oxidase assembly factor 7 (putative) |
| COIL | coilin |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| CTDSP1 | CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 |
| CXCL12 | chemokine (C-X-C motif) ligand 12 |
| DCTN4 | dynactin 4 (p62) |
| EGR3 | early growth response 3 |
| EOGT | EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase |
| ESRP2 | epithelial splicing regulatory protein 2 |
| FAM155B | family with sequence similarity 155, member B |
| FAM57A | family with sequence similarity 57, member A |
| FERMT1 | fermitin family member 1 |
| FOXC1 | forkhead box C1 |
| GABPB1 | GA binding protein transcription factor, beta subunit 1 |
| GLMN | glomulin, FKBP associated protein |
| GMEB1 | glucocorticoid modulatory element binding protein 1 |
| GPR87 | G protein-coupled receptor 87 |
| GTF2I | general transcription factor IIi |
| HEATR3 | HEAT repeat containing 3 |
| HMGB3 | high mobility group box 3 |
| INHBB | inhibin, beta B |
| IRX5 | iroquois homeobox 5 |
| KAT6B | K(lysine) acetyltransferase 6B |
| KEAP1 | kelch-like ECH-associated protein 1 |
| KIAA0125 | KIAA0125 |
| LMNB1 | lamin B1 |
| LPAR2 | lysophosphatidic acid receptor 2 |
| LRFN4 | leucine rich repeat and fibronectin type III domain containing 4 |
| LY6G5C | lymphocyte antigen 6 complex, locus G5C |
| MAP3K2 | mitogen-activated protein kinase kinase kinase 2 |
| MBTD1 | mbt domain containing 1 |
| MCM9 | minichromosome maintenance complex component 9 |
| MEPCE | methylphosphate capping enzyme |
| METTL1 | methyltransferase like 1 |
| METTL8 | methyltransferase like 8 |
| MPDU1 | mannose-P-dolichol utilization defect 1 |
| MPPED2 | metallophosphoesterase domain containing 2 |
| MSL1 | male-specific lethal 1 homolog (Drosophila) |
| MTHFS | 5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase) |
| MYC | v-myc avian myelocytomatosis viral oncogene homolog |
| NHEJ1 | nonhomologous end-joining factor 1 |
| NMI | N-myc (and STAT) interactor |
| NPY1R | neuropeptide Y receptor Y1 |
| NR1D2 | nuclear receptor subfamily 1, group D, member 2 |
| NSMAF | neutral sphingomyelinase (N-SMase) activation associated factor |
| NUAK1 | NUAK family, SNF1-like kinase, 1 |
| P2RY6 | pyrimidinergic receptor P2Y, G-protein coupled, 6 |
| PCDHA6 | protocadherin alpha 6 |
| PCNT | pericentrin |
| PGGT1B | protein geranylgeranyltransferase type I, beta subunit |
| PIK3R1 | phosphoinositide-3-kinase, regulatory subunit 1 (alpha) |
| POGK | pogo transposable element with KRAB domain |
| PPCS | phosphopantothenoylcysteine synthetase |
| RASGRP1 | RAS guanyl releasing protein 1 (calcium and DAG-regulated) |
| RBM23 | RNA binding motif protein 23 |
| SARS2 | seryl-tRNA synthetase 2, mitochondrial |
| SEMA4C | sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C |
| SETD8 | SET domain containing (lysine methyltransferase) 8 |
| SFMBT1 | Scm-like with four mbt domains 1 |
| SH2D4A | SH2 domain containing 4A |
| SMEK1 | SMEK homolog 1, suppressor of mek1 (Dictyostelium) |
| SMEK2 | SMEK homolog 2, suppressor of mek1 (Dictyostelium) |
| SMG9 | SMG9 nonsense mediated mRNA decay factor |
| SREK1 | splicing regulatory glutamine/lysine-rich protein 1 |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| STAG1 | stromal antigen 1 |
| STC2 | stanniocalcin 2 |
| SUV420H1 | suppressor of variegation 4-20 homolog 1 (Drosophila) |
| TCTN2 | tectonic family member 2 |
| THOC6 | THO complex 6 |
| TOE1 | target of EGR1, member 1 (nuclear) |
| TRIB3 | tribbles pseudokinase 3 |
| TRIM8 | tripartite motif containing 8 |
| TRPS1 | trichorhinophalangeal syndrome I |
| UBXN8 | UBX domain protein 8 |
| USP16 | ubiquitin specific peptidase 16 |
| USP21 | ubiquitin specific peptidase 21 |
| XBP1 | X-box binding protein 1 |
| YAP1 | Yes-associated protein 1 |
| ZHX2 | zinc fingers and homeoboxes 2 |
| ZIC1 | Zic family member 1 |
| ZMIZ1 | zinc finger, MIZ-type containing 1 |
| ZNF573 | zinc finger protein 573 |
| ZNF692 | zinc finger protein 692 |
