| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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200 genes differentially expressed following the trichostatin A-5484 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ACSBG1 | acyl-CoA synthetase bubblegum family member 1 |
| ACSF2 | acyl-CoA synthetase family member 2 |
| ADD3 | adducin 3 (gamma) |
| ADM | adrenomedullin |
| AHNAK2 | AHNAK nucleoprotein 2 |
| BAIAP2 | BAI1-associated protein 2 |
| CCDC28A | coiled-coil domain containing 28A |
| CDKN1C | cyclin-dependent kinase inhibitor 1C (p57, Kip2) |
| CEP104 | centrosomal protein 104kDa |
| CLGN | calmegin |
| CLMN | calmin (calponin-like, transmembrane) |
| CORO1A | coronin, actin binding protein, 1A |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CSRP2 | cysteine and glycine-rich protein 2 |
| CXADR | coxsackie virus and adenovirus receptor |
| CYLD | cylindromatosis (turban tumor syndrome) |
| CYP46A1 | cytochrome P450, family 46, subfamily A, polypeptide 1 |
| DHRS2 | dehydrogenase/reductase (SDR family) member 2 |
| DNAJC12 | DnaJ (Hsp40) homolog, subfamily C, member 12 |
| DNAJC6 | DnaJ (Hsp40) homolog, subfamily C, member 6 |
| DPYSL4 | dihydropyrimidinase-like 4 |
| EFNB3 | ephrin-B3 |
| EPOR | erythropoietin receptor |
| ETV5 | ets variant 5 |
| EVI5 | ecotropic viral integration site 5 |
| FAM105A | family with sequence similarity 105, member A |
| FAM13A | family with sequence similarity 13, member A |
| FKBP1B | FK506 binding protein 1B, 12.6 kDa |
| FSCN1 | fascin actin-bundling protein 1 |
| FYN | FYN proto-oncogene, Src family tyrosine kinase |
| GEM | GTP binding protein overexpressed in skeletal muscle |
| GFPT2 | glutamine-fructose-6-phosphate transaminase 2 |
| GLDC | glycine dehydrogenase (decarboxylating) |
| GLRX | glutaredoxin (thioltransferase) |
| GLS | glutaminase |
| GRK5 | G protein-coupled receptor kinase 5 |
| GTF2B | general transcription factor IIB |
| H1F0 | H1 histone family, member 0 |
| HEY1 | hes-related family bHLH transcription factor with YRPW motif 1 |
| HSD17B11 | hydroxysteroid (17-beta) dehydrogenase 11 |
| HSPA2 | heat shock 70kDa protein 2 |
| JAKMIP2 | janus kinase and microtubule interacting protein 2 |
| KIAA0355 | KIAA0355 |
| KIAA0513 | KIAA0513 |
| KIF5C | kinesin family member 5C |
| LIMA1 | LIM domain and actin binding 1 |
| LINC00341 | long intergenic non-protein coding RNA 341 |
| LPCAT3 | lysophosphatidylcholine acyltransferase 3 |
| LYST | lysosomal trafficking regulator |
| MAP1B | microtubule-associated protein 1B |
| MAP1LC3B | microtubule-associated protein 1 light chain 3 beta |
| MARK4 | MAP/microtubule affinity-regulating kinase 4 |
| MAST3 | microtubule associated serine/threonine kinase 3 |
| MLF1 | myeloid leukemia factor 1 |
| MMD | monocyte to macrophage differentiation-associated |
| MXRA7 | matrix-remodelling associated 7 |
| NAP1L3 | nucleosome assembly protein 1-like 3 |
| NES | nestin |
| NME5 | NME/NM23 family member 5 |
| NPC1 | Niemann-Pick disease, type C1 |
| NRTN | neurturin |
| NXN | nucleoredoxin |
| OASL | 2'-5'-oligoadenylate synthetase-like |
| PEX11A | peroxisomal biogenesis factor 11 alpha |
| PIK3CD | phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta |
| PLCG2 | phospholipase C, gamma 2 (phosphatidylinositol-specific) |
| PLLP | plasmolipin |
| PRPH | peripherin |
| RAB11FIP1 | RAB11 family interacting protein 1 (class I) |
| RAI2 | retinoic acid induced 2 |
| RALGPS1 | Ral GEF with PH domain and SH3 binding motif 1 |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS2 | regulator of G-protein signaling 2 |
| RPS6KA5 | ribosomal protein S6 kinase, 90kDa, polypeptide 5 |
| RUNDC3B | RUN domain containing 3B |
| SAT1 | spermidine/spermine N1-acetyltransferase 1 |
| SEPP1 | selenoprotein P, plasma, 1 |
| SERPINB9 | serpin peptidase inhibitor, clade B (ovalbumin), member 9 |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SIRT4 | sirtuin 4 |
| SOX9 | SRY (sex determining region Y)-box 9 |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| STON1 | stonin 1 |
| SWAP70 | SWAP switching B-cell complex 70kDa subunit |
| SYT11 | synaptotagmin XI |
| TBXA2R | thromboxane A2 receptor |
| TMSB15A | thymosin beta 15a |
| TRIM2 | tripartite motif containing 2 |
| TRIM52 | tripartite motif containing 52 |
| TUBA4A | tubulin, alpha 4a |
| TUFT1 | tuftelin 1 |
| TXNIP | thioredoxin interacting protein |
| UNC119 | unc-119 homolog (C. elegans) |
| WDR47 | WD repeat domain 47 |
| WIPI1 | WD repeat domain, phosphoinositide interacting 1 |
| ZCCHC24 | zinc finger, CCHC domain containing 24 |
| ZDHHC11 | zinc finger, DHHC-type containing 11 |
| ZNF10 | zinc finger protein 10 |
| ZNF204P | zinc finger protein 204, pseudogene |
| Symbol | Name |
|---|---|
| ACKR3 | atypical chemokine receptor 3 |
| ADNP | activity-dependent neuroprotector homeobox |
| AEN | apoptosis enhancing nuclease |
| AKAP8 | A kinase (PRKA) anchor protein 8 |
| AP5S1 | adaptor-related protein complex 5, sigma 1 subunit |
| BANP | BTG3 associated nuclear protein |
| BATF | basic leucine zipper transcription factor, ATF-like |
| BCAR3 | breast cancer anti-estrogen resistance 3 |
| BRINP3 | bone morphogenetic protein/retinoic acid inducible neural-specific 3 |
| C9ORF91 | chromosome 9 open reading frame 91 |
| CBFA2T3 | core-binding factor, runt domain, alpha subunit 2; translocated to, 3 |
| CCDC94 | coiled-coil domain containing 94 |
| CCND1 | cyclin D1 |
| CLDN9 | claudin 9 |
| COA7 | cytochrome c oxidase assembly factor 7 (putative) |
| COIL | coilin |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| CTDSP1 | CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 |
| CYP1A1 | cytochrome P450, family 1, subfamily A, polypeptide 1 |
| DENND2D | DENN/MADD domain containing 2D |
| DKK1 | dickkopf WNT signaling pathway inhibitor 1 |
| DNAJC7 | DnaJ (Hsp40) homolog, subfamily C, member 7 |
| E2F3 | E2F transcription factor 3 |
| EFNA1 | ephrin-A1 |
| EGR3 | early growth response 3 |
| EOGT | EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase |
| ERN2 | endoplasmic reticulum to nucleus signaling 2 |
| FAM57A | family with sequence similarity 57, member A |
| FJX1 | four jointed box 1 (Drosophila) |
| GABPB1 | GA binding protein transcription factor, beta subunit 1 |
| GATA3 | GATA binding protein 3 |
| GMEB1 | glucocorticoid modulatory element binding protein 1 |
| GTF2IRD1 | GTF2I repeat domain containing 1 |
| IL15RA | interleukin 15 receptor, alpha |
| INHBB | inhibin, beta B |
| IRS1 | insulin receptor substrate 1 |
| IRX5 | iroquois homeobox 5 |
| KEAP1 | kelch-like ECH-associated protein 1 |
| LMNB2 | lamin B2 |
| LRFN4 | leucine rich repeat and fibronectin type III domain containing 4 |
| LUC7L2 | LUC7-like 2 (S. cerevisiae) |
| LY6G5C | lymphocyte antigen 6 complex, locus G5C |
| MCM9 | minichromosome maintenance complex component 9 |
| MEPCE | methylphosphate capping enzyme |
| METTL1 | methyltransferase like 1 |
| METTL8 | methyltransferase like 8 |
| MON1B | MON1 secretory trafficking family member B |
| MRM1 | mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae) |
| MSL1 | male-specific lethal 1 homolog (Drosophila) |
| MYC | v-myc avian myelocytomatosis viral oncogene homolog |
| N6AMT1 | N-6 adenine-specific DNA methyltransferase 1 (putative) |
| NHEJ1 | nonhomologous end-joining factor 1 |
| NME6 | NME/NM23 nucleoside diphosphate kinase 6 |
| NPY5R | neuropeptide Y receptor Y5 |
| NRIP1 | nuclear receptor interacting protein 1 |
| NSD1 | nuclear receptor binding SET domain protein 1 |
| NSMAF | neutral sphingomyelinase (N-SMase) activation associated factor |
| NUAK1 | NUAK family, SNF1-like kinase, 1 |
| NUP62 | nucleoporin 62kDa |
| PDGFA | platelet-derived growth factor alpha polypeptide |
| PHLDA3 | pleckstrin homology-like domain, family A, member 3 |
| POGK | pogo transposable element with KRAB domain |
| PPAN | peter pan homolog (Drosophila) |
| PPP1R8 | protein phosphatase 1, regulatory subunit 8 |
| PRR15L | proline rich 15-like |
| PRR3 | proline rich 3 |
| PTCD2 | pentatricopeptide repeat domain 2 |
| RASGRP1 | RAS guanyl releasing protein 1 (calcium and DAG-regulated) |
| SARS2 | seryl-tRNA synthetase 2, mitochondrial |
| SCN1B | sodium channel, voltage gated, type I beta subunit |
| SFMBT1 | Scm-like with four mbt domains 1 |
| SLC25A38 | solute carrier family 25, member 38 |
| SLC29A2 | solute carrier family 29 (equilibrative nucleoside transporter), member 2 |
| SMG9 | SMG9 nonsense mediated mRNA decay factor |
| SNHG3 | small nucleolar RNA host gene 3 |
| SREK1 | splicing regulatory glutamine/lysine-rich protein 1 |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| ST3GAL1 | ST3 beta-galactoside alpha-2,3-sialyltransferase 1 |
| STC2 | stanniocalcin 2 |
| TBL1XR1 | transducin (beta)-like 1 X-linked receptor 1 |
| TGIF1 | TGFB-induced factor homeobox 1 |
| TMEM223 | transmembrane protein 223 |
| TRAF5 | TNF receptor-associated factor 5 |
| TRIB3 | tribbles pseudokinase 3 |
| TRIM16 | tripartite motif containing 16 |
| TRIM8 | tripartite motif containing 8 |
| TRMU | tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase |
| TRPS1 | trichorhinophalangeal syndrome I |
| TSKU | tsukushi, small leucine rich proteoglycan |
| USP5 | ubiquitin specific peptidase 5 (isopeptidase T) |
| VWA9 | von Willebrand factor A domain containing 9 |
| WDR74 | WD repeat domain 74 |
| XBP1 | X-box binding protein 1 |
| YAP1 | Yes-associated protein 1 |
| ZHX2 | zinc fingers and homeoboxes 2 |
| ZIC1 | Zic family member 1 |
| ZMIZ1 | zinc finger, MIZ-type containing 1 |
| ZNF239 | zinc finger protein 239 |
| ZNF254 | zinc finger protein 254 |
| ZNF668 | zinc finger protein 668 |
