| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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200 genes differentially expressed following the trichostatin A-5908 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| ABAT | 4-aminobutyrate aminotransferase |
| ABCG1 | ATP-binding cassette, sub-family G (WHITE), member 1 |
| ACOT7 | acyl-CoA thioesterase 7 |
| AGTR1 | angiotensin II receptor, type 1 |
| AHR | aryl hydrocarbon receptor |
| AMDHD2 | amidohydrolase domain containing 2 |
| ANGPTL4 | angiopoietin-like 4 |
| AQP3 | aquaporin 3 (Gill blood group) |
| ARG2 | arginase 2 |
| ARNTL | aryl hydrocarbon receptor nuclear translocator-like |
| ASAP3 | ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 |
| ASMTL | acetylserotonin O-methyltransferase-like |
| AVPI1 | arginine vasopressin-induced 1 |
| BAIAP2 | BAI1-associated protein 2 |
| BAMBI | BMP and activin membrane-bound inhibitor |
| BCL6 | B-cell CLL/lymphoma 6 |
| C1QL1 | complement component 1, q subcomponent-like 1 |
| C5ORF45 | chromosome 5 open reading frame 45 |
| CA5B | carbonic anhydrase VB, mitochondrial |
| CD70 | CD70 molecule |
| CDC42EP3 | CDC42 effector protein (Rho GTPase binding) 3 |
| CDKN1A | cyclin-dependent kinase inhibitor 1A (p21, Cip1) |
| CORO1A | coronin, actin binding protein, 1A |
| CPM | carboxypeptidase M |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CTGF | connective tissue growth factor |
| CTH | cystathionine gamma-lyase |
| CXCR4 | chemokine (C-X-C motif) receptor 4 |
| CYP46A1 | cytochrome P450, family 46, subfamily A, polypeptide 1 |
| DENND3 | DENN/MADD domain containing 3 |
| DNAJB1 | DnaJ (Hsp40) homolog, subfamily B, member 1 |
| DUSP1 | dual specificity phosphatase 1 |
| DUSP10 | dual specificity phosphatase 10 |
| EFNA3 | ephrin-A3 |
| ELF3 | E74-like factor 3 (ets domain transcription factor, epithelial-specific ) |
| ELOVL4 | ELOVL fatty acid elongase 4 |
| EPPK1 | epiplakin 1 |
| FABP4 | fatty acid binding protein 4, adipocyte |
| FAM134B | family with sequence similarity 134, member B |
| FARP2 | FERM, RhoGEF and pleckstrin domain protein 2 |
| FBXW7 | F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase |
| GCDH | glutaryl-CoA dehydrogenase |
| GFPT2 | glutamine-fructose-6-phosphate transaminase 2 |
| GLS | glutaminase |
| GMPR | guanosine monophosphate reductase |
| ID4 | inhibitor of DNA binding 4, dominant negative helix-loop-helix protein |
| IL11 | interleukin 11 |
| INSIG1 | insulin induced gene 1 |
| IRF6 | interferon regulatory factor 6 |
| JUNB | jun B proto-oncogene |
| KCNJ2 | potassium channel, inwardly rectifying subfamily J, member 2 |
| KIF5C | kinesin family member 5C |
| LIPE | lipase, hormone-sensitive |
| LMCD1 | LIM and cysteine-rich domains 1 |
| LPPR4 | lipid phosphate phosphatase-related protein type 4 |
| LTB4R | leukotriene B4 receptor |
| MAPRE2 | microtubule-associated protein, RP/EB family, member 2 |
| MAPT | microtubule-associated protein tau |
| MERTK | MER proto-oncogene, tyrosine kinase |
| MMP1 | matrix metallopeptidase 1 |
| MOCS3 | molybdenum cofactor synthesis 3 |
| NEAT1 | nuclear paraspeckle assembly transcript 1 (non-protein coding) |
| NEU1 | sialidase 1 (lysosomal sialidase) |
| NPC1 | Niemann-Pick disease, type C1 |
| OASL | 2'-5'-oligoadenylate synthetase-like |
| PCDH17 | protocadherin 17 |
| PDE4DIP | phosphodiesterase 4D interacting protein |
| PELI1 | pellino E3 ubiquitin protein ligase 1 |
| PKP2 | plakophilin 2 |
| PLXNA3 | plexin A3 |
| RAB11FIP1 | RAB11 family interacting protein 1 (class I) |
| RGCC | regulator of cell cycle |
| RGL1 | ral guanine nucleotide dissociation stimulator-like 1 |
| RGS17 | regulator of G-protein signaling 17 |
| RGS4 | regulator of G-protein signaling 4 |
| RND1 | Rho family GTPase 1 |
| RNF24 | ring finger protein 24 |
| SAT1 | spermidine/spermine N1-acetyltransferase 1 |
| SELPLG | selectin P ligand |
| SERPINE1 | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 |
| SERPINI1 | serpin peptidase inhibitor, clade I (neuroserpin), member 1 |
| SH3GL2 | SH3-domain GRB2-like 2 |
| SH3GL3 | SH3-domain GRB2-like 3 |
| SLC30A1 | solute carrier family 30 (zinc transporter), member 1 |
| SNAP23 | synaptosomal-associated protein, 23kDa |
| SORBS1 | sorbin and SH3 domain containing 1 |
| SPSB3 | splA/ryanodine receptor domain and SOCS box containing 3 |
| ST3GAL5 | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 |
| ST6GALNAC4 | ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 |
| STARD5 | StAR-related lipid transfer (START) domain containing 5 |
| STC1 | stanniocalcin 1 |
| SYT1 | synaptotagmin I |
| SYT11 | synaptotagmin XI |
| TAOK3 | TAO kinase 3 |
| THEMIS2 | thymocyte selection associated family member 2 |
| TJP3 | tight junction protein 3 |
| TRAIP | TRAF interacting protein |
| TUBB2B | tubulin, beta 2B class IIb |
| TUFT1 | tuftelin 1 |
| URB1 | URB1 ribosome biogenesis 1 homolog (S. cerevisiae) |
| Symbol | Name |
|---|---|
| ADGRG6 | adhesion G protein-coupled receptor G6 |
| ADNP | activity-dependent neuroprotector homeobox |
| ARSJ | arylsulfatase family, member J |
| ASPSCR1 | alveolar soft part sarcoma chromosome region, candidate 1 |
| BCAR3 | breast cancer anti-estrogen resistance 3 |
| C19ORF40 | chromosome 19 open reading frame 40 |
| C19ORF54 | chromosome 19 open reading frame 54 |
| C7ORF49 | chromosome 7 open reading frame 49 |
| C9ORF40 | chromosome 9 open reading frame 40 |
| CASD1 | CAS1 domain containing 1 |
| CBR3 | carbonyl reductase 3 |
| CCNJ | cyclin J |
| CDC7 | cell division cycle 7 |
| CHRNA6 | cholinergic receptor, nicotinic, alpha 6 (neuronal) |
| CLCF1 | cardiotrophin-like cytokine factor 1 |
| CTCF | CCCTC-binding factor (zinc finger protein) |
| CTDSP1 | CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 |
| CUL1 | cullin 1 |
| CYP20A1 | cytochrome P450, family 20, subfamily A, polypeptide 1 |
| CYP2J2 | cytochrome P450, family 2, subfamily J, polypeptide 2 |
| DEPDC1 | DEP domain containing 1 |
| FJX1 | four jointed box 1 (Drosophila) |
| FOSL1 | FOS-like antigen 1 |
| FOXA1 | forkhead box A1 |
| FOXC1 | forkhead box C1 |
| FRS3 | fibroblast growth factor receptor substrate 3 |
| FST | follistatin |
| GABPB1 | GA binding protein transcription factor, beta subunit 1 |
| GPR87 | G protein-coupled receptor 87 |
| GPRIN2 | G protein regulated inducer of neurite outgrowth 2 |
| H2AFY2 | H2A histone family, member Y2 |
| HAS2 | hyaluronan synthase 2 |
| HDAC7 | histone deacetylase 7 |
| HIST1H4E | histone cluster 1, H4e |
| HMGA2 | high mobility group AT-hook 2 |
| HOXA2 | homeobox A2 |
| HOXA4 | homeobox A4 |
| INHBB | inhibin, beta B |
| IRS1 | insulin receptor substrate 1 |
| KAT6B | K(lysine) acetyltransferase 6B |
| KCNN4 | potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 4 |
| KCTD17 | potassium channel tetramerization domain containing 17 |
| KDM8 | lysine (K)-specific demethylase 8 |
| KEAP1 | kelch-like ECH-associated protein 1 |
| KIAA1107 | KIAA1107 |
| KIF14 | kinesin family member 14 |
| KIRREL | kin of IRRE like (Drosophila) |
| LIF | leukemia inhibitory factor |
| LMNB1 | lamin B1 |
| LPAR1 | lysophosphatidic acid receptor 1 |
| LUC7L2 | LUC7-like 2 (S. cerevisiae) |
| LY6G5C | lymphocyte antigen 6 complex, locus G5C |
| MEPCE | methylphosphate capping enzyme |
| MRPL44 | mitochondrial ribosomal protein L44 |
| MTRF1 | mitochondrial translational release factor 1 |
| NDP | Norrie disease (pseudoglioma) |
| NHEJ1 | nonhomologous end-joining factor 1 |
| NMI | N-myc (and STAT) interactor |
| NRIP1 | nuclear receptor interacting protein 1 |
| NSD1 | nuclear receptor binding SET domain protein 1 |
| P2RY6 | pyrimidinergic receptor P2Y, G-protein coupled, 6 |
| PALMD | palmdelphin |
| PAN2 | PAN2 poly(A) specific ribonuclease subunit |
| PPAP2B | phosphatidic acid phosphatase type 2B |
| PSMD7 | proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 |
| PTPN9 | protein tyrosine phosphatase, non-receptor type 9 |
| RBM4B | RNA binding motif protein 4B |
| RIN2 | Ras and Rab interactor 2 |
| RPRD2 | regulation of nuclear pre-mRNA domain containing 2 |
| SERPINH1 | serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) |
| SETD1B | SET domain containing 1B |
| SFMBT1 | Scm-like with four mbt domains 1 |
| SH3TC2 | SH3 domain and tetratricopeptide repeats 2 |
| SIM2 | single-minded family bHLH transcription factor 2 |
| SLC12A8 | solute carrier family 12, member 8 |
| SLC37A1 | solute carrier family 37 (glucose-6-phosphate transporter), member 1 |
| SMAGP | small cell adhesion glycoprotein |
| SMARCAL1 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 |
| SMPDL3A | sphingomyelin phosphodiesterase, acid-like 3A |
| SOGA1 | suppressor of glucose, autophagy associated 1 |
| SRSF4 | serine/arginine-rich splicing factor 4 |
| SUV39H1 | suppressor of variegation 3-9 homolog 1 (Drosophila) |
| TGFB1I1 | transforming growth factor beta 1 induced transcript 1 |
| TMC5 | transmembrane channel-like 5 |
| TMEM121 | transmembrane protein 121 |
| TRIB3 | tribbles pseudokinase 3 |
| TRMT2A | tRNA methyltransferase 2 homolog A (S. cerevisiae) |
| UBTF | upstream binding transcription factor, RNA polymerase I |
| VEGFC | vascular endothelial growth factor C |
| VN1R1 | vomeronasal 1 receptor 1 |
| ZBED1 | zinc finger, BED-type containing 1 |
| ZBTB1 | zinc finger and BTB domain containing 1 |
| ZC3H4 | zinc finger CCCH-type containing 4 |
| ZNF165 | zinc finger protein 165 |
| ZNF215 | zinc finger protein 215 |
| ZNF227 | zinc finger protein 227 |
| ZNF33B | zinc finger protein 33B |
| ZNF446 | zinc finger protein 446 |
| ZNF76 | zinc finger protein 76 |
| ZSCAN31 | zinc finger and SCAN domain containing 31 |
